Experiment set8IT069 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -9.5 -5.0 histidinol-phosphate transaminase compare
BWI76_RS20965 -9.0 -4.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18955 -8.7 -5.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11965 -8.6 -5.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS07065 -8.6 -6.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20355 -8.5 -4.6 colicin V production protein compare
BWI76_RS00805 -8.2 -5.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04675 -8.1 -5.6 3-isopropylmalate dehydrogenase compare
BWI76_RS11860 -8.1 -5.6 anthranilate synthase component I compare
BWI76_RS00990 -7.8 -5.4 ketol-acid reductoisomerase compare
BWI76_RS11850 -7.7 -9.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04670 -7.6 -7.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS23365 -7.6 -3.9 LysR family transcriptional regulator compare
BWI76_RS09755 -7.6 -5.2 phosphoserine transaminase compare
BWI76_RS09760 -7.5 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18940 -7.4 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04470 -7.3 -5.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS00855 -7.3 -5.0 argininosuccinate lyase compare
BWI76_RS23920 -7.2 -4.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04160 -7.1 -6.5 phosphoserine phosphatase compare
BWI76_RS21475 -7.1 -6.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS21265 -7.1 -11.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18920 -7.0 -4.3 ATP phosphoribosyltransferase compare
BWI76_RS04465 -7.0 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04685 -6.9 -8.2 putative leucine operon leader peptide compare
BWI76_RS22755 -6.8 -6.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04645 -6.8 -4.7 3-dehydroquinase compare
BWI76_RS18925 -6.7 -5.9 histidinol dehydrogenase compare
BWI76_RS04250 -6.7 -6.5 homoserine kinase compare
BWI76_RS00850 -6.7 -7.2 acetylglutamate kinase compare
BWI76_RS23220 -6.6 -7.4 amino-acid N-acetyltransferase compare
BWI76_RS05835 -6.6 -4.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS18950 -6.4 -4.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS08385 -6.3 -3.0 citrate (Si)-synthase compare
BWI76_RS09645 -6.3 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS20895 -6.2 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS25115 -6.1 -7.0 argininosuccinate synthase compare
BWI76_RS04665 -6.1 -17.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS13920 -6.0 -7.5 magnesium-translocating P-type ATPase compare
BWI76_RS10990 -6.0 -2.9 dihydroorotase compare
BWI76_RS04255 -6.0 -8.2 threonine synthase compare
BWI76_RS05840 -5.9 -5.8 glutamate 5-kinase compare
BWI76_RS04245 -5.9 -12.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS01610 -5.9 -5.6 phosphoribosylamine--glycine ligase compare
BWI76_RS07070 -5.8 -5.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00980 -5.7 -9.6 PLP-dependent threonine dehydratase compare
BWI76_RS01655 -5.7 -5.5 homoserine O-succinyltransferase compare
BWI76_RS11840 -5.6 -2.4 tryptophan synthase subunit alpha compare
BWI76_RS22690 -5.6 -3.6 adenylyl-sulfate kinase compare
BWI76_RS11855 -5.4 -4.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS26085 -5.4 -2.9 3-dehydroquinate synthase compare
BWI76_RS22765 -5.3 -9.5 sulfite reductase subunit alpha compare
BWI76_RS02995 -5.3 -7.0 aspartate carbamoyltransferase compare
BWI76_RS18935 -5.2 -5.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20350 -5.2 -3.7 amidophosphoribosyltransferase compare
BWI76_RS26570 -5.0 -3.5 anion permease compare
BWI76_RS27390 -5.0 -4.3 ribonuclease PH compare
BWI76_RS04510 -4.9 -2.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01615 -4.9 -9.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23360 -4.8 -4.1 diaminopimelate decarboxylase compare
BWI76_RS24285 -4.8 -5.7 cystathionine beta-lyase compare
BWI76_RS01885 -4.8 -1.5 CsbD family protein compare
BWI76_RS00975 -4.8 -6.3 dihydroxy-acid dehydratase compare
BWI76_RS25645 -4.8 -7.3 shikimate dehydrogenase compare
BWI76_RS27385 -4.7 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS00785 -4.6 -6.2 cystathionine gamma-synthase compare
BWI76_RS09910 -4.6 -13.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02530 -4.5 -3.1 tRNA dimethylallyltransferase compare
BWI76_RS10035 -4.5 -2.0 hypothetical protein compare
BWI76_RS22760 -4.5 -6.3 sulfite reductase subunit beta compare
BWI76_RS03010 -4.5 -5.6 ornithine carbamoyltransferase compare
BWI76_RS14575 -4.4 -2.7 TENA/THI-4 family protein compare
BWI76_RS23480 -4.4 -13.9 EAL domain-containing protein compare
BWI76_RS01200 -4.4 -3.0 diaminopimelate epimerase compare
BWI76_RS00985 -4.3 -5.4 transcriptional regulator IlvY compare
BWI76_RS06680 -4.3 -1.3 hypothetical protein compare
BWI76_RS04680 -4.3 -8.8 2-isopropylmalate synthase compare
BWI76_RS11845 -4.2 -2.3 tryptophan synthase subunit beta compare
BWI76_RS16485 -4.1 -1.7 ribonuclease T compare
BWI76_RS24900 -4.1 -2.5 DeoR family transcriptional regulator compare
BWI76_RS15115 -4.0 -3.9 MFS transporter compare
BWI76_RS00835 -3.9 -8.2 phosphoenolpyruvate carboxylase compare
BWI76_RS25065 -3.8 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS25320 -3.8 -5.5 glutamate synthase compare
BWI76_RS00390 -3.7 -4.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS00845 -3.7 -6.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20435 -3.6 -1.6 chorismate synthase compare
BWI76_RS00960 -3.6 -3.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26045 -3.6 -2.3 nitrite reductase small subunit compare
BWI76_RS26000 -3.5 -4.8 aspartate aminotransferase family protein compare
BWI76_RS00400 -3.5 -1.9 glutamine synthetase compare
BWI76_RS25315 -3.5 -6.7 glutamate synthase large subunit compare
BWI76_RS00180 -3.4 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04240 -3.4 -2.0 thr operon leader peptide compare
BWI76_RS04530 -3.4 -2.3 peptidylprolyl isomerase SurA compare
BWI76_RS06765 -3.4 -2.1 transcriptional regulator compare
BWI76_RS23240 -3.4 -2.3 exonuclease V subunit gamma compare
BWI76_RS01210 -3.3 -2.1 tyrosine recombinase XerC compare
BWI76_RS26055 -3.3 -6.1 siroheme synthase compare
BWI76_RS04100 -3.3 -3.9 peptide chain release factor 3 compare
BWI76_RS20970 -3.2 -1.4 phosphoribosylglycinamide formyltransferase compare
BWI76_RS21580 -3.2 -2.1 SsrA-binding protein compare
BWI76_RS20650 -3.1 -2.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01185 -3.1 -2.1 adenylate cyclase compare
BWI76_RS25485 -3.1 -1.4 septum formation protein Maf compare
BWI76_RS00385 -3.0 -5.3 nitrogen assimilation regulatory protein compare
BWI76_RS16210 -2.9 -1.7 hypothetical protein compare
BWI76_RS08720 -2.8 -1.4 imidazolonepropionase compare
BWI76_RS23230 -2.8 -1.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS05200 -2.7 -2.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS02735 -2.7 -3.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS18755 -2.7 -1.2 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS15225 -2.7 -2.8 DeoR family transcriptional regulator compare
BWI76_RS21505 -2.6 -1.2 hypothetical protein compare
BWI76_RS06770 -2.6 -7.6 Hha toxicity attenuator compare
BWI76_RS05450 -2.6 -1.4 ribonuclease HI compare
BWI76_RS00095 -2.6 -2.5 DNA-binding transcriptional regulator compare
BWI76_RS06530 -2.5 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS20380 -2.5 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS23265 -2.4 -2.4 hypothetical protein compare
BWI76_RS23895 -2.4 -1.6 Xaa-Pro aminopeptidase compare
BWI76_RS20490 -2.4 -3.0 hypothetical protein compare
BWI76_RS06525 -2.4 -3.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS13915 -2.4 -4.9 magnesium transport protein MgtC compare
BWI76_RS18125 -2.3 -2.3 murein DD-endopeptidase MepM compare
BWI76_RS21465 -2.3 -1.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS03815 -2.3 -1.5 hypothetical protein compare
BWI76_RS09190 -2.2 -3.9 hypothetical protein compare
BWI76_RS11820 -2.2 -1.2 short-chain dehydrogenase/reductase SDR compare
BWI76_RS21075 -2.2 -1.8 membrane protein compare
BWI76_RS20155 -2.2 -1.7 NADH-quinone oxidoreductase subunit I compare
BWI76_RS01195 -2.1 -1.5 membrane protein compare
BWI76_RS05790 -2.1 -1.3 phage DNA-binding protein compare
BWI76_RS16535 -2.0 -3.9 MATE family efflux transporter conserved
BWI76_RS24025 -2.0 -5.6 agmatinase compare
BWI76_RS06800 -2.0 -1.1 DUF2496 domain-containing protein compare
BWI76_RS21480 -2.0 -3.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS20795 -2.0 -1.1 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS06470 -1.9 -2.8 hypothetical protein compare
BWI76_RS13600 -1.9 -2.3 hypothetical protein compare
BWI76_RS09655 -1.9 -3.0 leucine-responsive regulatory protein compare
BWI76_RS11980 -1.9 -1.5 DeoR family transcriptional regulator compare
BWI76_RS21980 -1.9 -1.8 hypothetical protein compare
BWI76_RS13095 -1.9 -1.2 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS21070 -1.9 -1.3 outer membrane protein assembly factor BamB compare
BWI76_RS17805 -1.9 -1.0 membrane protein compare
BWI76_RS25070 -1.8 -1.2 hypothetical protein compare
BWI76_RS09660 -1.8 -1.5 DNA translocase FtsK compare
BWI76_RS23020 -1.8 -1.9 cobalamin biosynthesis protein CbiQ compare
BWI76_RS21140 -1.8 -1.6 molecular chaperone HscA compare
BWI76_RS15110 -1.8 -6.9 putative excinuclease ABC subunit A compare
BWI76_RS06510 -1.8 -1.8 BolA family transcriptional regulator compare
BWI76_RS17935 -1.7 -2.4 DUF2627 domain-containing protein compare
BWI76_RS14320 -1.7 -2.0 hypothetical protein compare
BWI76_RS18550 -1.7 -1.2 tRNA-Asn compare
BWI76_RS14155 -1.7 -1.9 transketolase compare
BWI76_RS06015 -1.7 -1.3 hypothetical protein compare
BWI76_RS18240 -1.7 -1.3 L-arabinose ABC transporter permease AraH compare
BWI76_RS20640 -1.7 -2.6 cysteine synthase A compare
BWI76_RS04605 -1.7 -1.0 thiamine ABC transporter ATP-binding protein compare
BWI76_RS17565 -1.7 -1.4 hypothetical protein compare
BWI76_RS25060 -1.6 -2.3 lipoprotein NlpI compare
BWI76_RS15060 -1.6 -1.7 MarR family transcriptional regulator compare
BWI76_RS10945 -1.6 -1.7 SecY/SecA suppressor protein compare
BWI76_RS15835 -1.6 -1.4 hypothetical protein compare
BWI76_RS23055 -1.6 -2.9 cobalamin biosynthesis protein CbiG compare
BWI76_RS15930 -1.6 -2.7 dimethylsulfoxide reductase, chain B compare
BWI76_RS15830 -1.6 -2.3 hypothetical protein compare
BWI76_RS25335 -1.5 -2.2 stringent starvation protein A compare
BWI76_RS13250 -1.5 -0.9 cytochrome b561 compare
BWI76_RS25425 -1.5 -1.3 arginine repressor compare
BWI76_RS21570 -1.5 -1.7 RnfH family protein compare
BWI76_RS18715 -1.5 -3.4 hypothetical protein compare
BWI76_RS16035 -1.5 -1.4 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS11255 -1.5 -1.3 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS21350 -1.5 -2.6 anti-RNA polymerase sigma factor SigE compare
BWI76_RS27820 -1.5 -1.3 ilvB operon leader peptide IvbL compare
BWI76_RS06665 -1.5 -1.8 membrane protein compare
BWI76_RS03105 -1.5 -0.8 myo-inosose-2 dehydratase compare
BWI76_RS18065 -1.5 -1.2 DNA polymerase III subunit theta compare
BWI76_RS09640 -1.5 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS24720 -1.4 -1.3 hypothetical protein compare
BWI76_RS11150 -1.4 -1.1 membrane protein compare
BWI76_RS11440 -1.4 -0.9 hypothetical protein compare
BWI76_RS23810 -1.4 -1.9 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS00355 -1.4 -1.3 DNA polymerase I compare
BWI76_RS25160 -1.4 -1.2 transcription elongation factor GreA compare
BWI76_RS00025 -1.4 -0.6 hypothetical protein compare
BWI76_RS20050 -1.4 -1.0 hypothetical protein compare
BWI76_RS17235 -1.4 -2.9 peptide ABC transporter permease compare
BWI76_RS19240 -1.4 -1.1 ABC transporter substrate-binding protein compare
BWI76_RS19755 -1.4 -3.2 fructuronate reductase compare
BWI76_RS17860 -1.4 -1.3 YoaH family protein compare
BWI76_RS27865 -1.4 -2.7 hypothetical protein compare
BWI76_RS15660 -1.4 -0.7 hypothetical protein compare
BWI76_RS09650 -1.3 -2.9 hypothetical protein compare
BWI76_RS11260 -1.3 -1.2 hypothetical protein compare
BWI76_RS01775 -1.3 -0.7 hypothetical protein compare
BWI76_RS10735 -1.3 -1.4 hypothetical protein compare
BWI76_RS17665 -1.3 -1.7 proteasome-type protease compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms