Experiment set8IT059 for Klebsiella michiganensis M5al

Compare to:

Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS02800 +1.1 3.8 ABC transporter compare
BWI76_RS14390 +1.0 2.6 hypothetical protein compare
BWI76_RS00375 +1.0 2.2 hypothetical protein compare
BWI76_RS04715 +0.9 1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS20150 +0.9 1.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS18605 +0.9 1.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS18335 +0.9 5.2 DNA-binding response regulator compare
BWI76_RS03920 +0.9 3.2 N-acetyltransferase compare
BWI76_RS15195 +0.9 2.7 DUF4186 domain-containing protein compare
BWI76_RS02855 +0.8 1.2 cytochrome B562 compare
BWI76_RS20050 +0.8 1.9 hypothetical protein compare
BWI76_RS21460 +0.8 2.0 translation inhibitor protein RaiA compare
BWI76_RS01775 +0.8 1.3 hypothetical protein compare
BWI76_RS10400 +0.8 2.2 hypothetical protein compare
BWI76_RS22960 +0.8 1.6 YgdI/YgdR family lipoprotein compare
BWI76_RS00415 +0.8 2.7 glucose-1-phosphatase compare
BWI76_RS12420 +0.7 1.4 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS21310 +0.7 1.1 DNA repair protein RecO compare
BWI76_RS11015 +0.7 1.8 hypothetical protein compare
BWI76_RS27875 +0.7 0.6 membrane protein compare
BWI76_RS20170 +0.7 2.2 NADH-quinone oxidoreductase subunit F compare
BWI76_RS06325 +0.7 1.5 hypothetical protein compare
BWI76_RS17400 +0.7 1.5 transporter compare
BWI76_RS21130 +0.7 2.0 Fe-S assembly protein IscX compare
BWI76_RS15660 +0.7 1.1 hypothetical protein compare
BWI76_RS18175 +0.7 1.9 hydrolase compare
BWI76_RS12185 +0.7 1.4 hypothetical protein compare
BWI76_RS20720 +0.7 1.4 hypothetical protein compare
BWI76_RS15975 +0.7 1.2 hypothetical protein compare
BWI76_RS09505 +0.7 1.8 arginine transporter permease subunit ArtM compare
BWI76_RS15760 +0.7 1.6 hypothetical protein compare
BWI76_RS15685 +0.7 2.0 hypothetical protein compare
BWI76_RS23690 +0.7 1.8 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS15285 +0.7 2.6 stress protection protein MarC compare
BWI76_RS23670 +0.7 3.6 alkaline phosphatase compare
BWI76_RS18425 +0.7 2.9 phosphohydrolase compare
BWI76_RS25000 +0.6 1.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS09560 +0.6 1.1 DoxX family membrane protein compare
BWI76_RS14415 +0.6 1.5 transcriptional regulator, TetR family protein compare
BWI76_RS16805 +0.6 1.7 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS16935 +0.6 1.2 shikimate dehydrogenase compare
BWI76_RS05335 +0.6 2.7 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS18385 +0.6 1.1 hypothetical protein compare
BWI76_RS05045 +0.6 1.3 general secretion pathway protein GspM compare
BWI76_RS27850 +0.6 2.9 DNA-binding transcriptional regulator DsdC compare
BWI76_RS00450 +0.6 2.1 formate dehydrogenase accessory protein FdhE compare
BWI76_RS03095 +0.6 1.5 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) compare
BWI76_RS16510 +0.6 2.2 transcriptional repressor PurR compare
BWI76_RS06130 +0.6 2.2 extensin family protein compare
BWI76_RS12205 +0.6 2.2 hypothetical protein compare
BWI76_RS23015 +0.6 1.3 cobalt transporter ATP-binding subunit compare
BWI76_RS06045 +0.6 3.5 hypothetical protein compare
BWI76_RS18885 +0.6 1.3 nitrogen fixation regulatory protein compare
BWI76_RS26185 +0.6 1.0 thiosulfate sulfurtransferase compare
BWI76_RS13895 +0.6 2.6 LysR family transcriptional regulator compare
BWI76_RS13250 +0.6 1.1 cytochrome b561 compare
BWI76_RS01095 +0.6 2.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS09830 +0.6 1.7 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS24295 +0.6 1.7 AraC family transcriptional regulator compare
BWI76_RS23735 +0.6 2.6 sugar diacid utilization regulator compare
BWI76_RS14145 +0.6 2.8 dihydrolipoyl dehydrogenase compare
BWI76_RS08980 +0.6 1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS10910 +0.6 1.9 hypothetical protein compare
BWI76_RS11605 +0.6 2.4 DNA topoisomerase III compare
BWI76_RS16990 +0.6 3.0 ABC transporter ATP-binding protein compare
BWI76_RS05810 +0.6 1.1 hypothetical protein compare
BWI76_RS12670 +0.6 1.8 DNA polymerase V subunit UmuD compare
BWI76_RS08380 +0.6 1.2 endonuclease VIII compare
BWI76_RS14460 +0.6 1.8 MurR/RpiR family transcriptional regulator compare
BWI76_RS08215 +0.6 2.4 glucosamine-6-phosphate deaminase compare
BWI76_RS23155 +0.6 1.4 microcompartment protein PduM compare
BWI76_RS17920 +0.6 2.2 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS23125 +0.6 1.6 propanediol dehydratase small subunit compare
BWI76_RS19325 +0.6 1.3 mandelate racemase compare
BWI76_RS15980 +0.6 1.6 lysine transporter LysE compare
BWI76_RS20155 +0.6 1.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26405 +0.6 1.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS14015 +0.5 1.3 L-2,4-diaminobutyrate decarboxylase compare
BWI76_RS21890 +0.5 1.6 oxidoreductase compare
BWI76_RS07165 +0.5 0.8 hypothetical protein compare
BWI76_RS05135 +0.5 2.4 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS19520 +0.5 3.3 acetyltransferase GCN5 compare
BWI76_RS21090 +0.5 1.6 cytoskeletal protein RodZ compare
BWI76_RS02200 +0.5 2.1 phosphonate C-P lyase system protein PhnL compare
BWI76_RS04815 +0.5 1.6 cell division protein ZapD compare
BWI76_RS03080 +0.5 1.7 (Fe-S)-cluster assembly protein compare
BWI76_RS04975 +0.5 2.4 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS18455 +0.5 1.1 tRNA-Ser compare
BWI76_RS01235 +0.5 1.8 hypothetical protein compare
BWI76_RS12605 +0.5 1.6 hypothetical protein compare
BWI76_RS04655 +0.5 1.2 shikimate dehydrogenase compare
BWI76_RS04980 +0.5 1.9 hypothetical protein compare
BWI76_RS01725 +0.5 2.7 PTS mannose/fructose/sorbose family transporter subunit IID compare
BWI76_RS04145 +0.5 1.2 purine-nucleoside phosphorylase compare
BWI76_RS06175 +0.5 1.6 DUF188 domain-containing protein compare
BWI76_RS13125 +0.5 1.8 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS12465 +0.5 0.9 phage shock protein D compare
BWI76_RS09330 +0.5 2.1 baseplate assembly protein V compare
BWI76_RS11190 +0.5 1.3 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS01585 +0.5 2.3 transcriptional regulator compare
BWI76_RS00425 +0.5 1.8 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS13245 +0.5 1.8 DNA-damage-inducible protein I compare
BWI76_RS10740 +0.5 2.2 NAD(P)H:quinone oxidoreductase compare
BWI76_RS13890 +0.5 1.2 LysR family transcriptional regulator compare
BWI76_RS08495 +0.5 2.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS20795 +0.5 0.9 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS13040 +0.5 2.1 transcriptional regulator compare
BWI76_RS11435 +0.5 0.8 hypothetical protein compare
BWI76_RS15920 +0.5 1.1 hypothetical protein compare
BWI76_RS16575 +0.5 2.3 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS08275 +0.5 1.0 LexA regulated protein compare
BWI76_RS10055 +0.5 2.0 AraC family transcriptional regulator compare
BWI76_RS18090 +0.5 1.5 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS13420 +0.5 1.2 ABC transporter permease compare
BWI76_RS26065 +0.5 1.6 phosphoglycolate phosphatase compare
BWI76_RS00715 +0.5 1.1 two-component sensor histidine kinase compare
BWI76_RS20165 +0.5 2.6 NADH-quinone oxidoreductase subunit G compare
BWI76_RS22815 +0.5 3.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS22100 +0.5 2.1 multidrug effux MFS transporter subunit EmrB compare
BWI76_RS24270 +0.5 1.1 membrane protein compare
BWI76_RS25220 +0.5 1.4 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS19860 +0.5 1.5 hypothetical protein compare
BWI76_RS03015 +0.5 2.0 RNase E inhibitor protein compare
BWI76_RS24035 +0.5 1.7 hypothetical protein compare
BWI76_RS05235 +0.5 0.8 hypothetical protein compare
BWI76_RS20160 +0.5 1.8 NADH-quinone oxidoreductase subunit H compare
BWI76_RS25270 +0.5 1.7 ribosome hibernation promoting factor compare
BWI76_RS11060 +0.5 1.1 septum formation inhibitor Maf compare
BWI76_RS24575 +0.5 0.5 hypothetical protein compare
BWI76_RS16640 +0.5 2.1 threonine transporter compare
BWI76_RS21780 +0.5 1.3 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS06290 +0.5 1.3 ACP phosphodiesterase compare
BWI76_RS18080 +0.5 2.3 protein YebE compare
BWI76_RS08780 +0.5 1.9 ABC transporter compare
BWI76_RS20940 +0.5 0.7 uracil/xanthine transporter compare
BWI76_RS26830 +0.4 2.0 endoglucanase compare
BWI76_RS21445 +0.4 1.7 hypothetical protein compare
BWI76_RS14160 +0.4 2.7 ABC transporter substrate-binding protein compare
BWI76_RS02820 +0.4 2.2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS24945 +0.4 0.7 glutamine amidotransferase compare
BWI76_RS27555 +0.4 2.1 putative sugar kinase/transcriptional regulator, ATPase domain protein compare
BWI76_RS02255 +0.4 2.0 chaperone-modulator protein CbpM compare
BWI76_RS14770 +0.4 1.0 PTS IIA 2 domain protein compare
BWI76_RS13955 +0.4 1.6 hypothetical protein compare
BWI76_RS13775 +0.4 1.7 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS18780 +0.4 1.6 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS11520 +0.4 0.8 hypothetical protein compare
BWI76_RS26500 +0.4 2.1 nickel ABC transporter, nickel/metallophore periplasmic binding protein compare
BWI76_RS04010 +0.4 1.5 hypothetical protein compare
BWI76_RS20145 +0.4 0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS12825 +0.4 1.3 hypothetical protein compare
BWI76_RS24875 +0.4 2.9 tagatose-1,6-bisphosphate aldolase compare
BWI76_RS24500 +0.4 1.6 urease subunit gamma compare
BWI76_RS23305 +0.4 0.9 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS13710 +0.4 1.2 benzoate 1,2-dioxygenase small subunit compare
BWI76_RS26285 +0.4 1.6 glycerophosphodiester phosphodiesterase compare
BWI76_RS24235 +0.4 1.8 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) compare
BWI76_RS27645 +0.4 1.3 ADP-ribose pyrophosphatase compare
BWI76_RS15950 +0.4 0.9 dethiobiotin synthase compare
BWI76_RS01165 +0.4 2.3 protoheme IX biogenesis protein HemY compare
BWI76_RS02180 +0.4 0.7 hypothetical protein compare
BWI76_RS21495 +0.4 1.8 outer membrane lipoprotein compare
BWI76_RS16315 +0.4 0.8 SirA-like protein compare
BWI76_RS24485 +0.4 1.0 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS09320 +0.4 2.1 P2 phage tail completion protein R compare
BWI76_RS15925 +0.4 1.1 dimethyl sulfoxide reductase subunit A compare
BWI76_RS11135 +0.4 1.7 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS01590 +0.4 1.9 hypothetical protein compare
BWI76_RS16050 +0.4 2.7 malonate decarboxylase holo-ACP synthase compare
BWI76_RS02560 +0.4 1.7 membrane protein compare
BWI76_RS08750 +0.4 0.7 kinase inhibitor compare
BWI76_RS15235 +0.4 0.8 hypothetical protein compare
BWI76_RS20245 +0.4 2.2 transketolase subunit B compare
BWI76_RS21740 +0.4 1.4 transcriptional regulator, LysR family protein compare
BWI76_RS26355 +0.4 1.8 hypothetical protein compare
BWI76_RS09935 +0.4 1.8 paraquat-inducible membrane protein A compare
BWI76_RS18770 +0.4 0.7 DNA gyrase inhibitor compare
BWI76_RS15450 +0.4 2.0 hypothetical protein compare
BWI76_RS16420 +0.4 2.1 anhydro-N-acetylmuramic acid kinase compare
BWI76_RS13195 +0.4 1.8 glutamate dehydrogenase compare
BWI76_RS22850 +0.4 1.2 tRNA pseudouridine synthase TruC compare
BWI76_RS20250 +0.4 1.2 hypothetical protein compare
BWI76_RS15095 +0.4 2.1 isochorismatase compare
BWI76_RS23570 +0.4 2.6 fimbrial protein compare
BWI76_RS23580 +0.4 0.9 hypothetical protein compare
BWI76_RS09730 +0.4 0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS19320 +0.4 2.0 putative ABC transport system periplasmic binding protein compare
BWI76_RS06560 +0.4 1.0 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS09975 +0.4 1.3 cell division inhibitor SulA compare
BWI76_RS25485 +0.4 0.7 septum formation protein Maf compare
BWI76_RS22205 +0.4 1.1 cation ABC transporter ATP-binding protein compare
BWI76_RS18355 +0.4 2.2 amino acid ABC transporter permease compare
BWI76_RS07595 +0.4 1.4 putative oxidoreductase compare
BWI76_RS16215 +0.4 1.6 hypothetical protein compare
BWI76_RS26780 +0.4 2.2 cellulose synthase regulator BcsB compare
BWI76_RS14105 +0.4 1.8 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS15745 +0.4 1.2 hypothetical protein compare
BWI76_RS04895 +0.4 1.4 hypothetical protein compare
BWI76_RS12050 +0.4 1.2 hypothetical protein compare
BWI76_RS10070 +0.4 1.0 BAX inhibitor protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Glucose in Klebsiella michiganensis M5al

For carbon source D-Glucose across organisms