Experiment set8IT065 for Herbaspirillum seropedicae SmR1

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Group: supernatant
Media: + supernatant from Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered (1 X)
Culturing: HerbieS_ML4a, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Cat_Manuel_Trenton on 3/3/21

Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Herbaspirillum seropedicae SmR1

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms

SEED Subsystems

Subsystem	#Specific
NAD and NADP cofactor biosynthesis global	1
NAD regulation	1
Redox-dependent regulation of nucleus processes	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Nicotinate and nicotinamide metabolism
• Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
NAD salvage pathway V (PNC V cycle)	5	4	1
NAD salvage pathway I (PNC VI cycle)	7	6	1
NAD salvage (plants)	11	6	1
superpathway of NAD biosynthesis in eukaryotes	14	7	1