Experiment set8IT063 for Caulobacter crescentus NA1000

Compare to:

24 hours of 100ug/mL streptomycin treatment after 3 hour phosphate starvation in M5G

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03948 +1.0 3.2 hypothetical protein compare
CCNA_02250 +1.0 3.0 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_00147 +1.0 2.2 hypothetical protein compare
CCNA_03913 +1.0 1.6 hypothetical protein compare
CCNA_03954 +0.9 2.2 hypothetical protein compare
CCNA_01712 +0.8 6.4 CopY/TcrY family transcriptional repressor compare
CCNA_01790 +0.8 3.5 protein translocase subunit secG compare
CCNA_02249 +0.8 3.0 conserved hypothetical cytosolic protein compare
CCNA_02534 +0.8 1.6 hypothetical protein compare
CCNA_01270 +0.7 3.4 hypothetical protein compare
CCNA_02992 +0.7 3.7 hypothetical protein compare
CCNA_01979 +0.7 5.3 LexA repressor compare
CCNA_03961 +0.7 2.1 hypothetical protein compare
CCNA_01840 +0.7 5.8 MerR-family transcriptional regulator compare
CCNA_01756 +0.7 1.3 hypothetical protein compare
CCNA_03918 +0.7 1.4 hypothetical protein compare
CCNA_02589 +0.7 1.2 BolA-related transcriptional regulator compare
CCNA_02330 +0.7 3.2 hypothetical protein compare
CCNA_03635 +0.7 1.5 hypothetical protein compare
CCNA_02671 +0.7 2.1 hypothetical protein compare
CCNA_02063 +0.7 3.7 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01681 +0.7 4.1 RimI-like acetyltransferase compare
CCNA_03643 +0.6 1.1 succinate dehydrogenase membrane anchor subunit compare
CCNA_01531 +0.6 5.3 acetyltransferase compare
CCNA_01501 +0.6 2.1 protein kinase C-like superfamily protein compare
CCNA_01393 +0.6 5.7 soluble lytic murein transglycosylase compare
CCNA_R0037 +0.6 2.7 tRNA-Glu compare
CCNA_00429 +0.6 2.6 hypothetical protein compare
CCNA_03951 +0.6 3.6 hypothetical protein compare
CCNA_01573 +0.6 3.5 ArsR-family transcriptional regulator compare
CCNA_02760 +0.6 2.0 hypothetical protein compare
CCNA_03555 +0.6 4.9 esterase lipase family protein compare
CCNA_00998 +0.6 3.7 ROS/MUCR transcriptional regulator compare
CCNA_01679 +0.6 4.8 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01684 +0.6 3.7 phenylalanine-4-hydroxylase compare
CCNA_03975 +0.6 3.1 hypothetical protein compare
CCNA_01913 +0.6 4.5 MarR-family transcriptional regulator compare
CCNA_01339 +0.6 3.4 ArsR-family transcriptional regulator compare
CCNA_01931 +0.6 3.9 TetR-family transcriptional regulator compare
CCNA_00693 +0.6 2.2 heat shock protein 15 compare
CCNA_01752 +0.6 4.1 YicC-family protein compare
CCNA_01578 +0.6 3.2 beta-lactamase repressor compare
CCNA_02004 +0.6 1.7 SOS-induced inhibitor of cell division SidA compare
CCNA_02732 +0.6 4.2 hypothetical protein compare
CCNA_00521 +0.5 1.3 antitoxin protein compare
CCNA_02040 +0.5 1.5 phosphoserine phosphatase compare
CCNA_01541 +0.5 4.0 LysR-family transcriptional regulator compare
CCNA_01765 +0.5 3.4 peptidase inhibitor, I78 family compare
CCNA_01526 +0.5 2.6 flagellar biosynthesis regulatory protein flaF compare
CCNA_03992 +0.5 0.7 UDP-glucose 6-dehydrogenase-related protein compare
CCNA_01006 +0.5 3.0 flagellar hook-basal body complex protein FliE compare
CCNA_01680 +0.5 4.2 succinylarginine dihydrolase compare
CCNA_01849 +0.5 3.0 quinol cytochrome oxidase polypeptide III compare
CCNA_01823 +0.5 2.2 hypothetical protein compare
CCNA_01801 +0.5 2.2 hypothetical protein compare
CCNA_03280 +0.5 4.9 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02957 +0.5 3.3 ArsR-family transcriptional regulator compare
CCNA_01414 +0.5 3.9 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01851 +0.5 4.6 quinol cytochrome oxidase polypeptide II compare
CCNA_01949 +0.5 2.1 bactofilin A BacA compare
CCNA_01528 +0.5 3.7 flagellin fljK compare
CCNA_02000 +0.5 0.8 SSU ribosomal protein S2P compare
CCNA_01412 +0.5 3.8 acyl-CoA dehydrogenase, short-chain specific compare
CCNA_02341 +0.5 2.4 small heat shock protein compare
CCNA_02103 +0.5 2.9 hypothetical protein compare
CCNA_01420 +0.5 2.4 NrdR family transcriptional regulator compare
CCNA_01655 +0.5 2.9 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02011 +0.5 3.0 methylmalonyl CoA epimerase compare
CCNA_01742 +0.5 2.4 hypothetical protein compare
CCNA_01008 +0.5 4.4 urocanate hydratase compare
CCNA_02324 +0.5 4.0 heat shock protein 33 hsp33 compare
CCNA_01413 +0.5 3.5 phosphoglycerate mutase family protein compare
CCNA_00919 +0.5 3.3 hypothetical protein compare
CCNA_02942 +0.5 2.5 nucleoside-diphosphate-sugar epimerase compare
CCNA_01968 +0.5 1.4 pentapeptide repeats containing protein compare
CCNA_02309 +0.5 2.1 EF hand domain protein compare
CCNA_01405 +0.5 2.4 GIY-YIG domain protein compare
CCNA_02132 +0.5 2.2 LacI-family transcriptional regulator compare
CCNA_02878 +0.5 1.0 hypothetical protein compare
CCNA_01923 +0.5 3.8 ATP-dependent RNA helicase compare
CCNA_01850 +0.5 4.0 quinol cytochrome oxidase polypeptide I compare
CCNA_01278 +0.5 3.3 hypothetical protein compare
CCNA_03936 +0.5 1.8 hypothetical protein compare
CCNA_01619 +0.5 3.0 NYN domain protein compare
CCNA_03893 +0.5 1.3 hypothetical protein compare
CCNA_03929 +0.5 1.6 hypothetical protein compare
CCNA_01367 +0.5 3.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
CCNA_03400 +0.5 1.6 hypothetical protein compare
CCNA_01527 +0.5 3.8 flagellin fljL compare
CCNA_02591 +0.5 2.5 glutaredoxin compare
CCNA_00142 +0.5 2.9 endonuclease compare
CCNA_03129 +0.5 4.1 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01827 +0.5 2.8 cobyric acid synthase CobQ compare
CCNA_01094 +0.5 1.9 hypothetical protein compare
CCNA_00347 +0.5 2.9 hypothetical protein compare
CCNA_R0047 +0.5 1.8 tRNA-Val compare
CCNA_01954 +0.5 2.3 ribonuclease E compare
CCNA_03252 +0.5 3.5 CopY/TcrY-family transcriptional regulator compare
CCNA_03479 +0.4 3.1 MarR-family transcriptional regulator compare
CCNA_00360 +0.4 3.1 alpha/beta hydrolase superfamily protein compare
CCNA_01780 +0.4 3.5 exopolyphosphatase compare
CCNA_01768 +0.4 1.9 hypothetical protein compare
CCNA_03287 +0.4 3.2 PadR-family transcriptional regulator compare
CCNA_01186 +0.4 2.1 hypothetical protein compare
CCNA_01415 +0.4 3.6 methyltransferase compare
CCNA_01773 +0.4 2.5 SNARE-associated family membrane protein compare
CCNA_00047 +0.4 3.4 tRNA m7-G46 methyltransferase compare
CCNA_00684 +0.4 2.5 anti-sigma factor, ChrR-family compare
CCNA_02010 +0.4 0.6 hypothetical protein compare
CCNA_01406 +0.4 3.2 metal-dependent hydrolase compare
CCNA_02728 +0.4 3.1 hypothetical protein compare
CCNA_00067 +0.4 2.8 YciI-like protein compare
CCNA_03964 +0.4 1.8 hypothetical protein compare
CCNA_01035 +0.4 3.5 gamma-glutamyltranspeptidase compare
CCNA_02644 +0.4 1.0 cell division protein FtsL compare
CCNA_02805 +0.4 2.2 hypothetical protein compare
CCNA_01813 +0.4 2.9 tRNA-dihydrouridine synthase compare
CCNA_01926 +0.4 3.0 GGDEF diguanylate cyclase DgcB compare
CCNA_01009 +0.4 3.0 N-formylglutamate deformylase compare
CCNA_03064 +0.4 2.2 PadR-family transcriptional regulator compare
CCNA_03952 +0.4 3.1 hypothetical protein compare
CCNA_01933 +0.4 1.8 hypothetical protein compare
CCNA_02703 +0.4 2.7 5-hydroxyisourate hydrolase compare
CCNA_03034 +0.4 1.9 hypothetical protein compare
CCNA_00769 +0.4 3.2 TetR family transcriptional regulator compare
CCNA_03989 +0.4 3.6 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00954 +0.4 3.3 AAA-family response regulator flbD compare
CCNA_01678 +0.4 2.9 arginine N-succinyltransferase, beta chain compare
CCNA_01963 +0.4 2.2 hypothetical protein compare
CCNA_02339 +0.4 3.5 methyltransferase compare
CCNA_01007 +0.4 2.2 hypothetical protein compare
CCNA_03963 +0.4 1.4 hypothetical protein compare
CCNA_01956 +0.4 3.2 outer membrane protein compare
CCNA_01533 +0.4 2.8 hypothetical protein compare
CCNA_02841 +0.4 1.9 hypothetical protein compare
CCNA_01939 +0.4 1.5 ADP-ribosylglycohydrolase compare
CCNA_02221 +0.4 3.5 methionine synthase I metH compare
CCNA_02551 +0.4 1.8 hypothetical protein compare
CCNA_01848 +0.4 3.0 quinol cytochrome oxidase polypeptide IV compare
CCNA_01235 +0.4 2.9 AcrR-family transcriptional regulator compare
CCNA_00946 +0.4 2.9 Basal-body rod modification protein FlgD compare
CCNA_01252 +0.4 3.8 soluble lytic murein transglycosylase compare
CCNA_00889 +0.4 2.2 lumazine-binding domain protein compare
CCNA_01338 +0.4 2.5 glyoxalase family protein compare
CCNA_02338 +0.4 2.9 hypothetical protein compare
CCNA_03515 +0.4 2.4 hypothetical protein compare
CCNA_01004 +0.4 1.5 flagellar basal-body rod protein FlgB compare
CCNA_01385 +0.4 2.7 rRNA methylase compare
CCNA_01445 +0.4 2.2 hypothetical protein compare
CCNA_02273 +0.4 2.9 glutathione peroxidase compare
CCNA_02475 +0.4 2.8 transcriptional regulator vanR compare
CCNA_01530 +0.4 3.1 flagellin FljJ compare
CCNA_01623 +0.4 2.7 phosphohydrolase, MutT/nudix family compare
CCNA_01024 +0.4 3.0 hypothetical protein compare
CCNA_02696 +0.4 3.1 AtzE family amidohydrolase compare
CCNA_00542 +0.4 2.2 hypothetical protein compare
CCNA_02367 +0.4 3.2 CelR-family transcriptional regulator compare
CCNA_01333 +0.4 1.9 hypothetical protein compare
CCNA_00368 +0.4 2.8 phosphonates transport system permease protein phnE compare
CCNA_03518 +0.4 3.2 cytochrome c oxidase polypeptide II coxB compare
CCNA_02042 +0.4 2.5 trigger factor chaperone compare
CCNA_01536 +0.4 1.8 hypothetical protein compare
CCNA_01075 +0.4 2.3 beta/gamma crystallin family protein compare
CCNA_01820 +0.4 2.8 GTP-binding protein hflX compare
CCNA_03966 +0.4 2.4 hypothetical protein compare
CCNA_01727 +0.4 2.8 methyl-accepting chemotaxis protein compare
CCNA_02608 +0.4 2.7 hypothetical protein compare
CCNA_01748 +0.4 2.9 methyltransferase compare
CCNA_00053 +0.4 2.9 phosphate starvation-inducible protein PhoH compare
CCNA_00114 +0.4 2.0 MarR/EmrR-family transcriptional regulator compare
CCNA_00913 +0.4 2.2 hypothetical protein compare
CCNA_02997 +0.4 2.1 cold shock protein CspA compare
CCNA_03123 +0.4 2.7 ArsR-family transcriptional regulator compare
CCNA_00319 +0.4 2.3 acetyltransferase, GNAT family compare
CCNA_00527 +0.4 2.5 hypothetical protein compare
CCNA_02698 +0.4 2.8 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_02619 +0.4 3.2 stomatin/prohibitin-related protein compare
CCNA_02351 +0.4 2.5 uracil phosphoribosyltransferase compare
CCNA_01677 +0.4 1.9 carboxypeptidase G2 precursor compare
CCNA_00369 +0.4 3.2 magnesium and cobalt efflux protein corC-like protein compare
CCNA_01694 +0.4 2.6 CocE/NonD family hydrolase compare
CCNA_03039 +0.4 2.5 pilus assembly protein CpaD compare
CCNA_01804 +0.4 2.0 glutathione peroxidase compare
CCNA_02729 +0.4 3.2 oligopeptide transporter compare
CCNA_00765 +0.4 2.1 hypothetical protein compare
CCNA_00804 +0.4 2.5 ASC-1 homology domain protein compare
CCNA_01973 +0.4 2.0 hypothetical protein compare
CCNA_03081 +0.4 1.6 hypothetical protein compare
CCNA_01539 +0.4 2.3 pirin family protein compare
CCNA_03762 +0.4 1.5 acetolactate synthase-related protein compare
CCNA_00750 +0.4 3.0 FeaR-family transcriptional regulator compare
CCNA_02952 +0.4 1.0 hypothetical protein compare
CCNA_01716 +0.4 0.3 hypothetical protein compare
CCNA_03684 +0.4 2.6 carbonic anhydrase compare
CCNA_01013 +0.4 2.1 histidine utilization repressor compare
CCNA_02009 +0.4 1.7 hypothetical protein compare
CCNA_02617 +0.4 2.8 histidinol-phosphate aminotransferase compare
CCNA_01276 +0.4 1.6 cytochrome c5 compare
CCNA_02348 +0.3 1.9 acetyltransferase, GNAT family compare
CCNA_00811 +0.3 2.2 TetR-family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Streptomycin sulfate salt across organisms