Experiment set8IT067 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS19845 -11.3 -7.8 phosphatase compare
BWI76_RS13920 -8.1 -7.9 magnesium-translocating P-type ATPase compare
BWI76_RS18935 -8.0 -9.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18940 -7.5 -7.3 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS20965 -7.5 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS24285 -7.5 -8.9 cystathionine beta-lyase compare
BWI76_RS00805 -7.5 -5.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS20895 -7.3 -7.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS10990 -7.1 -4.0 dihydroorotase compare
BWI76_RS23360 -7.0 -4.8 diaminopimelate decarboxylase compare
BWI76_RS09645 -7.0 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS11965 -7.0 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01325 -6.8 -4.4 twin-arginine translocase subunit TatB compare
BWI76_RS01800 -6.8 -4.7 glucose-6-phosphate isomerase compare
BWI76_RS09755 -6.8 -10.4 phosphoserine transaminase compare
BWI76_RS04685 -6.7 -12.8 putative leucine operon leader peptide compare
BWI76_RS01655 -6.7 -7.8 homoserine O-succinyltransferase compare
BWI76_RS11840 -6.6 -3.2 tryptophan synthase subunit alpha compare
BWI76_RS21475 -6.6 -8.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01330 -6.5 -4.5 twin-arginine translocase subunit TatC compare
BWI76_RS11860 -6.5 -10.9 anthranilate synthase component I compare
BWI76_RS18925 -6.5 -8.9 histidinol dehydrogenase compare
BWI76_RS18920 -6.5 -5.7 ATP phosphoribosyltransferase compare
BWI76_RS26085 -6.5 -4.2 3-dehydroquinate synthase compare
BWI76_RS00785 -6.4 -7.6 cystathionine gamma-synthase compare
BWI76_RS04675 -6.3 -9.0 3-isopropylmalate dehydrogenase compare
BWI76_RS04670 -6.3 -11.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS03010 -6.3 -9.8 ornithine carbamoyltransferase compare
BWI76_RS24400 -6.2 -8.5 outer membrane channel protein TolC compare
BWI76_RS21265 -6.1 -11.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS26570 -6.1 -4.2 anion permease compare
BWI76_RS04465 -6.1 -5.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -6.0 -11.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS23920 -5.9 -5.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS05840 -5.9 -5.7 glutamate 5-kinase compare
BWI76_RS07065 -5.8 -8.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS11850 -5.8 -10.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04255 -5.7 -12.2 threonine synthase compare
BWI76_RS01615 -5.7 -10.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20350 -5.6 -5.6 amidophosphoribosyltransferase compare
BWI76_RS19840 -5.6 -2.2 hypothetical protein compare
BWI76_RS04665 -5.6 -18.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04245 -5.5 -14.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS07070 -5.4 -6.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00850 -5.4 -9.4 acetylglutamate kinase compare
BWI76_RS18930 -5.4 -4.8 histidinol-phosphate transaminase compare
BWI76_RS04250 -5.3 -6.5 homoserine kinase compare
BWI76_RS15115 -5.3 -3.7 MFS transporter compare
BWI76_RS25230 -5.3 -8.9 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS00990 -5.3 -10.1 ketol-acid reductoisomerase compare
BWI76_RS00980 -5.2 -12.2 PLP-dependent threonine dehydratase compare
BWI76_RS00975 -5.2 -11.0 dihydroxy-acid dehydratase compare
BWI76_RS00855 -5.2 -9.0 argininosuccinate lyase compare
BWI76_RS23220 -5.2 -6.1 amino-acid N-acetyltransferase compare
BWI76_RS25225 -5.0 -10.1 ABC transporter permease compare
BWI76_RS23265 -5.0 -4.4 hypothetical protein compare
BWI76_RS04645 -4.9 -6.9 3-dehydroquinase compare
BWI76_RS23365 -4.9 -8.1 LysR family transcriptional regulator compare
BWI76_RS05835 -4.9 -5.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS18950 -4.8 -3.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00960 -4.8 -6.3 acetolactate synthase 2 catalytic subunit compare
BWI76_RS11855 -4.7 -7.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01610 -4.7 -4.9 phosphoribosylamine--glycine ligase compare
BWI76_RS25115 -4.7 -6.5 argininosuccinate synthase compare
BWI76_RS04680 -4.7 -12.5 2-isopropylmalate synthase compare
BWI76_RS18955 -4.6 -4.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00400 -4.6 -3.0 glutamine synthetase compare
BWI76_RS06765 -4.5 -6.1 transcriptional regulator compare
BWI76_RS25215 -4.5 -8.5 phospholipid-binding protein MlaC compare
BWI76_RS02995 -4.5 -11.6 aspartate carbamoyltransferase compare
BWI76_RS27385 -4.5 -9.7 orotate phosphoribosyltransferase compare
BWI76_RS09910 -4.4 -17.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04160 -4.4 -4.1 phosphoserine phosphatase compare
BWI76_RS09760 -4.4 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08385 -4.4 -4.4 citrate (Si)-synthase compare
BWI76_RS06525 -4.4 -4.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS11845 -4.4 -4.7 tryptophan synthase subunit beta compare
BWI76_RS00835 -4.4 -10.2 phosphoenolpyruvate carboxylase compare
BWI76_RS25220 -4.3 -3.7 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS20435 -4.3 -2.3 chorismate synthase compare
BWI76_RS00180 -4.2 -2.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS25645 -4.2 -8.8 shikimate dehydrogenase compare
BWI76_RS02815 -4.1 -3.6 fructose-bisphosphatase class I compare
BWI76_RS26665 -4.1 -3.7 DNA-binding response regulator compare
BWI76_RS20475 -4.1 -7.3 phospholipid-binding lipoprotein MlaA compare
BWI76_RS20650 -4.1 -2.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04240 -4.0 -3.5 thr operon leader peptide compare
BWI76_RS00845 -4.0 -7.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00985 -4.0 -6.2 transcriptional regulator IlvY compare
BWI76_RS00345 -3.8 -5.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS06530 -3.7 -8.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS23240 -3.6 -3.5 exonuclease V subunit gamma compare
BWI76_RS01185 -3.5 -3.4 adenylate cyclase compare
BWI76_RS00965 -3.5 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS01210 -3.4 -3.5 tyrosine recombinase XerC compare
BWI76_RS21465 -3.4 -3.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18135 -3.4 -5.8 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS04530 -3.4 -3.1 peptidylprolyl isomerase SurA compare
BWI76_RS02530 -3.3 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS15225 -3.3 -2.3 DeoR family transcriptional regulator compare
BWI76_RS21070 -3.3 -2.6 outer membrane protein assembly factor BamB compare
BWI76_RS20355 -3.3 -4.8 colicin V production protein compare
BWI76_RS23230 -3.2 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS25065 -3.1 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS26670 -3.1 -7.4 two-component sensor histidine kinase compare
BWI76_RS27310 -3.0 -11.0 glycosyltransferase compare
BWI76_RS04510 -3.0 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS18130 -3.0 -3.7 zinc ABC transporter substrate-binding protein compare
BWI76_RS03045 -3.0 -1.9 hypothetical protein compare
BWI76_RS24080 -2.9 -3.8 DUF179 domain-containing protein compare
BWI76_RS09660 -2.9 -2.6 DNA translocase FtsK compare
BWI76_RS23480 -2.9 -12.3 EAL domain-containing protein compare
BWI76_RS09655 -2.8 -5.9 leucine-responsive regulatory protein compare
BWI76_RS27390 -2.7 -3.3 ribonuclease PH compare
BWI76_RS26000 -2.7 -7.5 aspartate aminotransferase family protein compare
BWI76_RS18140 -2.7 -6.9 zinc ABC transporter permease compare
BWI76_RS27165 -2.7 -5.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS23885 -2.7 -2.4 2-octaprenylphenol hydroxylase compare
BWI76_RS17975 -2.7 -5.1 tail-specific protease compare
BWI76_RS26455 -2.6 -4.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04715 -2.5 -2.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS04305 -2.5 -1.7 molecular chaperone DnaJ compare
BWI76_RS06780 -2.5 -7.1 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS04705 -2.4 -6.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS26460 -2.4 -4.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS06775 -2.3 -9.3 multidrug efflux RND transporter permease subunit compare
BWI76_RS24850 -2.2 -8.9 DeoR family transcriptional regulator compare
BWI76_RS01200 -2.2 -2.2 diaminopimelate epimerase compare
BWI76_RS00720 -2.2 -2.2 DNA-binding response regulator compare
BWI76_RS19905 -2.2 -4.9 OmpK36 porin compare
BWI76_RS01350 -2.2 -1.7 NAD(P)H-flavin reductase compare
BWI76_RS01275 -2.2 -7.7 LysR family transcriptional regulator compare
BWI76_RS13915 -2.1 -4.4 magnesium transport protein MgtC compare
BWI76_RS01110 -2.1 -4.2 TDP-fucosamine acetyltransferase compare
BWI76_RS17720 -2.1 -1.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS08525 -2.1 -4.0 colicin transporter compare
BWI76_RS15110 -2.1 -10.9 putative excinuclease ABC subunit A compare
BWI76_RS21580 -2.1 -2.4 SsrA-binding protein compare
BWI76_RS21350 -2.0 -3.5 anti-RNA polymerase sigma factor SigE compare
BWI76_RS02735 -2.0 -3.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20270 -2.0 -9.0 hypothetical protein compare
BWI76_RS20180 -2.0 -5.2 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS06770 -1.9 -8.3 Hha toxicity attenuator compare
BWI76_RS01115 -1.9 -3.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20440 -1.9 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS15955 -1.9 -5.3 transcriptional regulator compare
BWI76_RS26620 -1.9 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS05260 -1.8 -2.1 chaperone compare
BWI76_RS26200 -1.8 -5.6 starch synthase compare
BWI76_RS09650 -1.8 -6.3 hypothetical protein compare
BWI76_RS00875 -1.8 -5.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS05135 -1.8 -4.2 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS25300 -1.8 -4.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS08530 -1.7 -3.2 protein TolA compare
BWI76_RS08210 -1.7 -2.4 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS13595 -1.7 -3.3 transcriptional regulator compare
BWI76_RS21165 -1.7 -2.2 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS25320 -1.7 -5.5 glutamate synthase compare
BWI76_RS25315 -1.7 -10.3 glutamate synthase large subunit compare
BWI76_RS15850 -1.7 -1.0 DUF1317 domain-containing protein compare
BWI76_RS08500 -1.7 -3.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20170 -1.7 -4.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS01090 -1.7 -5.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS00390 -1.7 -4.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS24900 -1.6 -2.3 DeoR family transcriptional regulator compare
BWI76_RS06015 -1.6 -2.2 hypothetical protein compare
BWI76_RS01080 -1.6 -7.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS16995 -1.6 -9.1 Fe-S cluster assembly protein SufB compare
BWI76_RS22755 -1.6 -4.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS17190 -1.6 -4.0 TonB system transport protein TonB compare
BWI76_RS01135 -1.6 -4.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS20190 -1.6 -5.1 NADH-quinone oxidoreductase subunit A compare
BWI76_RS16965 -1.6 -1.6 murein lipoprotein compare
BWI76_RS16490 -1.6 -2.7 glutaredoxin compare
BWI76_RS08495 -1.6 -3.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS05015 -1.6 -1.6 transcriptional regulator compare
BWI76_RS22690 -1.6 -2.6 adenylyl-sulfate kinase compare
BWI76_RS01125 -1.5 -5.4 4-alpha-L-fucosyltransferase compare
BWI76_RS20165 -1.5 -5.8 NADH-quinone oxidoreductase subunit G compare
BWI76_RS20900 -1.5 -1.8 outer membrane protein assembly factor BamC compare
BWI76_RS21000 -1.5 -5.0 exopolyphosphatase compare
BWI76_RS05200 -1.5 -2.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS19850 -1.5 -2.8 tRNA-Pro compare
BWI76_RS19805 -1.5 -2.5 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS01095 -1.5 -3.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS05140 -1.5 -3.9 Fe3+-hydroxamate ABC transporter permease FhuB conserved
BWI76_RS12950 -1.5 -3.5 acriflavin resistance protein AcrA compare
BWI76_RS12090 -1.5 -1.2 HNH endonuclease compare
BWI76_RS20130 -1.5 -4.5 NADH-quinone oxidoreductase subunit N compare
BWI76_RS15840 -1.4 -2.2 prophage protein compare
BWI76_RS05130 -1.4 -5.2 iron-hydroxamate transporter ATP-binding subunit conserved
BWI76_RS24025 -1.4 -6.6 agmatinase compare
BWI76_RS20160 -1.4 -2.0 NADH-quinone oxidoreductase subunit H compare
BWI76_RS12955 -1.4 -9.1 multidrug efflux RND transporter permease subunit OqxB compare
BWI76_RS00970 -1.4 -2.2 branched chain amino acid aminotransferase compare
BWI76_RS27290 -1.4 -6.5 hypothetical protein compare
BWI76_RS01870 -1.4 -5.6 diacylglycerol kinase compare
BWI76_RS15060 -1.4 -2.9 MarR family transcriptional regulator compare
BWI76_RS22625 -1.4 -2.1 transcriptional regulator compare
BWI76_RS26395 -1.4 -3.2 cell division protein FtsE compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms