Experiment set8IT064 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS04160 -8.1 -7.9 phosphoserine phosphatase compare
BWI76_RS18930 -8.1 -6.0 histidinol-phosphate transaminase compare
BWI76_RS04255 -7.9 -7.7 threonine synthase compare
BWI76_RS00850 -7.4 -10.2 acetylglutamate kinase compare
BWI76_RS04470 -7.4 -8.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS18955 -7.3 -6.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00805 -7.3 -5.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04675 -7.3 -8.6 3-isopropylmalate dehydrogenase compare
BWI76_RS21475 -7.2 -8.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS24285 -7.1 -9.8 cystathionine beta-lyase compare
BWI76_RS00785 -7.0 -6.8 cystathionine gamma-synthase compare
BWI76_RS05840 -6.9 -6.8 glutamate 5-kinase compare
BWI76_RS09755 -6.9 -7.7 phosphoserine transaminase compare
BWI76_RS09645 -6.8 -2.8 thioredoxin-disulfide reductase compare
BWI76_RS04465 -6.7 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18935 -6.6 -8.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20355 -6.5 -4.2 colicin V production protein compare
BWI76_RS04685 -6.4 -12.3 putative leucine operon leader peptide compare
BWI76_RS26085 -6.3 -4.4 3-dehydroquinate synthase compare
BWI76_RS20350 -6.3 -8.5 amidophosphoribosyltransferase compare
BWI76_RS18920 -6.2 -5.7 ATP phosphoribosyltransferase compare
BWI76_RS01655 -6.2 -8.2 homoserine O-succinyltransferase compare
BWI76_RS07070 -6.2 -7.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00990 -6.2 -10.1 ketol-acid reductoisomerase compare
BWI76_RS11855 -6.1 -5.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23365 -6.0 -7.2 LysR family transcriptional regulator compare
BWI76_RS00980 -6.0 -12.9 PLP-dependent threonine dehydratase compare
BWI76_RS20895 -5.9 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04665 -5.9 -20.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21265 -5.9 -14.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00855 -5.8 -7.7 argininosuccinate lyase compare
BWI76_RS01615 -5.8 -11.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18940 -5.8 -6.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11850 -5.8 -8.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11860 -5.8 -8.9 anthranilate synthase component I compare
BWI76_RS18950 -5.7 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05835 -5.7 -4.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS07065 -5.6 -7.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04250 -5.6 -9.1 homoserine kinase compare
BWI76_RS03010 -5.6 -8.5 ornithine carbamoyltransferase compare
BWI76_RS04670 -5.5 -11.7 3-isopropylmalate dehydratase large subunit compare
BWI76_RS23220 -5.4 -7.4 amino-acid N-acetyltransferase compare
BWI76_RS20965 -5.4 -6.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS22755 -5.4 -7.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23920 -5.3 -7.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS05015 -5.2 -4.1 transcriptional regulator compare
BWI76_RS11840 -5.2 -6.0 tryptophan synthase subunit alpha compare
BWI76_RS11965 -5.2 -4.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18925 -5.2 -8.6 histidinol dehydrogenase compare
BWI76_RS04240 -5.0 -2.2 thr operon leader peptide compare
BWI76_RS02995 -4.9 -8.9 aspartate carbamoyltransferase compare
BWI76_RS15115 -4.8 -4.7 MFS transporter compare
BWI76_RS09910 -4.8 -16.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS25115 -4.8 -7.1 argininosuccinate synthase compare
BWI76_RS04245 -4.8 -13.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00975 -4.7 -7.4 dihydroxy-acid dehydratase compare
BWI76_RS22765 -4.7 -15.4 sulfite reductase subunit alpha compare
BWI76_RS01610 -4.7 -6.0 phosphoribosylamine--glycine ligase compare
BWI76_RS10990 -4.5 -5.2 dihydroorotase compare
BWI76_RS04680 -4.5 -9.4 2-isopropylmalate synthase compare
BWI76_RS27385 -4.5 -7.6 orotate phosphoribosyltransferase compare
BWI76_RS25645 -4.5 -7.9 shikimate dehydrogenase compare
BWI76_RS00835 -4.5 -11.9 phosphoenolpyruvate carboxylase compare
BWI76_RS00400 -4.5 -3.1 glutamine synthetase compare
BWI76_RS00845 -4.5 -9.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22760 -4.4 -9.1 sulfite reductase subunit beta compare
BWI76_RS13920 -4.4 -6.4 magnesium-translocating P-type ATPase compare
BWI76_RS23265 -4.4 -4.3 hypothetical protein compare
BWI76_RS08385 -4.2 -3.5 citrate (Si)-synthase compare
BWI76_RS23240 -4.2 -2.9 exonuclease V subunit gamma compare
BWI76_RS02735 -4.2 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00180 -4.1 -2.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23360 -4.1 -4.7 diaminopimelate decarboxylase compare
BWI76_RS04510 -4.0 -3.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS04645 -3.8 -5.1 3-dehydroquinase compare
BWI76_RS25320 -3.8 -7.9 glutamate synthase compare
BWI76_RS26055 -3.6 -8.2 siroheme synthase compare
BWI76_RS21465 -3.6 -3.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS06765 -3.6 -5.1 transcriptional regulator compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS11845 -3.6 -2.1 tryptophan synthase subunit beta compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS02530 -3.5 -3.9 tRNA dimethylallyltransferase compare
BWI76_RS26570 -3.5 -4.2 anion permease compare
BWI76_RS09760 -3.5 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25315 -3.4 -11.1 glutamate synthase large subunit compare
BWI76_RS01800 -3.3 -6.4 glucose-6-phosphate isomerase compare
BWI76_RS00965 -3.3 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS23480 -3.3 -12.2 EAL domain-containing protein compare
BWI76_RS00985 -3.1 -6.3 transcriptional regulator IlvY compare
BWI76_RS05200 -3.0 -3.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS20435 -3.0 -2.3 chorismate synthase compare
BWI76_RS02410 -2.9 -2.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS00960 -2.8 -5.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00390 -2.7 -4.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS21370 -2.7 -3.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS15225 -2.7 -2.7 DeoR family transcriptional regulator compare
BWI76_RS01200 -2.6 -2.0 diaminopimelate epimerase compare
BWI76_RS13915 -2.5 -4.9 magnesium transport protein MgtC compare
BWI76_RS06525 -2.4 -7.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS25060 -2.4 -3.1 lipoprotein NlpI compare
BWI76_RS06530 -2.4 -5.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS00385 -2.2 -7.1 nitrogen assimilation regulatory protein compare
BWI76_RS20650 -2.2 -3.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS00345 -2.2 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS26000 -2.1 -7.1 aspartate aminotransferase family protein compare
BWI76_RS17975 -2.0 -4.4 tail-specific protease compare
BWI76_RS01210 -2.0 -2.0 tyrosine recombinase XerC compare
BWI76_RS27390 -2.0 -2.4 ribonuclease PH compare
BWI76_RS22690 -1.9 -1.6 adenylyl-sulfate kinase compare
BWI76_RS17720 -1.9 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21140 -1.8 -3.6 molecular chaperone HscA compare
BWI76_RS24025 -1.8 -5.0 agmatinase compare
BWI76_RS20970 -1.8 -2.0 phosphoribosylglycinamide formyltransferase compare
BWI76_RS27430 -1.8 -1.6 (p)ppGpp synthetase compare
BWI76_RS20440 -1.7 -1.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS15110 -1.6 -9.2 putative excinuclease ABC subunit A compare
BWI76_RS09655 -1.6 -3.3 leucine-responsive regulatory protein compare
BWI76_RS18715 -1.6 -7.2 hypothetical protein compare
BWI76_RS20900 -1.6 -1.9 outer membrane protein assembly factor BamC compare
BWI76_RS22805 -1.6 -8.1 GTP diphosphokinase compare
BWI76_RS25065 -1.6 -3.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS06770 -1.5 -7.3 Hha toxicity attenuator compare
BWI76_RS25335 -1.5 -3.6 stringent starvation protein A compare
BWI76_RS21690 -1.5 -2.7 hypothetical protein compare
BWI76_RS01275 -1.5 -7.0 LysR family transcriptional regulator compare
BWI76_RS02180 -1.4 -1.9 hypothetical protein compare
BWI76_RS24400 -1.4 -5.4 outer membrane channel protein TolC compare
BWI76_RS24900 -1.3 -1.5 DeoR family transcriptional regulator compare
BWI76_RS15840 -1.3 -2.1 prophage protein compare
BWI76_RS13595 -1.3 -2.9 transcriptional regulator compare
BWI76_RS04705 -1.3 -3.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS25285 -1.3 -1.5 HPr family phosphocarrier protein compare
BWI76_RS20640 -1.3 -3.9 cysteine synthase A compare
BWI76_RS15850 -1.3 -0.7 DUF1317 domain-containing protein compare
BWI76_RS14410 -1.3 -2.7 hypothetical protein compare
BWI76_RS25505 -1.2 -6.3 RNase E specificity factor CsrD compare
BWI76_RS08520 -1.2 -2.0 colicin transporter TolQ compare
BWI76_RS22235 -1.2 -2.3 transcriptional regulator GutM compare
BWI76_RS00970 -1.2 -1.6 branched chain amino acid aminotransferase compare
BWI76_RS09650 -1.2 -3.3 hypothetical protein compare
BWI76_RS18710 -1.2 -8.7 GGDEF-domain containing protein compare
BWI76_RS27165 -1.2 -2.5 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS05120 -1.2 -5.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS04305 -1.2 -1.1 molecular chaperone DnaJ compare
BWI76_RS26870 -1.2 -3.3 dipeptide ABC transporter ATP-binding protein compare
BWI76_RS01385 -1.2 -1.9 potassium transporter compare
BWI76_RS26620 -1.2 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS15835 -1.1 -0.8 hypothetical protein compare
BWI76_RS26775 -1.1 -3.0 endo-1,4-D-glucanase compare
BWI76_RS22700 -1.1 -5.4 sulfate adenylyltransferase subunit 2 compare
BWI76_RS20995 -1.1 -4.7 RNA degradosome polyphosphate kinase compare
BWI76_RS21480 -1.1 -2.8 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS00355 -1.1 -1.4 DNA polymerase I compare
BWI76_RS24100 -1.1 -4.0 YggS family pyridoxal phosphate enzyme compare
BWI76_RS20380 -1.1 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS26395 -1.1 -2.5 cell division protein FtsE compare
BWI76_RS16965 -1.0 -1.3 murein lipoprotein compare
BWI76_RS10950 -1.0 -2.6 MFS transporter compare
BWI76_RS24850 -1.0 -4.1 DeoR family transcriptional regulator compare
BWI76_RS26175 -1.0 -3.0 DeoR/GlpR family transcriptional regulator compare
BWI76_RS23485 -1.0 -4.9 hypothetical protein compare
BWI76_RS04570 -1.0 -4.3 RNA polymerase-associated protein RapA compare
BWI76_RS12375 -1.0 -3.3 DNA-invertase hin compare
BWI76_RS19025 -1.0 -6.5 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS22695 -1.0 -2.3 sulfate adenylyltransferase compare
BWI76_RS03665 -1.0 -1.7 ABC transporter ATP-binding protein compare
BWI76_RS01185 -1.0 -1.4 adenylate cyclase compare
BWI76_RS05895 -0.9 -3.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS16275 -0.9 -2.6 fumarate hydratase FumA compare
BWI76_RS25425 -0.9 -1.7 arginine repressor compare
BWI76_RS00600 -0.9 -3.3 LacI family transcriptional regulator compare
BWI76_RS08525 -0.9 -1.8 colicin transporter compare
BWI76_RS05465 -0.9 -1.3 amidohydrolase compare
BWI76_RS08665 -0.9 -4.4 6-phosphogluconolactonase compare
BWI76_RS09870 -0.9 -3.3 aromatic amino acid aminotransferase compare
BWI76_RS04530 -0.9 -1.8 peptidylprolyl isomerase SurA compare
BWI76_RS25280 -0.9 -1.8 RNase adaptor protein RapZ compare
BWI76_RS22095 -0.9 -1.4 multidrug export protein EmrA compare
BWI76_RS01350 -0.9 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS11130 -0.9 -3.3 PTS glucose transporter subunit IIBC compare
BWI76_RS12470 -0.9 -1.5 thiosulfate sulfurtransferase PspE compare
BWI76_RS19840 -0.9 -1.0 hypothetical protein compare
BWI76_RS15830 -0.8 -1.4 hypothetical protein compare
BWI76_RS03595 -0.8 -1.2 ethanolamine utilization protein EutM compare
BWI76_RS17565 -0.8 -1.6 hypothetical protein compare
BWI76_RS10040 -0.8 -1.6 heat-shock protein HspQ compare
BWI76_RS09025 -0.8 -2.2 GntR family transcriptional regulator compare
BWI76_RS21075 -0.8 -1.1 membrane protein compare
BWI76_RS00380 -0.8 -4.9 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS09470 -0.8 -2.7 putrescine ABC transporter permease compare
BWI76_RS15360 -0.8 -2.1 hypothetical protein compare
BWI76_RS11300 -0.8 -1.0 cupin compare
BWI76_RS10575 -0.8 -1.3 polar amino acid ABC transporter permease compare
BWI76_RS22125 -0.8 -1.5 membrane protein compare
BWI76_RS10535 -0.8 -2.4 Asp/Glu/hydantoin racemase compare
BWI76_RS19615 -0.8 -2.2 vancomycin high temperature exclusion protein compare
BWI76_RS19845 -0.8 -4.5 phosphatase compare
BWI76_RS19870 -0.8 -1.8 malate:quinone oxidoreductase compare
BWI76_RS06185 -0.8 -3.9 shikimate kinase II compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms