Experiment set8IT079 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS20375 +1.3 3.0 membrane protein compare
BWI76_RS09860 +1.0 3.9 hypothetical protein compare
BWI76_RS05075 +0.9 1.5 type II secretion system protein GspG compare
BWI76_RS06680 +0.9 1.4 hypothetical protein compare
BWI76_RS14625 +0.9 1.8 protein TolA compare
BWI76_RS08330 +0.9 2.1 hypothetical protein compare
BWI76_RS09640 +0.8 3.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS06540 +0.8 2.0 DNA-binding protein HU-beta compare
BWI76_RS09560 +0.8 2.3 DoxX family membrane protein compare
BWI76_RS14970 +0.8 2.1 pyrroline-5-carboxylate reductase compare
BWI76_RS09520 +0.8 1.6 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS17570 +0.8 1.2 iron-sulfur-binding protein compare
BWI76_RS20145 +0.8 2.0 NADH-quinone oxidoreductase subunit K compare
BWI76_RS14320 +0.8 1.4 hypothetical protein compare
BWI76_RS16075 +0.8 1.6 oxidoreductase compare
BWI76_RS18770 +0.8 1.4 DNA gyrase inhibitor compare
BWI76_RS13380 +0.8 2.3 hypothetical protein compare
BWI76_RS09025 +0.7 1.6 GntR family transcriptional regulator compare
BWI76_RS19460 +0.7 2.8 lipoprotein compare
BWI76_RS21375 +0.7 1.1 autonomous glycyl radical cofactor GrcA compare
BWI76_RS15315 +0.7 2.1 DNA-binding protein compare
BWI76_RS20750 +0.7 1.3 carboxysome structural protein EutK compare
BWI76_RS21340 +0.7 1.5 SoxR reducing system protein RseC compare
BWI76_RS14650 +0.7 1.3 helix-turn-helix transcriptional regulator compare
BWI76_RS16015 +0.7 1.7 pheromone autoinducer 2 transporter compare
BWI76_RS26235 +0.7 2.3 gluconate transporter compare
BWI76_RS13245 +0.7 1.1 DNA-damage-inducible protein I compare
BWI76_RS14835 +0.7 1.3 hypothetical protein compare
BWI76_RS15260 +0.7 1.5 hypothetical protein compare
BWI76_RS26330 +0.6 2.3 ABC transporter ATP-binding protein compare
BWI76_RS11455 +0.6 2.8 AraC family transcriptional regulator compare
BWI76_RS23005 +0.6 2.4 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14665 +0.6 1.6 minor fimbrial subunit YfcQ compare
BWI76_RS14935 +0.6 1.2 NIPSNAP family containing protein compare
BWI76_RS11170 +0.6 1.3 hypothetical protein compare
BWI76_RS23050 +0.6 1.8 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS07730 +0.6 1.3 iron-enterobactin transporter membrane protein compare
BWI76_RS15930 +0.6 1.0 dimethylsulfoxide reductase, chain B compare
BWI76_RS15345 +0.6 2.0 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS01585 +0.6 3.0 transcriptional regulator compare
BWI76_RS07970 +0.6 2.8 hypothetical protein compare
BWI76_RS18335 +0.6 3.3 DNA-binding response regulator compare
BWI76_RS15980 +0.6 1.7 lysine transporter LysE compare
BWI76_RS16795 +0.6 1.7 amino acid ABC transporter ATPase compare
BWI76_RS25485 +0.6 1.4 septum formation protein Maf compare
BWI76_RS07350 +0.6 2.8 alcohol dehydrogenase compare
BWI76_RS08545 +0.6 2.5 cell division protein CpoB compare
BWI76_RS06810 +0.6 2.2 hypothetical protein compare
BWI76_RS11460 +0.6 1.9 DUF441 family protein compare
BWI76_RS20130 +0.6 3.1 NADH-quinone oxidoreductase subunit N compare
BWI76_RS24275 +0.6 1.5 biopolymer transport protein ExbD compare
BWI76_RS12170 +0.6 1.6 hypothetical protein compare
BWI76_RS12545 +0.6 1.5 hypothetical protein compare
BWI76_RS22815 +0.6 4.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS17970 +0.5 1.8 zinc metalloprotease HtpX compare
BWI76_RS23320 +0.5 1.3 hypothetical protein compare
BWI76_RS01065 +0.5 2.6 ATP-dependent RNA helicase RhlB compare
BWI76_RS16645 +0.5 1.4 DeoR family transcriptional regulator compare
BWI76_RS03800 +0.5 1.9 hypothetical protein compare
BWI76_RS10650 +0.5 2.6 PTS fructose-like transporter subunit EIIB compare
BWI76_RS24270 +0.5 1.2 membrane protein compare
BWI76_RS05655 +0.5 1.5 hypothetical protein compare
BWI76_RS01720 +0.5 2.3 L-sorbose 1-phosphate reductase (EC 1.1.1.-) (from data) compare
BWI76_RS02045 +0.5 2.3 LysR family transcriptional regulator compare
BWI76_RS13130 +0.5 1.7 phenylacetic acid degradation protein PaaD compare
BWI76_RS12045 +0.5 1.6 hypothetical protein compare
BWI76_RS24625 +0.5 2.0 hypothetical protein compare
BWI76_RS19240 +0.5 1.2 ABC transporter substrate-binding protein compare
BWI76_RS14400 +0.5 2.7 ISNCY family transposase compare
BWI76_RS18610 +0.5 1.9 transcriptional regulator LysR compare
BWI76_RS09680 +0.5 2.3 dimethyl sulfoxide reductase subunit A compare
BWI76_RS18855 +0.5 2.0 cysteine desulfurase NifS compare
BWI76_RS21810 +0.5 1.0 universal stress protein compare
BWI76_RS04805 +0.5 2.5 8-oxo-dGTP diphosphatase compare
BWI76_RS16090 +0.5 1.2 two-component system response regulator DcuR compare
BWI76_RS01885 +0.5 0.9 CsbD family protein compare
BWI76_RS26185 +0.5 1.8 thiosulfate sulfurtransferase compare
BWI76_RS06885 +0.5 0.7 TonB family protein compare
BWI76_RS10770 +0.5 1.8 pyrimidine utilization protein C compare
BWI76_RS09635 +0.5 0.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS21505 +0.5 0.9 hypothetical protein compare
BWI76_RS17470 +0.5 1.9 MerR family transcriptional regulator compare
BWI76_RS11920 +0.5 1.6 hypothetical protein compare
BWI76_RS17795 +0.5 1.8 ribonuclease D compare
BWI76_RS16070 +0.5 2.7 N-acetylmuramic acid 6-phosphate etherase compare
BWI76_RS03045 +0.5 0.9 hypothetical protein compare
BWI76_RS12450 +0.5 2.1 phage shock protein PspA compare
BWI76_RS08500 +0.5 0.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS25850 +0.5 2.6 prepilin peptidase compare
BWI76_RS06900 +0.5 2.6 phospholipase D compare
BWI76_RS21015 +0.5 1.3 LysR family transcriptional regulator compare
BWI76_RS19860 +0.5 1.0 hypothetical protein compare
BWI76_RS19700 +0.5 1.6 deoxyribonuclease IV compare
BWI76_RS24070 +0.5 1.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS09970 +0.5 0.6 porin OmpA compare
BWI76_RS26020 +0.5 1.6 peptidylprolyl isomerase A compare
BWI76_RS09325 +0.5 1.7 putative bacteriophage tail completion protein compare
BWI76_RS16575 +0.5 1.9 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS14375 +0.5 1.7 hypothetical protein compare
BWI76_RS11515 +0.5 0.6 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS21285 +0.5 1.1 HAD family hydrolase compare
BWI76_RS16195 +0.5 0.7 hypothetical protein compare
BWI76_RS11970 +0.5 2.0 stress response translation initiation inhibitor YciH compare
BWI76_RS03880 +0.5 1.2 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS20165 +0.5 1.9 NADH-quinone oxidoreductase subunit G compare
BWI76_RS00080 +0.5 2.0 N-acetylmannosamine kinase compare
BWI76_RS07600 +0.5 2.0 aspartate aminotransferase family protein compare
BWI76_RS26410 +0.5 1.1 membrane protein compare
BWI76_RS07865 +0.5 1.5 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS17805 +0.5 0.8 membrane protein compare
BWI76_RS10040 +0.4 1.2 heat-shock protein HspQ compare
BWI76_RS09080 +0.4 1.2 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS19325 +0.4 1.1 mandelate racemase compare
BWI76_RS21820 +0.4 2.5 colicin D compare
BWI76_RS15400 +0.4 2.0 anti-RssB factor compare
BWI76_RS12885 +0.4 1.2 hypothetical protein compare
BWI76_RS02635 +0.4 1.2 3-keto-L-gulonate-6-phosphate decarboxylase compare
BWI76_RS22200 +0.4 2.1 iron ABC transporter compare
BWI76_RS22950 +0.4 1.7 membrane protein compare
BWI76_RS15375 +0.4 2.6 peptide transporter compare
BWI76_RS03080 +0.4 2.1 (Fe-S)-cluster assembly protein compare
BWI76_RS18090 +0.4 1.8 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS18605 +0.4 0.8 oxidoreductase molybdopterin-binding protein compare
BWI76_RS06290 +0.4 1.3 ACP phosphodiesterase compare
BWI76_RS00655 +0.4 2.2 inner-membrane translocator compare
BWI76_RS12445 +0.4 2.2 phage shock protein operon transcriptional activator compare
BWI76_RS06250 +0.4 1.8 alpha-glycosidase compare
BWI76_RS11810 +0.4 1.3 outer membrane protein OmpW compare
BWI76_RS17330 +0.4 1.2 nitrate reductase subunit beta compare
BWI76_RS26615 +0.4 2.4 gluconate:H+ symporter (from data) compare
BWI76_RS19190 +0.4 1.7 oligopeptide/dipeptide ABC transporter ATPase compare
BWI76_RS11525 +0.4 1.0 HNH endonuclease compare
BWI76_RS14825 +0.4 1.5 dienelactone hydrolase family protein compare
BWI76_RS22110 +0.4 3.0 putative helix-turn-helix AraC-type transcriptional regulator compare
BWI76_RS13195 +0.4 1.8 glutamate dehydrogenase compare
BWI76_RS13980 +0.4 1.0 hypothetical protein compare
BWI76_RS24525 +0.4 1.6 urease accessory protein UreG compare
BWI76_RS01325 +0.4 0.6 twin-arginine translocase subunit TatB compare
BWI76_RS03875 +0.4 2.4 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BWI76_RS24390 +0.4 1.3 hypothetical protein compare
BWI76_RS11370 +0.4 1.5 iron-dicitrate transporter subunit FecD compare
BWI76_RS11255 +0.4 0.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS15925 +0.4 1.7 dimethyl sulfoxide reductase subunit A compare
BWI76_RS20035 +0.4 2.1 hypothetical protein compare
BWI76_RS16720 +0.4 1.8 hypothetical protein compare
BWI76_RS11770 +0.4 1.7 hypothetical protein compare
BWI76_RS07985 +0.4 0.6 fluoride ion transporter CrcB compare
BWI76_RS13315 +0.4 1.1 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS11685 +0.4 1.8 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) compare
BWI76_RS13265 +0.4 1.6 hypothetical protein compare
BWI76_RS01005 +0.4 1.8 CarD family transcriptional regulator compare
BWI76_RS04605 +0.4 0.9 thiamine ABC transporter ATP-binding protein compare
BWI76_RS16160 +0.4 1.3 LysR family transcriptional regulator compare
BWI76_RS01385 +0.4 1.0 potassium transporter compare
BWI76_RS16660 +0.4 1.3 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS17690 +0.4 2.1 putative glycoporin compare
BWI76_RS09440 +0.4 1.2 hypothetical protein compare
BWI76_RS11490 +0.4 1.2 MltA-interacting protein MipA compare
BWI76_RS11805 +0.4 2.4 hypothetical protein compare
BWI76_RS00060 +0.4 1.4 N-acetylneuraminate lyase compare
BWI76_RS05050 +0.4 2.2 general secretion pathway protein GspL compare
BWI76_RS12550 +0.4 1.1 hypothetical protein compare
BWI76_RS07765 +0.4 0.8 thioesterase compare
BWI76_RS01940 +0.4 1.7 hypothetical protein compare
BWI76_RS17200 +0.4 0.8 hypothetical protein compare
BWI76_RS17645 +0.4 0.9 hypothetical protein compare
BWI76_RS15415 +0.4 1.4 LacI family transcriptional regulator compare
BWI76_RS15650 +0.4 1.4 gp5 compare
BWI76_RS12815 +0.4 1.6 transcriptional regulator FeaR compare
BWI76_RS09360 +0.4 1.5 hypothetical protein compare
BWI76_RS20190 +0.4 2.2 NADH-quinone oxidoreductase subunit A compare
BWI76_RS20090 +0.4 1.7 ribonuclease Z compare
BWI76_RS16210 +0.4 0.9 hypothetical protein compare
BWI76_RS12940 +0.4 1.6 AraC family transcriptional regulator compare
BWI76_RS12070 +0.4 0.6 hypothetical protein compare
BWI76_RS18845 +0.4 0.9 nitrogen fixation protein NifX compare
BWI76_RS00510 +0.4 2.0 glucuronyl hydrolase compare
BWI76_RS17075 +0.4 1.1 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS11020 +0.4 2.1 oxidoreductase family, NAD-binding protein compare
BWI76_RS27670 +0.4 1.1 LysR family transcriptional regulator compare
BWI76_RS16240 +0.4 0.8 anti-adapter protein IraM compare
BWI76_RS22510 +0.4 1.8 hypothetical protein compare
BWI76_RS11725 +0.4 1.9 PTS sugar transporter subunit IIB compare
BWI76_RS01805 +0.4 1.5 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS24330 +0.4 1.5 TIGR00156 family protein compare
BWI76_RS09280 +0.4 1.3 terminase endonuclease subunit compare
BWI76_RS06950 +0.4 2.2 ABC transporter ATP-binding protein compare
BWI76_RS16270 +0.4 2.1 fumarate hydratase, class II compare
BWI76_RS09960 +0.4 1.2 Lon protease compare
BWI76_RS10640 +0.4 1.1 AraC family transcriptional regulator compare
BWI76_RS12770 +0.4 1.3 hypothetical protein compare
BWI76_RS23860 +0.4 1.2 protein disulfide oxidoreductase compare
BWI76_RS02730 +0.4 1.9 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
BWI76_RS25870 +0.4 0.9 elongation factor Tu compare
BWI76_RS20915 +0.4 1.5 peroxiredoxin compare
BWI76_RS06060 +0.4 1.3 DNA-binding response regulator compare
BWI76_RS08510 +0.4 1.3 cyd operon protein YbgE compare
BWI76_RS16760 +0.4 1.0 lipase compare
BWI76_RS22960 +0.4 1.5 YgdI/YgdR family lipoprotein compare
BWI76_RS13400 +0.4 1.3 GntR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source MS_media across organisms