Experiment set8IT077 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 83.25 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS13420 +1.0 1.6 ABC transporter permease compare
BWI76_RS06680 +1.0 1.8 hypothetical protein compare
BWI76_RS24575 +0.9 2.6 hypothetical protein compare
BWI76_RS22815 +0.9 6.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS09305 +0.9 2.9 hypothetical protein compare
BWI76_RS11440 +0.8 2.0 hypothetical protein compare
BWI76_RS23970 +0.8 1.9 mechanosensitive ion channel protein MscS compare
BWI76_RS01995 +0.8 1.9 AraC family transcriptional regulator compare
BWI76_RS05075 +0.8 1.4 type II secretion system protein GspG compare
BWI76_RS03180 +0.8 1.5 phage transcriptional regulator, AlpA compare
BWI76_RS18335 +0.7 4.2 DNA-binding response regulator compare
BWI76_RS06230 +0.7 2.0 DNA-binding response regulator compare
BWI76_RS11520 +0.7 1.7 hypothetical protein compare
BWI76_RS05430 +0.7 3.7 UbiE/COQ5 family methyltransferase compare
BWI76_RS15035 +0.7 0.8 metal ABC transporter permease compare
BWI76_RS07985 +0.7 1.3 fluoride ion transporter CrcB compare
BWI76_RS24770 +0.7 2.3 hypothetical protein compare
BWI76_RS21810 +0.7 1.9 universal stress protein compare
BWI76_RS02090 +0.7 1.5 membrane protein compare
BWI76_RS10900 +0.6 1.8 putative oxidoreductase compare
BWI76_RS01885 +0.6 1.3 CsbD family protein compare
BWI76_RS04970 +0.6 1.3 ABC transporter permease compare
BWI76_RS05965 +0.6 2.4 hypothetical protein compare
BWI76_RS04655 +0.6 2.0 shikimate dehydrogenase compare
BWI76_RS13325 +0.6 2.3 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS20375 +0.6 1.4 membrane protein compare
BWI76_RS13590 +0.6 1.8 hypothetical protein compare
BWI76_RS18360 +0.6 1.4 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS23470 +0.6 5.4 hypothetical protein compare
BWI76_RS09730 +0.6 1.3 pyruvate formate lyase 1-activating protein compare
BWI76_RS01585 +0.6 3.0 transcriptional regulator compare
BWI76_RS05645 +0.6 3.1 fructuronate reductase compare
BWI76_RS21675 +0.6 1.7 hypothetical protein compare
BWI76_RS17570 +0.6 0.6 iron-sulfur-binding protein compare
BWI76_RS16760 +0.6 2.6 lipase compare
BWI76_RS19460 +0.6 1.4 lipoprotein compare
BWI76_RS12465 +0.6 1.2 phage shock protein D compare
BWI76_RS06570 +0.6 2.8 thiamin pyrimidine pyrophosphate hydrolase compare
BWI76_RS19865 +0.6 2.2 ecotin compare
BWI76_RS06325 +0.6 2.2 hypothetical protein compare
BWI76_RS25635 +0.6 2.3 gamma carbonic anhydrase family protein compare
BWI76_RS18225 +0.6 2.4 universal stress protein C compare
BWI76_RS05235 +0.5 1.2 hypothetical protein compare
BWI76_RS07375 +0.5 2.6 dehydrogenase compare
BWI76_RS27825 +0.5 2.8 hypothetical protein compare
BWI76_RS06665 +0.5 2.4 membrane protein compare
BWI76_RS14320 +0.5 1.4 hypothetical protein compare
BWI76_RS11980 +0.5 0.9 DeoR family transcriptional regulator compare
BWI76_RS14415 +0.5 1.7 transcriptional regulator, TetR family protein compare
BWI76_RS00060 +0.5 1.3 N-acetylneuraminate lyase compare
BWI76_RS02880 +0.5 1.7 membrane protein compare
BWI76_RS16315 +0.5 0.9 SirA-like protein compare
BWI76_RS27745 +0.5 2.4 PTS sugar transporter subunit IIB compare
BWI76_RS15980 +0.5 1.7 lysine transporter LysE compare
BWI76_RS14970 +0.5 1.5 pyrroline-5-carboxylate reductase compare
BWI76_RS17765 +0.5 1.9 hypothetical protein compare
BWI76_RS24180 +0.5 1.2 hypothetical protein compare
BWI76_RS00025 +0.5 0.7 hypothetical protein compare
BWI76_RS12125 +0.5 0.8 hypothetical protein compare
BWI76_RS15565 +0.5 1.8 hypothetical protein compare
BWI76_RS08650 +0.5 1.6 molybdate ABC transporter permease compare
BWI76_RS02690 +0.5 1.8 hypothetical protein compare
BWI76_RS10500 +0.5 1.6 flavoprotein monooxygenase compare
BWI76_RS09455 +0.5 1.4 YbjN domain-containing protein compare
BWI76_RS06435 +0.5 1.1 MFS transporter compare
BWI76_RS24110 +0.5 1.1 YggU family protein compare
BWI76_RS11105 +0.5 2.0 aminodeoxychorismate lyase compare
BWI76_RS15190 +0.5 3.0 GGDEF domain-containing protein compare
BWI76_RS23580 +0.5 1.3 hypothetical protein compare
BWI76_RS05800 +0.5 1.6 phage transcriptional activator, Ogr/delta compare
BWI76_RS12390 +0.5 2.0 antibiotic biosynthesis monooxygenase compare
BWI76_RS16515 +0.5 1.5 LysR family transcriptional regulator compare
BWI76_RS06060 +0.5 1.4 DNA-binding response regulator compare
BWI76_RS08395 +0.5 1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS25545 +0.5 1.8 hypothetical protein compare
BWI76_RS27875 +0.5 1.0 membrane protein compare
BWI76_RS10920 +0.5 1.2 putative TetR family transcriptional regulator compare
BWI76_RS15290 +0.5 1.0 transcriptional regulator compare
BWI76_RS11610 +0.5 0.7 glutamate dehydrogenase compare
BWI76_RS01835 +0.5 2.9 chemotaxis protein CheW compare
BWI76_RS15570 +0.5 3.0 phage antirepressor Ant compare
BWI76_RS22435 +0.5 2.0 iron ABC transporter permease AfeC compare
BWI76_RS17380 +0.5 2.5 nitrate transporter component compare
BWI76_RS23505 +0.5 4.1 ferrous iron transporter B compare
BWI76_RS15185 +0.5 1.2 N-acetyltransferase compare
BWI76_RS11365 +0.5 1.0 iron ABC transporter compare
BWI76_RS24725 +0.5 2.4 altronate hydrolase compare
BWI76_RS20145 +0.5 1.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS16220 +0.5 1.6 hypothetical protein compare
BWI76_RS17860 +0.5 1.5 YoaH family protein compare
BWI76_RS02705 +0.5 2.2 iron-sulfur cluster repair di-iron protein compare
BWI76_RS09615 +0.5 1.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS10745 +0.5 0.8 hypothetical protein compare
BWI76_RS11460 +0.4 1.9 DUF441 family protein compare
BWI76_RS21715 +0.4 1.7 transcriptional regulator compare
BWI76_RS26285 +0.4 1.5 glycerophosphodiester phosphodiesterase compare
BWI76_RS24035 +0.4 1.6 hypothetical protein compare
BWI76_RS05045 +0.4 0.8 general secretion pathway protein GspM compare
BWI76_RS09320 +0.4 1.8 P2 phage tail completion protein R compare
BWI76_RS16690 +0.4 2.6 peptide ABC transporter permease compare
BWI76_RS10570 +0.4 2.0 cysteine ABC transporter substrate-binding protein compare
BWI76_RS12985 +0.4 1.2 transcriptional regulator compare
BWI76_RS08600 +0.4 1.3 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS18055 +0.4 1.9 copper resistance protein D compare
BWI76_RS05655 +0.4 1.5 hypothetical protein compare
BWI76_RS18455 +0.4 1.1 tRNA-Ser compare
BWI76_RS04055 +0.4 4.0 GGDEF domain-containing protein compare
BWI76_RS02730 +0.4 2.0 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
BWI76_RS24105 +0.4 1.7 resistance protein compare
BWI76_RS04840 +0.4 2.1 prepilin peptidase-dependent pilin compare
BWI76_RS17770 +0.4 1.1 isomerase/hydrolase compare
BWI76_RS24260 +0.4 0.9 hypothetical protein compare
BWI76_RS14740 +0.4 1.8 LysR family transcriptional regulator compare
BWI76_RS24295 +0.4 1.7 AraC family transcriptional regulator compare
BWI76_RS09275 +0.4 1.9 major capsid protein compare
BWI76_RS08640 +0.4 1.3 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS11350 +0.4 2.3 DeoR family transcriptional regulator compare
BWI76_RS21490 +0.4 3.2 GGDEF domain-containing protein compare
BWI76_RS23050 +0.4 1.5 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS04110 +0.4 2.0 DUF1328 domain-containing protein compare
BWI76_RS11915 +0.4 2.0 protease SohB compare
BWI76_RS09420 +0.4 1.5 hypothetical protein compare
BWI76_RS05945 +0.4 2.0 amino acid ABC transporter permease compare
BWI76_RS24500 +0.4 1.7 urease subunit gamma compare
BWI76_RS19480 +0.4 0.9 transcriptional regulator compare
BWI76_RS05900 +0.4 2.8 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS06695 +0.4 2.5 ABC transporter substrate-binding protein compare
BWI76_RS26235 +0.4 1.3 gluconate transporter compare
BWI76_RS15930 +0.4 1.3 dimethylsulfoxide reductase, chain B compare
BWI76_RS15845 +0.4 0.8 hypothetical protein compare
BWI76_RS10895 +0.4 2.3 phosphatase compare
BWI76_RS24955 +0.4 1.3 hypothetical protein compare
BWI76_RS20560 +0.4 1.4 hypothetical protein compare
BWI76_RS26290 +0.4 2.1 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS10835 +0.4 1.1 hypothetical protein compare
BWI76_RS22840 +0.4 1.3 transposase compare
BWI76_RS16420 +0.4 1.5 anhydro-N-acetylmuramic acid kinase compare
BWI76_RS20125 +0.4 2.4 integrase compare
BWI76_RS21485 +0.4 3.0 DUF4154 domain-containing protein compare
BWI76_RS12785 +0.4 1.6 heat-shock protein HslJ compare
BWI76_RS06320 +0.4 1.7 Xaa-Pro aminopeptidase compare
BWI76_RS18015 +0.4 2.6 serine/threonine-protein phosphatase compare
BWI76_RS03175 +0.4 2.5 hypothetical protein compare
BWI76_RS09070 +0.4 2.5 formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme compare
BWI76_RS14665 +0.4 1.6 minor fimbrial subunit YfcQ compare
BWI76_RS21395 +0.4 1.6 DTW domain-containing protein compare
BWI76_RS21220 +0.4 1.7 membrane protein compare
BWI76_RS11300 +0.4 0.7 cupin compare
BWI76_RS19725 +0.4 2.4 PTS fructose transporter subunit EIIBC compare
BWI76_RS22450 +0.4 1.5 selenoprotein W-related protein compare
BWI76_RS02860 +0.4 1.7 glycine dehydrogenase compare
BWI76_RS20720 +0.4 0.8 hypothetical protein compare
BWI76_RS26920 +0.4 1.7 DNA-3-methyladenine glycosylase I compare
BWI76_RS11790 +0.4 1.5 acyl-CoA thioesterase compare
BWI76_RS23305 +0.4 1.5 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS20760 +0.4 1.7 ethanolamine ammonia-lyase small subunit compare
BWI76_RS14245 +0.4 1.4 carboxymuconolactone decarboxylase family protein compare
BWI76_RS27735 +0.4 2.0 hypothetical protein compare
BWI76_RS12145 +0.4 1.3 hypothetical protein compare
BWI76_RS23755 +0.4 2.0 transcriptional regulator compare
BWI76_RS03015 +0.4 0.9 RNase E inhibitor protein compare
BWI76_RS07765 +0.4 1.6 thioesterase compare
BWI76_RS26910 +0.4 1.9 hypothetical protein compare
BWI76_RS08680 +0.4 2.6 hypothetical protein compare
BWI76_RS06635 +0.4 0.5 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS20565 +0.4 1.2 hypothetical protein compare
BWI76_RS04115 +0.4 1.4 patatin family protein compare
BWI76_RS07285 +0.4 2.0 LysR family transcriptional regulator compare
BWI76_RS18830 +0.4 1.2 protein NifY compare
BWI76_RS07795 +0.4 1.9 oxidoreductase compare
BWI76_RS20695 +0.4 0.8 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS16785 +0.4 1.1 peptidase M20 compare
BWI76_RS20785 +0.4 0.7 ethanolamine utilization protein EutJ compare
BWI76_RS12485 +0.4 1.9 TyrR family transcriptional regulator compare
BWI76_RS16240 +0.4 1.5 anti-adapter protein IraM compare
BWI76_RS21560 +0.4 0.9 DNA repair protein RecN compare
BWI76_RS27890 +0.4 2.4 GntR family transcriptional regulator compare
BWI76_RS04860 +0.4 2.1 alpha-N-arabinofuranosidase compare
BWI76_RS19165 +0.4 2.2 chemotaxis protein CheY compare
BWI76_RS18125 +0.4 0.9 murein DD-endopeptidase MepM compare
BWI76_RS05510 +0.4 1.9 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS12070 +0.4 0.7 hypothetical protein compare
BWI76_RS02920 +0.4 1.4 addiction module toxin RelE compare
BWI76_RS22940 +0.4 1.5 DNA-binding transcriptional activator FucR compare
BWI76_RS02560 +0.4 1.8 membrane protein compare
BWI76_RS20225 +0.4 2.4 hypothetical protein compare
BWI76_RS09100 +0.4 1.9 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS26505 +0.4 2.1 nickel ABC transporter permease subunit NikB compare
BWI76_RS14960 +0.4 1.6 MFS transporter compare
BWI76_RS16590 +0.4 1.7 short-chain dehydrogenase compare
BWI76_RS19530 +0.4 1.6 YIP1 family protein compare
BWI76_RS07995 +0.4 1.2 twin-arginine translocase subunit TatA compare
BWI76_RS15825 +0.4 0.5 hypothetical protein compare
BWI76_RS22855 +0.4 0.8 hypothetical protein compare
BWI76_RS14265 +0.4 1.5 LysR family transcriptional regulator compare
BWI76_RS14710 +0.4 2.0 FAD-dependent oxidoreductase compare
BWI76_RS26525 +0.4 1.7 nickel-responsive transcriptional regulator NikR compare
BWI76_RS16455 +0.4 1.1 superoxide dismutase compare
BWI76_RS20915 +0.4 2.1 peroxiredoxin compare
BWI76_RS05680 +0.4 1.8 LacI family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms