Experiment set8IT076 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -9.6 -6.6 colicin V production protein compare
BWI76_RS24285 -8.2 -8.0 cystathionine beta-lyase compare
BWI76_RS18950 -7.5 -4.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS08385 -7.3 -4.4 citrate (Si)-synthase compare
BWI76_RS04465 -7.1 -6.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18925 -7.0 -8.4 histidinol dehydrogenase compare
BWI76_RS09645 -6.9 -3.0 thioredoxin-disulfide reductase compare
BWI76_RS18930 -6.7 -5.8 histidinol-phosphate transaminase compare
BWI76_RS04675 -6.6 -6.7 3-isopropylmalate dehydrogenase compare
BWI76_RS26085 -6.5 -4.5 3-dehydroquinate synthase compare
BWI76_RS02995 -6.4 -9.5 aspartate carbamoyltransferase compare
BWI76_RS23220 -6.2 -8.9 amino-acid N-acetyltransferase compare
BWI76_RS04250 -6.2 -7.4 homoserine kinase compare
BWI76_RS00980 -6.1 -13.0 PLP-dependent threonine dehydratase compare
BWI76_RS07065 -6.1 -9.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01655 -6.0 -7.2 homoserine O-succinyltransferase compare
BWI76_RS25115 -6.0 -8.9 argininosuccinate synthase compare
BWI76_RS18940 -5.9 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS09755 -5.9 -9.9 phosphoserine transaminase compare
BWI76_RS20350 -5.8 -5.3 amidophosphoribosyltransferase compare
BWI76_RS05835 -5.8 -5.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS04255 -5.8 -11.7 threonine synthase compare
BWI76_RS00850 -5.7 -9.3 acetylglutamate kinase compare
BWI76_RS13920 -5.6 -7.8 magnesium-translocating P-type ATPase compare
BWI76_RS00990 -5.6 -11.4 ketol-acid reductoisomerase compare
BWI76_RS21265 -5.6 -11.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS19845 -5.6 -8.3 phosphatase compare
BWI76_RS04685 -5.5 -13.0 putative leucine operon leader peptide compare
BWI76_RS19840 -5.5 -2.4 hypothetical protein compare
BWI76_RS18935 -5.5 -6.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04470 -5.5 -9.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS04160 -5.5 -6.0 phosphoserine phosphatase compare
BWI76_RS00965 -5.5 -2.4 acetolactate synthase 2 small subunit compare
BWI76_RS01615 -5.5 -12.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23360 -5.5 -6.5 diaminopimelate decarboxylase compare
BWI76_RS20475 -5.4 -6.4 phospholipid-binding lipoprotein MlaA compare
BWI76_RS06525 -5.4 -7.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS05840 -5.4 -7.4 glutamate 5-kinase compare
BWI76_RS20895 -5.4 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01325 -5.3 -4.9 twin-arginine translocase subunit TatB compare
BWI76_RS23365 -5.3 -4.7 LysR family transcriptional regulator compare
BWI76_RS07070 -5.3 -7.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00855 -5.3 -8.6 argininosuccinate lyase compare
BWI76_RS26570 -5.2 -5.1 anion permease compare
BWI76_RS04680 -5.2 -14.2 2-isopropylmalate synthase compare
BWI76_RS20965 -5.1 -6.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00785 -5.1 -8.5 cystathionine gamma-synthase compare
BWI76_RS04665 -5.0 -17.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS23920 -5.0 -6.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04670 -4.9 -8.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS03010 -4.9 -7.9 ornithine carbamoyltransferase compare
BWI76_RS18920 -4.9 -4.4 ATP phosphoribosyltransferase compare
BWI76_RS01610 -4.8 -7.1 phosphoribosylamine--glycine ligase compare
BWI76_RS24400 -4.8 -10.2 outer membrane channel protein TolC compare
BWI76_RS04245 -4.8 -13.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00845 -4.8 -11.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS15115 -4.7 -4.6 MFS transporter compare
BWI76_RS11860 -4.7 -8.6 anthranilate synthase component I compare
BWI76_RS21475 -4.7 -6.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00805 -4.7 -5.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS25645 -4.7 -9.4 shikimate dehydrogenase compare
BWI76_RS00400 -4.6 -3.2 glutamine synthetase compare
BWI76_RS27385 -4.6 -9.3 orotate phosphoribosyltransferase compare
BWI76_RS10990 -4.6 -5.5 dihydroorotase compare
BWI76_RS25230 -4.6 -9.2 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS18955 -4.5 -5.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00975 -4.5 -7.8 dihydroxy-acid dehydratase compare
BWI76_RS11855 -4.4 -6.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11845 -4.4 -4.4 tryptophan synthase subunit beta compare
BWI76_RS25225 -4.3 -5.9 ABC transporter permease compare
BWI76_RS00835 -4.3 -11.8 phosphoenolpyruvate carboxylase compare
BWI76_RS11850 -4.3 -11.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23240 -4.3 -3.0 exonuclease V subunit gamma compare
BWI76_RS00180 -4.3 -2.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17975 -4.2 -6.4 tail-specific protease compare
BWI76_RS11965 -4.2 -4.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23265 -4.2 -4.4 hypothetical protein compare
BWI76_RS00960 -4.0 -10.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS20650 -4.0 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS09760 -3.8 -6.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09910 -3.8 -15.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04645 -3.7 -5.7 3-dehydroquinase compare
BWI76_RS21070 -3.7 -3.1 outer membrane protein assembly factor BamB compare
BWI76_RS02530 -3.7 -3.8 tRNA dimethylallyltransferase compare
BWI76_RS01800 -3.7 -6.1 glucose-6-phosphate isomerase compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS25215 -3.6 -4.3 phospholipid-binding protein MlaC compare
BWI76_RS09660 -3.6 -2.5 DNA translocase FtsK compare
BWI76_RS01210 -3.5 -3.9 tyrosine recombinase XerC compare
BWI76_RS11840 -3.5 -7.0 tryptophan synthase subunit alpha compare
BWI76_RS26940 -3.5 -6.4 transcriptional regulator compare
BWI76_RS01275 -3.4 -7.6 LysR family transcriptional regulator compare
BWI76_RS04525 -3.4 -2.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS21465 -3.3 -4.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04240 -3.2 -4.8 thr operon leader peptide compare
BWI76_RS05015 -3.2 -2.9 transcriptional regulator compare
BWI76_RS26000 -3.2 -10.3 aspartate aminotransferase family protein compare
BWI76_RS01330 -3.1 -6.2 twin-arginine translocase subunit TatC compare
BWI76_RS16965 -3.1 -4.1 murein lipoprotein compare
BWI76_RS23480 -3.1 -13.1 EAL domain-containing protein compare
BWI76_RS15225 -3.1 -2.7 DeoR family transcriptional regulator compare
BWI76_RS17980 -3.1 -3.3 RNA chaperone ProQ compare
BWI76_RS02410 -3.1 -3.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS04510 -3.0 -2.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00985 -3.0 -5.9 transcriptional regulator IlvY compare
BWI76_RS25065 -2.9 -3.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS08495 -2.9 -7.9 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS20145 -2.9 -2.8 NADH-quinone oxidoreductase subunit K compare
BWI76_RS04530 -2.8 -2.7 peptidylprolyl isomerase SurA compare
BWI76_RS26665 -2.8 -4.2 DNA-binding response regulator compare
BWI76_RS08500 -2.8 -6.0 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS00345 -2.8 -5.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS26670 -2.8 -8.4 two-component sensor histidine kinase compare
BWI76_RS01350 -2.7 -2.1 NAD(P)H-flavin reductase compare
BWI76_RS27290 -2.7 -11.4 hypothetical protein compare
BWI76_RS06530 -2.6 -5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS18135 -2.6 -7.4 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS25220 -2.6 -2.1 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS09640 -2.5 -2.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS01200 -2.4 -2.9 diaminopimelate epimerase compare
BWI76_RS21370 -2.4 -3.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS24850 -2.4 -10.8 DeoR family transcriptional regulator compare
BWI76_RS04705 -2.4 -7.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS23885 -2.4 -2.1 2-octaprenylphenol hydroxylase compare
BWI76_RS25335 -2.3 -5.5 stringent starvation protein A compare
BWI76_RS27305 -2.3 -7.8 glycosyl transferase compare
BWI76_RS18140 -2.3 -2.7 zinc ABC transporter permease compare
BWI76_RS13915 -2.2 -5.0 magnesium transport protein MgtC compare
BWI76_RS27390 -2.2 -5.3 ribonuclease PH compare
BWI76_RS06765 -2.2 -5.5 transcriptional regulator compare
BWI76_RS22690 -2.1 -5.6 adenylyl-sulfate kinase compare
BWI76_RS20435 -2.1 -1.5 chorismate synthase compare
BWI76_RS09635 -2.1 -2.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS26395 -2.1 -6.2 cell division protein FtsE compare
BWI76_RS06395 -2.1 -4.3 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS27310 -2.1 -11.2 glycosyltransferase compare
BWI76_RS04305 -2.0 -1.7 molecular chaperone DnaJ compare
BWI76_RS05260 -2.0 -2.5 chaperone compare
BWI76_RS01115 -2.0 -4.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS25600 -1.9 -1.7 tRNA-Thr compare
BWI76_RS27430 -1.9 -1.8 (p)ppGpp synthetase compare
BWI76_RS09970 -1.9 -1.6 porin OmpA compare
BWI76_RS03665 -1.9 -2.9 ABC transporter ATP-binding protein compare
BWI76_RS19375 -1.9 -3.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS26075 -1.9 -2.4 DNA adenine methylase compare
BWI76_RS15110 -1.9 -11.0 putative excinuclease ABC subunit A compare
BWI76_RS25315 -1.9 -10.8 glutamate synthase large subunit compare
BWI76_RS01280 -1.8 -10.3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS26390 -1.8 -3.9 cell division protein FtsX compare
BWI76_RS18130 -1.8 -5.2 zinc ABC transporter substrate-binding protein compare
BWI76_RS26455 -1.8 -4.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21350 -1.8 -4.3 anti-RNA polymerase sigma factor SigE compare
BWI76_RS16715 -1.7 -10.0 hypothetical protein compare
BWI76_RS22755 -1.7 -6.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01125 -1.7 -4.3 4-alpha-L-fucosyltransferase compare
BWI76_RS15850 -1.7 -1.1 DUF1317 domain-containing protein compare
BWI76_RS00875 -1.7 -5.2 DNA-binding transcriptional regulator FabR compare
BWI76_RS27165 -1.7 -3.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS16535 -1.7 -7.8 MATE family efflux transporter conserved
BWI76_RS22240 -1.7 -5.2 transcriptional regulator compare
BWI76_RS02815 -1.7 -3.4 fructose-bisphosphatase class I compare
BWI76_RS26460 -1.7 -4.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS04715 -1.6 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS05120 -1.6 -8.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06770 -1.6 -8.8 Hha toxicity attenuator compare
BWI76_RS25070 -1.6 -2.3 hypothetical protein compare
BWI76_RS01545 -1.6 -3.3 thiamine biosynthesis protein ThiS compare
BWI76_RS08525 -1.6 -2.6 colicin transporter compare
BWI76_RS22650 -1.6 -5.7 lipoprotein NlpD compare
BWI76_RS19905 -1.6 -6.2 OmpK36 porin compare
BWI76_RS20150 -1.6 -2.9 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20440 -1.5 -1.6 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS02725 -1.5 -1.6 HxlR family transcriptional regulator compare
BWI76_RS01110 -1.5 -4.9 TDP-fucosamine acetyltransferase compare
BWI76_RS01095 -1.5 -2.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS24075 -1.5 -4.3 glutathione synthase compare
BWI76_RS21140 -1.5 -2.4 molecular chaperone HscA compare
BWI76_RS12090 -1.5 -1.7 HNH endonuclease compare
BWI76_RS04515 -1.5 -2.0 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS23915 -1.5 -3.1 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS25320 -1.5 -5.9 glutamate synthase compare
BWI76_RS01530 -1.4 -5.1 2-iminoacetate synthase ThiH compare
BWI76_RS01185 -1.4 -2.3 adenylate cyclase compare
BWI76_RS01135 -1.4 -6.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS21165 -1.4 -2.3 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS08760 -1.4 -7.1 biotin synthase compare
BWI76_RS01540 -1.4 -2.9 thiamine biosynthesis protein ThiS compare
BWI76_RS20140 -1.4 -5.7 NADH-quinone oxidoreductase subunit L compare
BWI76_RS01080 -1.4 -6.1 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS00390 -1.4 -4.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS01550 -1.4 -4.5 thiamine phosphate synthase compare
BWI76_RS01555 -1.4 -7.0 phosphomethylpyrimidine synthase ThiC compare
BWI76_RS25285 -1.3 -1.7 HPr family phosphocarrier protein compare
BWI76_RS13595 -1.3 -3.0 transcriptional regulator compare
BWI76_RS02735 -1.3 -4.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS11275 -1.3 -5.4 sensor protein PhoQ compare
BWI76_RS01535 -1.3 -6.3 thiazole synthase compare
BWI76_RS24315 -1.3 -6.1 cell division protein FtsP compare
BWI76_RS00970 -1.3 -1.8 branched chain amino acid aminotransferase compare
BWI76_RS20130 -1.3 -3.8 NADH-quinone oxidoreductase subunit N compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms