Experiment set8IT072 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18935 -8.5 -8.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09760 -8.3 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04670 -7.9 -9.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18930 -7.9 -3.6 histidinol-phosphate transaminase compare
BWI76_RS04465 -7.8 -5.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS24285 -7.7 -9.2 cystathionine beta-lyase compare
BWI76_RS07070 -7.6 -5.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS13920 -7.6 -9.0 magnesium-translocating P-type ATPase compare
BWI76_RS00785 -7.4 -5.1 cystathionine gamma-synthase compare
BWI76_RS04250 -7.3 -8.7 homoserine kinase compare
BWI76_RS18950 -7.3 -4.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS08385 -7.2 -3.7 citrate (Si)-synthase compare
BWI76_RS00990 -6.9 -7.4 ketol-acid reductoisomerase compare
BWI76_RS18940 -6.8 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS09645 -6.8 -2.3 thioredoxin-disulfide reductase compare
BWI76_RS25320 -6.8 -10.0 glutamate synthase compare
BWI76_RS04470 -6.7 -11.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS04255 -6.7 -10.2 threonine synthase compare
BWI76_RS05015 -6.7 -4.5 transcriptional regulator compare
BWI76_RS00390 -6.6 -7.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS00385 -6.4 -9.4 nitrogen assimilation regulatory protein compare
BWI76_RS20895 -6.4 -5.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18955 -6.4 -6.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18925 -6.4 -7.0 histidinol dehydrogenase compare
BWI76_RS01615 -6.3 -11.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS26085 -6.2 -3.6 3-dehydroquinate synthase compare
BWI76_RS07065 -6.0 -9.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04160 -6.0 -6.0 phosphoserine phosphatase compare
BWI76_RS25115 -5.9 -8.0 argininosuccinate synthase compare
BWI76_RS05835 -5.7 -4.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS02735 -5.6 -5.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS11855 -5.6 -6.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS22755 -5.6 -8.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23220 -5.5 -8.8 amino-acid N-acetyltransferase compare
BWI76_RS00850 -5.5 -6.8 acetylglutamate kinase compare
BWI76_RS11850 -5.4 -8.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS19840 -5.4 -1.9 hypothetical protein compare
BWI76_RS20350 -5.3 -5.9 amidophosphoribosyltransferase compare
BWI76_RS00965 -5.2 -1.8 acetolactate synthase 2 small subunit compare
BWI76_RS04665 -5.2 -15.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS03010 -5.1 -7.9 ornithine carbamoyltransferase compare
BWI76_RS22690 -5.1 -3.3 adenylyl-sulfate kinase compare
BWI76_RS04680 -5.0 -12.3 2-isopropylmalate synthase compare
BWI76_RS04675 -5.0 -4.1 3-isopropylmalate dehydrogenase compare
BWI76_RS05840 -5.0 -4.5 glutamate 5-kinase compare
BWI76_RS25315 -5.0 -8.6 glutamate synthase large subunit compare
BWI76_RS04685 -5.0 -8.7 putative leucine operon leader peptide compare
BWI76_RS01655 -4.8 -6.7 homoserine O-succinyltransferase compare
BWI76_RS21475 -4.8 -5.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09755 -4.7 -5.9 phosphoserine transaminase compare
BWI76_RS04645 -4.7 -5.6 3-dehydroquinase compare
BWI76_RS23920 -4.7 -6.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS23265 -4.7 -3.7 hypothetical protein compare
BWI76_RS04245 -4.6 -13.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11845 -4.6 -3.3 tryptophan synthase subunit beta compare
BWI76_RS26570 -4.6 -5.4 anion permease compare
BWI76_RS00805 -4.6 -4.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00835 -4.5 -10.7 phosphoenolpyruvate carboxylase compare
BWI76_RS21265 -4.5 -11.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00980 -4.5 -9.9 PLP-dependent threonine dehydratase compare
BWI76_RS25645 -4.5 -8.7 shikimate dehydrogenase compare
BWI76_RS11860 -4.4 -6.3 anthranilate synthase component I compare
BWI76_RS00400 -4.4 -2.5 glutamine synthetase compare
BWI76_RS02530 -4.3 -4.2 tRNA dimethylallyltransferase compare
BWI76_RS23365 -4.3 -4.5 LysR family transcriptional regulator compare
BWI76_RS01210 -4.3 -2.9 tyrosine recombinase XerC compare
BWI76_RS00845 -4.3 -6.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20965 -4.3 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20355 -4.2 -3.7 colicin V production protein compare
BWI76_RS00855 -4.2 -7.1 argininosuccinate lyase compare
BWI76_RS00975 -4.2 -5.8 dihydroxy-acid dehydratase compare
BWI76_RS27385 -4.2 -6.6 orotate phosphoribosyltransferase compare
BWI76_RS04240 -4.2 -2.6 thr operon leader peptide compare
BWI76_RS11965 -4.1 -2.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20435 -4.1 -2.0 chorismate synthase compare
BWI76_RS26055 -4.1 -7.0 siroheme synthase compare
BWI76_RS00180 -4.1 -1.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23240 -4.0 -2.8 exonuclease V subunit gamma compare
BWI76_RS21465 -4.0 -2.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS17975 -3.9 -4.5 tail-specific protease compare
BWI76_RS22765 -3.9 -7.7 sulfite reductase subunit alpha compare
BWI76_RS11840 -3.7 -6.3 tryptophan synthase subunit alpha compare
BWI76_RS01610 -3.6 -6.8 phosphoribosylamine--glycine ligase compare
BWI76_RS06525 -3.6 -5.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS23230 -3.4 -2.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS02995 -3.3 -7.9 aspartate carbamoyltransferase compare
BWI76_RS05120 -3.3 -7.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS22760 -3.3 -4.8 sulfite reductase subunit beta compare
BWI76_RS15115 -3.3 -5.1 MFS transporter compare
BWI76_RS09910 -3.2 -14.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18920 -3.2 -2.4 ATP phosphoribosyltransferase compare
BWI76_RS06765 -3.1 -3.0 transcriptional regulator compare
BWI76_RS01275 -3.1 -5.1 LysR family transcriptional regulator compare
BWI76_RS04305 -3.1 -1.5 molecular chaperone DnaJ compare
BWI76_RS02410 -3.0 -2.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS23360 -3.0 -2.1 diaminopimelate decarboxylase compare
BWI76_RS00960 -2.8 -5.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS10990 -2.8 -2.2 dihydroorotase compare
BWI76_RS15225 -2.7 -2.5 DeoR family transcriptional regulator compare
BWI76_RS05200 -2.6 -3.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS17720 -2.6 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23480 -2.6 -12.2 EAL domain-containing protein compare
BWI76_RS19845 -2.6 -4.4 phosphatase compare
BWI76_RS15825 -2.5 -2.1 hypothetical protein compare
BWI76_RS00985 -2.5 -6.5 transcriptional regulator IlvY compare
BWI76_RS09655 -2.5 -6.3 leucine-responsive regulatory protein compare
BWI76_RS04705 -2.4 -5.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS11155 -2.4 -3.4 penicillin-binding protein activator LpoB compare
BWI76_RS13915 -2.4 -4.4 magnesium transport protein MgtC compare
BWI76_RS04510 -2.4 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS08520 -2.3 -3.5 colicin transporter TolQ compare
BWI76_RS27430 -2.3 -1.5 (p)ppGpp synthetase compare
BWI76_RS27390 -2.3 -2.6 ribonuclease PH compare
BWI76_RS17375 -2.2 -2.7 nitrate ABC transporter, permease protein compare
BWI76_RS17385 -2.2 -5.0 nitrate regulatory protein compare
BWI76_RS01330 -2.2 -4.1 twin-arginine translocase subunit TatC compare
BWI76_RS09660 -2.1 -1.8 DNA translocase FtsK compare
BWI76_RS17365 -2.0 -10.6 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS25065 -2.0 -2.5 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01800 -2.0 -3.2 glucose-6-phosphate isomerase compare
BWI76_RS15290 -2.0 -1.6 transcriptional regulator compare
BWI76_RS04515 -2.0 -1.6 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS23070 -1.9 -6.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS16965 -1.9 -2.6 murein lipoprotein compare
BWI76_RS17380 -1.9 -6.4 nitrate transporter component compare
BWI76_RS00600 -1.9 -4.6 LacI family transcriptional regulator compare
BWI76_RS20650 -1.8 -2.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS23915 -1.8 -1.9 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS01280 -1.8 -7.6 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS27165 -1.7 -4.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS26665 -1.7 -1.7 DNA-binding response regulator compare
BWI76_RS02580 -1.7 -1.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS06770 -1.7 -7.6 Hha toxicity attenuator compare
BWI76_RS25335 -1.7 -2.4 stringent starvation protein A compare
BWI76_RS06530 -1.6 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08925 -1.6 -4.3 DNA-binding protein YbiB compare
BWI76_RS25600 -1.6 -1.1 tRNA-Thr compare
BWI76_RS24025 -1.6 -4.3 agmatinase compare
BWI76_RS23055 -1.6 -2.1 cobalamin biosynthesis protein CbiG compare
BWI76_RS00380 -1.6 -5.1 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS15215 -1.5 -1.4 N-acetyltransferase compare
BWI76_RS08180 -1.5 -5.9 asparagine synthase B compare
BWI76_RS24400 -1.5 -4.6 outer membrane channel protein TolC compare
BWI76_RS01115 -1.5 -2.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26775 -1.5 -2.5 endo-1,4-D-glucanase compare
BWI76_RS16535 -1.5 -5.0 MATE family efflux transporter compare
BWI76_RS01185 -1.5 -2.4 adenylate cyclase compare
BWI76_RS23125 -1.4 -1.9 propanediol dehydratase small subunit compare
BWI76_RS08535 -1.4 -1.9 translocation protein TolB compare
BWI76_RS20440 -1.4 -1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS05260 -1.4 -1.5 chaperone compare
BWI76_RS01870 -1.4 -3.0 diacylglycerol kinase compare
BWI76_RS08760 -1.3 -3.4 biotin synthase compare
BWI76_RS26200 -1.3 -2.9 starch synthase compare
BWI76_RS15110 -1.3 -6.7 putative excinuclease ABC subunit A compare
BWI76_RS16675 -1.3 -1.8 ABC transporter compare
BWI76_RS19375 -1.3 -1.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS26000 -1.3 -4.7 aspartate aminotransferase family protein compare
BWI76_RS01550 -1.3 -2.7 thiamine phosphate synthase compare
BWI76_RS15835 -1.3 -1.2 hypothetical protein compare
BWI76_RS17980 -1.3 -1.4 RNA chaperone ProQ compare
BWI76_RS04270 -1.2 -3.6 transaldolase compare
BWI76_RS08525 -1.2 -2.0 colicin transporter compare
BWI76_RS06800 -1.2 -1.2 DUF2496 domain-containing protein compare
BWI76_RS09650 -1.2 -3.0 hypothetical protein compare
BWI76_RS02725 -1.2 -1.0 HxlR family transcriptional regulator compare
BWI76_RS19025 -1.2 -5.9 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS00345 -1.1 -1.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS25505 -1.1 -4.5 RNase E specificity factor CsrD compare
BWI76_RS18715 -1.1 -3.7 hypothetical protein compare
BWI76_RS24850 -1.1 -4.5 DeoR family transcriptional regulator compare
BWI76_RS24485 -1.1 -1.5 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS11700 -1.1 -1.3 hypothetical protein compare
BWI76_RS08980 -1.1 -1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS08645 -1.1 -1.6 molybdate ABC transporter substrate-binding protein compare
BWI76_RS27305 -1.1 -4.0 glycosyl transferase compare
BWI76_RS01200 -1.1 -1.4 diaminopimelate epimerase compare
BWI76_RS08665 -1.1 -3.6 6-phosphogluconolactonase compare
BWI76_RS10245 -1.1 -1.6 aspartate aminotransferase compare
BWI76_RS13595 -1.1 -2.4 transcriptional regulator compare
BWI76_RS26395 -1.1 -2.9 cell division protein FtsE compare
BWI76_RS15060 -1.1 -2.0 MarR family transcriptional regulator compare
BWI76_RS26620 -1.0 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS15840 -1.0 -1.4 prophage protein compare
BWI76_RS19685 -1.0 -2.9 lysine transporter compare
BWI76_RS26455 -1.0 -2.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS20360 -1.0 -1.0 cell division protein DedD compare
BWI76_RS15680 -1.0 -1.5 hypothetical protein compare
BWI76_RS24075 -1.0 -2.9 glutathione synthase compare
BWI76_RS27225 -1.0 -2.2 rhodanese-like domain-containing protein compare
BWI76_RS20930 -1.0 -1.2 arsenate reductase (glutaredoxin) compare
BWI76_RS00095 -1.0 -1.5 DNA-binding transcriptional regulator compare
BWI76_RS20390 -1.0 -1.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS25245 -1.0 -2.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS09970 -1.0 -1.7 porin OmpA compare
BWI76_RS26075 -1.0 -2.3 DNA adenine methylase compare
BWI76_RS20155 -1.0 -0.7 NADH-quinone oxidoreductase subunit I compare
BWI76_RS08775 -1.0 -3.8 dethiobiotin synthase compare
BWI76_RS22805 -1.0 -3.6 GTP diphosphokinase compare
BWI76_RS03595 -1.0 -0.8 ethanolamine utilization protein EutM compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms