Experiment set8IT079 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20350 -10.1 -7.0 amidophosphoribosyltransferase compare
BWI76_RS18950 -9.1 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20895 -8.3 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04675 -8.3 -8.1 3-isopropylmalate dehydrogenase compare
BWI76_RS21475 -8.1 -7.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04255 -8.0 -7.8 threonine synthase compare
BWI76_RS27385 -8.0 -5.5 orotate phosphoribosyltransferase compare
BWI76_RS02995 -7.9 -9.4 aspartate carbamoyltransferase compare
BWI76_RS18930 -7.7 -4.3 histidinol-phosphate transaminase compare
BWI76_RS05835 -7.6 -5.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS07065 -7.4 -8.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18955 -7.4 -6.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00855 -7.4 -10.1 argininosuccinate lyase compare
BWI76_RS11965 -7.3 -5.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25115 -7.3 -10.0 argininosuccinate synthase compare
BWI76_RS20355 -7.2 -4.0 colicin V production protein compare
BWI76_RS23920 -7.2 -6.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00785 -7.2 -7.0 cystathionine gamma-synthase compare
BWI76_RS08385 -7.2 -4.1 citrate (Si)-synthase compare
BWI76_RS18925 -7.2 -8.2 histidinol dehydrogenase compare
BWI76_RS04465 -7.1 -7.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00850 -6.8 -9.3 acetylglutamate kinase compare
BWI76_RS00985 -6.8 -9.4 transcriptional regulator IlvY compare
BWI76_RS09755 -6.8 -8.1 phosphoserine transaminase compare
BWI76_RS07070 -6.7 -6.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS10990 -6.7 -3.9 dihydroorotase compare
BWI76_RS24285 -6.6 -10.1 cystathionine beta-lyase compare
BWI76_RS26085 -6.6 -4.5 3-dehydroquinate synthase compare
BWI76_RS21265 -6.6 -13.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00980 -6.6 -14.0 PLP-dependent threonine dehydratase compare
BWI76_RS20965 -6.3 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04250 -6.3 -7.4 homoserine kinase compare
BWI76_RS04245 -6.3 -17.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00990 -6.2 -9.0 ketol-acid reductoisomerase compare
BWI76_RS04665 -6.1 -19.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01615 -6.1 -10.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS01655 -6.0 -8.3 homoserine O-succinyltransferase compare
BWI76_RS23220 -6.0 -10.9 amino-acid N-acetyltransferase compare
BWI76_RS23360 -6.0 -5.8 diaminopimelate decarboxylase compare
BWI76_RS04510 -6.0 -4.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00835 -6.0 -12.1 phosphoenolpyruvate carboxylase compare
BWI76_RS18920 -5.9 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS04670 -5.9 -8.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00975 -5.9 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS18935 -5.9 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11860 -5.8 -8.6 anthranilate synthase component I compare
BWI76_RS04470 -5.8 -11.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS23365 -5.8 -7.9 LysR family transcriptional regulator compare
BWI76_RS04645 -5.7 -6.3 3-dehydroquinase compare
BWI76_RS00965 -5.7 -2.2 acetolactate synthase 2 small subunit compare
BWI76_RS09910 -5.6 -15.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04685 -5.5 -8.6 putative leucine operon leader peptide compare
BWI76_RS27390 -5.5 -5.6 ribonuclease PH compare
BWI76_RS18940 -5.4 -6.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS22755 -5.4 -10.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS11855 -5.4 -6.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04160 -5.4 -7.0 phosphoserine phosphatase compare
BWI76_RS00845 -5.3 -8.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11845 -5.3 -2.1 tryptophan synthase subunit beta compare
BWI76_RS26570 -5.3 -5.1 anion permease compare
BWI76_RS11850 -5.2 -9.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS03010 -5.2 -8.6 ornithine carbamoyltransferase compare
BWI76_RS05840 -5.2 -5.0 glutamate 5-kinase compare
BWI76_RS00805 -5.1 -5.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS01610 -5.0 -4.8 phosphoribosylamine--glycine ligase compare
BWI76_RS22760 -4.8 -9.1 sulfite reductase subunit beta compare
BWI76_RS13920 -4.8 -7.9 magnesium-translocating P-type ATPase compare
BWI76_RS02735 -4.8 -6.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22765 -4.8 -12.7 sulfite reductase subunit alpha compare
BWI76_RS00400 -4.8 -3.2 glutamine synthetase compare
BWI76_RS09645 -4.8 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS09760 -4.7 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25645 -4.7 -10.6 shikimate dehydrogenase compare
BWI76_RS11840 -4.5 -6.7 tryptophan synthase subunit alpha compare
BWI76_RS15115 -4.4 -4.3 MFS transporter compare
BWI76_RS04680 -4.3 -7.9 2-isopropylmalate synthase compare
BWI76_RS23240 -4.3 -2.9 exonuclease V subunit gamma compare
BWI76_RS22690 -4.3 -5.8 adenylyl-sulfate kinase compare
BWI76_RS04240 -4.1 -3.7 thr operon leader peptide compare
BWI76_RS20435 -4.1 -2.3 chorismate synthase compare
BWI76_RS21465 -3.8 -4.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS26000 -3.7 -7.6 aspartate aminotransferase family protein compare
BWI76_RS01800 -3.6 -5.8 glucose-6-phosphate isomerase compare
BWI76_RS05015 -3.6 -3.0 transcriptional regulator compare
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS02530 -3.2 -3.5 tRNA dimethylallyltransferase compare
BWI76_RS23230 -3.2 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS01200 -3.1 -3.4 diaminopimelate epimerase compare
BWI76_RS05200 -3.1 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS00960 -3.1 -6.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00180 -3.1 -2.0 F0F1 ATP synthase subunit epsilon compare
BWI76_RS06525 -2.8 -8.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS26055 -2.8 -7.4 siroheme synthase compare
BWI76_RS23885 -2.8 -2.6 2-octaprenylphenol hydroxylase compare
BWI76_RS23480 -2.6 -12.7 EAL domain-containing protein compare
BWI76_RS01275 -2.4 -6.4 LysR family transcriptional regulator compare
BWI76_RS17975 -2.2 -5.9 tail-specific protease compare
BWI76_RS15225 -2.1 -2.1 DeoR family transcriptional regulator compare
BWI76_RS00390 -2.1 -4.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS23265 -2.1 -3.4 hypothetical protein compare
BWI76_RS13915 -2.1 -4.3 magnesium transport protein MgtC compare
BWI76_RS10060 -2.1 -2.1 acylphosphatase compare
BWI76_RS01210 -2.0 -2.6 tyrosine recombinase XerC compare
BWI76_RS09655 -2.0 -6.6 leucine-responsive regulatory protein compare
BWI76_RS02180 -2.0 -2.3 hypothetical protein compare
BWI76_RS20650 -1.8 -1.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS20440 -1.8 -1.0 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS25320 -1.8 -6.3 glutamate synthase compare
BWI76_RS20640 -1.8 -5.0 cysteine synthase A compare
BWI76_RS25065 -1.7 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00345 -1.7 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS06800 -1.5 -1.7 DUF2496 domain-containing protein compare
BWI76_RS26620 -1.5 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS22700 -1.5 -4.9 sulfate adenylyltransferase subunit 2 compare
BWI76_RS19840 -1.5 -1.4 hypothetical protein compare
BWI76_RS17110 -1.5 -2.1 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS22695 -1.5 -6.2 sulfate adenylyltransferase compare
BWI76_RS21370 -1.5 -2.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS15840 -1.5 -2.2 prophage protein compare
BWI76_RS25335 -1.4 -3.3 stringent starvation protein A compare
BWI76_RS19025 -1.4 -7.9 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS01540 -1.4 -2.4 thiamine biosynthesis protein ThiS compare
BWI76_RS06765 -1.4 -3.3 transcriptional regulator compare
BWI76_RS24025 -1.3 -6.2 agmatinase compare
BWI76_RS15110 -1.3 -7.3 putative excinuclease ABC subunit A compare
BWI76_RS15830 -1.3 -2.2 hypothetical protein compare
BWI76_RS25315 -1.3 -5.5 glutamate synthase large subunit compare
BWI76_RS01350 -1.3 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS21480 -1.3 -2.7 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS08535 -1.3 -1.9 translocation protein TolB compare
BWI76_RS06395 -1.3 -3.2 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS19870 -1.2 -2.0 malate:quinone oxidoreductase compare
BWI76_RS27820 -1.2 -2.2 ilvB operon leader peptide IvbL compare
BWI76_RS04100 -1.2 -4.1 peptide chain release factor 3 compare
BWI76_RS22705 -1.2 -5.6 siroheme synthase compare
BWI76_RS13595 -1.2 -2.3 transcriptional regulator compare
BWI76_RS01530 -1.2 -3.8 2-iminoacetate synthase ThiH compare
BWI76_RS23915 -1.2 -2.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS00385 -1.2 -6.1 nitrogen assimilation regulatory protein compare
BWI76_RS15825 -1.2 -1.6 hypothetical protein compare
BWI76_RS24075 -1.2 -3.4 glutathione synthase compare
BWI76_RS09870 -1.2 -5.3 aromatic amino acid aminotransferase compare
BWI76_RS04270 -1.2 -3.6 transaldolase compare
BWI76_RS16675 -1.2 -2.0 ABC transporter compare
BWI76_RS02410 -1.2 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS08665 -1.1 -5.2 6-phosphogluconolactonase compare
BWI76_RS01545 -1.1 -2.2 thiamine biosynthesis protein ThiS compare
BWI76_RS20490 -1.1 -2.4 hypothetical protein compare
BWI76_RS20995 -1.1 -3.8 RNA degradosome polyphosphate kinase compare
BWI76_RS06485 -1.1 -2.0 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS16965 -1.1 -1.7 murein lipoprotein compare
BWI76_RS11130 -1.1 -6.4 PTS glucose transporter subunit IIBC compare
BWI76_RS06530 -1.1 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS06185 -1.1 -6.0 shikimate kinase II compare
BWI76_RS04705 -1.1 -5.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS01555 -1.1 -5.2 phosphomethylpyrimidine synthase ThiC compare
BWI76_RS15850 -1.0 -0.6 DUF1317 domain-containing protein compare
BWI76_RS18715 -1.0 -4.0 hypothetical protein compare
BWI76_RS15745 -1.0 -1.6 hypothetical protein compare
BWI76_RS09650 -1.0 -4.0 hypothetical protein compare
BWI76_RS00970 -1.0 -1.8 branched chain amino acid aminotransferase compare
BWI76_RS05450 -1.0 -1.3 ribonuclease HI compare
BWI76_RS00380 -1.0 -5.5 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS25425 -1.0 -1.6 arginine repressor compare
BWI76_RS12090 -1.0 -1.3 HNH endonuclease compare
BWI76_RS25070 -1.0 -1.6 hypothetical protein compare
BWI76_RS21690 -1.0 -1.5 hypothetical protein compare
BWI76_RS25280 -1.0 -2.0 RNase adaptor protein RapZ compare
BWI76_RS21570 -1.0 -2.7 RnfH family protein compare
BWI76_RS01185 -1.0 -1.6 adenylate cyclase compare
BWI76_RS25505 -1.0 -3.3 RNase E specificity factor CsrD compare
BWI76_RS05120 -1.0 -5.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS24850 -1.0 -4.2 DeoR family transcriptional regulator compare
BWI76_RS06770 -1.0 -5.3 Hha toxicity attenuator compare
BWI76_RS01550 -1.0 -3.1 thiamine phosphate synthase compare
BWI76_RS21450 -0.9 -1.4 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS15015 -0.9 -1.3 DUF2132 domain-containing protein compare
BWI76_RS18710 -0.9 -6.3 GGDEF-domain containing protein compare
BWI76_RS23520 -0.9 -1.7 hypothetical protein compare
BWI76_RS08360 -0.9 -1.9 LamB/YcsF family protein compare
BWI76_RS23485 -0.9 -5.5 hypothetical protein compare
BWI76_RS26175 -0.9 -2.2 DeoR/GlpR family transcriptional regulator compare
BWI76_RS26890 -0.9 -1.2 hypothetical protein compare
BWI76_RS19845 -0.9 -2.5 phosphatase compare
BWI76_RS15835 -0.9 -0.8 hypothetical protein compare
BWI76_RS08720 -0.8 -2.1 imidazolonepropionase compare
BWI76_RS19380 -0.8 -1.7 hydroxyethylthiazole kinase compare
BWI76_RS17180 -0.8 -1.5 hypothetical protein compare
BWI76_RS01870 -0.8 -3.9 diacylglycerol kinase compare
BWI76_RS20700 -0.8 -2.9 sulfate/thiosulfate transporter subunit compare
BWI76_RS20385 -0.8 -1.9 aspartate-semialdehyde dehydrogenase compare
BWI76_RS13560 -0.8 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS18550 -0.8 -1.3 tRNA-Asn compare
BWI76_RS04955 -0.8 -1.7 hypoxanthine phosphoribosyltransferase compare
BWI76_RS00355 -0.8 -1.6 DNA polymerase I compare
BWI76_RS20705 -0.8 -4.1 thiosulfate transporter subunit compare
BWI76_RS02985 -0.8 -3.5 reactive intermediate/imine deaminase compare
BWI76_RS09195 -0.8 -1.5 N-acetyltransferase compare
BWI76_RS19245 -0.8 -1.7 dimethylargininase compare
BWI76_RS01925 -0.8 -4.2 aromatic amino acid aminotransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source MS_media across organisms