Experiment set8IT072 for Caulobacter crescentus NA1000

Compare to:

PYE with CHIR-090 4 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03961 +1.2 2.4 hypothetical protein compare
CCNA_01176 +0.9 2.3 hypothetical protein compare
CCNA_02000 +0.9 1.7 SSU ribosomal protein S2P compare
CCNA_01624 +0.8 3.7 orotate phosphoribosyltransferase compare
CCNA_02030 +0.8 2.2 hypothetical protein compare
CCNA_00389 +0.8 1.8 aminomethyltransferase family protein compare
CCNA_02646 +0.8 1.4 cell division protein MraZ compare
CCNA_01094 +0.8 4.6 hypothetical protein compare
CCNA_02021 +0.7 3.2 hypothetical protein compare
CCNA_03944 +0.7 1.6 hypothetical protein compare
CCNA_03918 +0.7 1.3 hypothetical protein compare
CCNA_00153 +0.7 2.8 adenine nucleotide exchange factor GrpE compare
CCNA_03070 +0.7 2.4 4-oxalocrotonate tautomerase compare
CCNA_03951 +0.7 2.3 hypothetical protein compare
CCNA_02942 +0.7 2.8 nucleoside-diphosphate-sugar epimerase compare
CCNA_02124 +0.7 3.3 hypothetical protein compare
CCNA_01840 +0.7 4.6 MerR-family transcriptional regulator compare
CCNA_03936 +0.6 1.9 hypothetical protein compare
CCNA_02025 +0.6 3.1 hypothetical protein compare
CCNA_02671 +0.6 2.6 hypothetical protein compare
CCNA_02732 +0.6 2.7 hypothetical protein compare
CCNA_02026 +0.6 2.6 hypothetical protein compare
CCNA_02242 +0.6 2.7 PHB granule-associated protein, phasin2 compare
CCNA_03252 +0.6 3.7 CopY/TcrY-family transcriptional regulator compare
CCNA_00518 +0.6 3.0 LSU ribosomal protein L25P compare
CCNA_01979 +0.6 3.3 LexA repressor compare
CCNA_02066 +0.6 3.6 phytoene/squalene synthase family protein compare
CCNA_03598 +0.6 1.1 two-component sensor histidine kinase DivL compare
CCNA_01186 +0.6 3.9 hypothetical protein compare
CCNA_03964 +0.6 2.2 hypothetical protein compare
CCNA_01942 +0.6 3.0 Rrf2 family protein compare
CCNA_01913 +0.6 4.1 MarR-family transcriptional regulator compare
CCNA_00147 +0.6 1.0 hypothetical protein compare
CCNA_02103 +0.6 3.6 hypothetical protein compare
CCNA_00919 +0.6 3.6 hypothetical protein compare
CCNA_01731 +0.6 2.8 colicin V production protein CvpA compare
CCNA_R0047 +0.6 2.3 tRNA-Val compare
CCNA_01573 +0.6 3.4 ArsR-family transcriptional regulator compare
CCNA_01851 +0.6 4.7 quinol cytochrome oxidase polypeptide II compare
CCNA_00109 +0.6 3.9 thioredoxin compare
CCNA_01553 +0.6 3.8 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_00027 +0.6 1.2 2OG-Fe(II) oxygenase compare
CCNA_00972 +0.5 2.5 hypothetical protein compare
CCNA_01175 +0.5 2.8 uroporphyrin-III C-methyltransferase compare
CCNA_02004 +0.5 1.4 SOS-induced inhibitor of cell division SidA compare
CCNA_01712 +0.5 3.7 CopY/TcrY family transcriptional repressor compare
CCNA_01629 +0.5 2.9 signal peptidase I compare
CCNA_01420 +0.5 2.1 NrdR family transcriptional regulator compare
CCNA_00872 +0.5 1.7 glutaredoxin compare
CCNA_02597 +0.5 2.8 hypothetical protein compare
CCNA_03274 +0.5 0.9 hypothetical protein compare
CCNA_01849 +0.5 3.1 quinol cytochrome oxidase polypeptide III compare
CCNA_03762 +0.5 2.3 acetolactate synthase-related protein compare
CCNA_01850 +0.5 3.9 quinol cytochrome oxidase polypeptide I compare
CCNA_01790 +0.5 2.0 protein translocase subunit secG compare
CCNA_00322 +0.5 3.5 hypothetical protein compare
CCNA_01433 +0.5 1.6 integration host factor alpha-subunit compare
CCNA_02040 +0.5 1.1 phosphoserine phosphatase compare
CCNA_01910 +0.5 0.9 ABC transporter substrate-binding protein compare
CCNA_03078 +0.5 0.6 Arc/MetJ-family transcriptional regulator compare
CCNA_00149 +0.5 1.8 Cro/CI-family transcriptional regulator compare
CCNA_00897 +0.5 1.6 hypothetical protein compare
CCNA_01931 +0.5 3.2 TetR-family transcriptional regulator compare
CCNA_01681 +0.5 2.8 RimI-like acetyltransferase compare
CCNA_01813 +0.5 2.9 tRNA-dihydrouridine synthase compare
CCNA_01366 +0.5 1.4 hypothetical protein compare
CCNA_02728 +0.5 3.4 hypothetical protein compare
CCNA_01173 +0.5 2.9 chorismate mutase compare
CCNA_01443 +0.4 2.5 hypothetical protein compare
CCNA_02273 +0.4 3.0 glutathione peroxidase compare
CCNA_01804 +0.4 2.8 glutathione peroxidase compare
CCNA_01745 +0.4 2.6 thioredoxin peroxidase compare
CCNA_01528 +0.4 3.1 flagellin fljK compare
CCNA_01728 +0.4 2.7 short chain dehydrogenase compare
CCNA_02858 +0.4 3.3 hipA-family phosphatidylinositol 3/4-kinase compare
CCNA_02297 +0.4 2.1 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01501 +0.4 1.6 protein kinase C-like superfamily protein compare
CCNA_03515 +0.4 1.3 hypothetical protein compare
CCNA_01562 +0.4 2.0 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase compare
CCNA_03107 +0.4 2.8 cytidine deaminase compare
CCNA_00555 +0.4 2.6 nitrogen regulatory protein P-II compare
CCNA_00930 +0.4 3.2 riboflavin synthase alpha chain compare
CCNA_03289 +0.4 2.4 HicB-family RNA-binding protein compare
CCNA_02933 +0.4 3.6 aminopeptidase compare
CCNA_03952 +0.4 2.6 hypothetical protein compare
CCNA_01818 +0.4 2.3 D-alanine aminotransferase compare
CCNA_02011 +0.4 2.4 methylmalonyl CoA epimerase compare
CCNA_03674 +0.4 2.8 hypothetical protein compare
CCNA_02028 +0.4 0.4 NTF2 superfamily protein compare
CCNA_02644 +0.4 0.9 cell division protein FtsL compare
CCNA_03325 +0.4 2.3 hypothetical protein compare
CCNA_01679 +0.4 2.8 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01670 +0.4 2.6 sulfate transport ATP-binding protein cysA compare
CCNA_02259 +0.4 2.2 hypothetical protein compare
CCNA_00497 +0.4 3.3 putative rhamnosyl transferase compare
CCNA_01778 +0.4 3.1 penicillin-binding protein compare
CCNA_02551 +0.4 2.3 hypothetical protein compare
CCNA_03892 +0.4 2.6 HD family metal-dependent phosphohydrolase compare
CCNA_02241 +0.4 1.5 endoribonuclease L-PSP compare
CCNA_00931 +0.4 2.8 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_03733 +0.4 3.5 mannose-1-phosphate guanylyltransferase compare
CCNA_00726 +0.4 3.2 acyl-CoA dehydrogenase compare
CCNA_02347 +0.4 3.3 phosphomannomutase/phosphoglucomutase compare
CCNA_03150 +0.4 1.6 hypothetical protein compare
CCNA_02986 +0.4 3.2 hypothetical protein compare
CCNA_03104 +0.4 2.5 3-dehydroquinate synthase compare
CCNA_03989 +0.4 3.3 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03981 +0.4 1.7 hypothetical protein compare
CCNA_03123 +0.4 2.5 ArsR-family transcriptional regulator compare
CCNA_03064 +0.4 2.0 PadR-family transcriptional regulator compare
CCNA_01526 +0.4 2.1 flagellar biosynthesis regulatory protein flaF compare
CCNA_01680 +0.4 2.9 succinylarginine dihydrolase compare
CCNA_01338 +0.4 2.4 glyoxalase family protein compare
CCNA_00860 +0.4 1.3 holdfast inhibitor protein HfiA compare
CCNA_01184 +0.4 2.6 MutT/nudix family hydrolase compare
CCNA_03979 +0.4 1.3 hypothetical protein compare
CCNA_03700 +0.4 2.0 large-conductance mechanosensitive channel compare
CCNA_03499 +0.4 2.1 hypothetical protein compare
CCNA_01393 +0.4 3.5 soluble lytic murein transglycosylase compare
CCNA_01092 +0.4 2.1 ACT domain protein compare
CCNA_01179 +0.4 2.1 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase compare
CCNA_02983 +0.4 2.8 polyprenyl-phosphate beta-D-glucosyltransferase compare
CCNA_03460 +0.4 1.7 hypothetical protein compare
CCNA_01453 +0.4 1.6 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01848 +0.4 2.7 quinol cytochrome oxidase polypeptide IV compare
CCNA_00699 +0.4 1.9 LSU ribosomal protein L28P compare
CCNA_00107 +0.4 1.4 Trm112p-like protein compare
CCNA_01541 +0.4 2.8 LysR-family transcriptional regulator compare
CCNA_01827 +0.4 2.4 cobyric acid synthase CobQ compare
CCNA_02601 +0.4 3.1 glutathione-dependent formaldehyde dehydrogenase compare
CCNA_R0054 +0.4 1.0 tRNA-Gly compare
CCNA_03072 +0.4 1.5 TetR-family transcriptional regulator compare
CCNA_02805 +0.4 1.7 hypothetical protein compare
CCNA_01777 +0.4 2.9 hybrid sensor histidine kinase/receiver domain protein compare
CCNA_02330 +0.4 1.6 hypothetical protein compare
CCNA_01270 +0.4 0.7 hypothetical protein compare
CCNA_00946 +0.4 2.2 Basal-body rod modification protein FlgD compare
CCNA_02810 +0.4 2.4 PII-like signaling protein compare
CCNA_01056 +0.4 3.1 methyltransferase compare
CCNA_03808 +0.4 2.7 organic solvent resistance transport system Ttg2C protein compare
CCNA_01177 +0.4 2.3 sulfite reductase, beta subunit compare
CCNA_01235 +0.4 2.4 AcrR-family transcriptional regulator compare
CCNA_02036 +0.4 1.4 DNA-binding protein HU compare
CCNA_03214 +0.4 2.1 hypothetical protein compare
CCNA_01295 +0.4 2.5 integral membrane protein compare
CCNA_01752 +0.4 2.0 YicC-family protein compare
CCNA_01754 +0.4 1.4 transglycosylase associated protein compare
CCNA_01055 +0.4 2.7 GT1 family glyscosyl transferase compare
CCNA_02619 +0.4 3.0 stomatin/prohibitin-related protein compare
CCNA_00895 +0.4 1.9 hypothetical protein compare
CCNA_02249 +0.4 0.9 conserved hypothetical cytosolic protein compare
CCNA_01619 +0.4 2.3 NYN domain protein compare
CCNA_03744 +0.3 2.9 dTDP-glucose 4,6-dehydratase compare
CCNA_02591 +0.3 1.6 glutaredoxin compare
CCNA_02338 +0.3 2.4 hypothetical protein compare
CCNA_00929 +0.3 2.9 Riboflavin-specific deaminase family protein compare
CCNA_01276 +0.3 1.4 cytochrome c5 compare
CCNA_02205 +0.3 2.6 hypothetical protein compare
CCNA_03490 +0.3 1.4 hypothetical protein compare
CCNA_03493 +0.3 1.3 ADP-ribose pyrophosphatase, nudix family compare
CCNA_01367 +0.3 2.5 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
CCNA_00845 +0.3 1.5 antitoxin protein relB-1 compare
CCNA_00762 +0.3 1.4 hypothetical protein compare
CCNA_01820 +0.3 2.4 GTP-binding protein hflX compare
CCNA_00834 +0.3 2.3 flagellin FljM compare
CCNA_01193 +0.3 2.8 amylosucrase compare
CCNA_02698 +0.3 2.4 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_02561 +0.3 2.6 stalk cross-band protein StpB compare
CCNA_02955 +0.3 2.6 putative anion permease compare
CCNA_03888 +0.3 1.9 hypothetical protein compare
CCNA_01199 +0.3 2.1 glucose-1-phosphate thymidylyltransferase compare
CCNA_03673 +0.3 2.4 hypothetical protein compare
CCNA_02957 +0.3 1.1 ArsR-family transcriptional regulator compare
CCNA_01066 +0.3 2.5 glycosyltransferase compare
CCNA_00669 +0.3 3.0 glycosyltransferase family 99 protein WbsX compare
CCNA_02712 +0.3 2.3 holdfast attachment protein hfaB compare
CCNA_01543 +0.3 2.2 chaperone protein dnaK compare
CCNA_02796 +0.3 1.0 hypothetical protein compare
CCNA_02609 +0.3 2.3 membrane transport protein compare
CCNA_01593 +0.3 2.0 Xaa-pro aminopeptidase compare
CCNA_02363 +0.3 2.0 hypothetical protein compare
CCNA_02367 +0.3 2.5 CelR-family transcriptional regulator compare
CCNA_02761 +0.3 1.8 hypothetical protein compare
CCNA_00625 +0.3 2.5 two-component receiver domain protein compare
CCNA_00016 +0.3 1.7 molybdopterin converting factor, large subunit compare
CCNA_01531 +0.3 2.6 acetyltransferase compare
CCNA_02567 +0.3 2.6 sensory transduction histidine kinase pleC compare
CCNA_00847 +0.3 1.9 leucine-responsive regulatory protein compare
CCNA_01655 +0.3 2.0 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02348 +0.3 1.4 acetyltransferase, GNAT family compare
CCNA_00706 +0.3 1.7 hypothetical protein compare
CCNA_03479 +0.3 2.2 MarR-family transcriptional regulator compare
CCNA_02335 +0.3 1.8 inositol monophosphatase family protein compare
CCNA_01847 +0.3 2.3 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02414 +0.3 1.8 DadA-related amino acid oxidase compare
CCNA_03216 +0.3 1.4 hypothetical protein compare
CCNA_02760 +0.3 1.1 hypothetical protein compare
CCNA_00028 +0.3 1.3 TonB-dependent receptor compare
CCNA_01646 +0.3 2.0 dethiobiotin synthetase compare
CCNA_02351 +0.3 2.3 uracil phosphoribosyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For stress CHIR-090 in Caulobacter crescentus NA1000

For stress CHIR-090 across organisms