Experiment set8IT054 for Klebsiella michiganensis M5al

Compare to:

D-Glucose 20 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS09640 +1.1 5.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS08500 +0.9 3.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS06540 +0.9 2.9 DNA-binding protein HU-beta compare
BWI76_RS01585 +0.8 3.9 transcriptional regulator compare
BWI76_RS16805 +0.7 2.2 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS11110 +0.7 3.0 cell division protein YceG compare
BWI76_RS05075 +0.7 1.1 type II secretion system protein GspG compare
BWI76_RS18770 +0.7 1.4 DNA gyrase inhibitor compare
BWI76_RS00025 +0.7 0.9 hypothetical protein compare
BWI76_RS06680 +0.7 1.0 hypothetical protein compare
BWI76_RS13545 +0.7 1.7 N-acetyltransferase compare
BWI76_RS05445 +0.7 3.4 type 11 methyltransferase compare
BWI76_RS22940 +0.7 4.1 DNA-binding transcriptional activator FucR compare
BWI76_RS18360 +0.7 1.8 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS10650 +0.7 2.4 PTS fructose-like transporter subunit EIIB compare
BWI76_RS17805 +0.7 1.3 membrane protein compare
BWI76_RS15980 +0.6 2.1 lysine transporter LysE compare
BWI76_RS08585 +0.6 1.9 nicotinamide riboside transporter PnuC compare
BWI76_RS13245 +0.6 0.9 DNA-damage-inducible protein I compare
BWI76_RS14940 +0.6 1.6 hypothetical protein compare
BWI76_RS10745 +0.6 1.1 hypothetical protein compare
BWI76_RS14740 +0.6 3.1 LysR family transcriptional regulator compare
BWI76_RS13970 +0.6 1.9 ABC transporter compare
BWI76_RS08380 +0.6 0.9 endonuclease VIII compare
BWI76_RS23030 +0.6 1.9 cobalamin biosynthesis protein CbiM compare
BWI76_RS01620 +0.6 3.4 hypothetical protein compare
BWI76_RS18335 +0.6 4.3 DNA-binding response regulator compare
BWI76_RS04840 +0.6 2.3 prepilin peptidase-dependent pilin compare
BWI76_RS00865 +0.6 2.5 DNA-binding transcriptional regulator OxyR compare
BWI76_RS08975 +0.6 2.2 amino acid ABC transporter substrate-binding protein compare
BWI76_RS27425 +0.6 1.6 DNA-directed RNA polymerase subunit omega compare
BWI76_RS12070 +0.6 1.1 hypothetical protein compare
BWI76_RS20090 +0.6 2.6 ribonuclease Z compare
BWI76_RS12485 +0.6 2.1 TyrR family transcriptional regulator compare
BWI76_RS22815 +0.6 4.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS11915 +0.6 2.4 protease SohB compare
BWI76_RS20145 +0.6 1.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS18915 +0.6 2.0 NAD(P)-dependent oxidoreductase compare
BWI76_RS00715 +0.6 2.0 two-component sensor histidine kinase compare
BWI76_RS15940 +0.6 2.2 DMSO reductase maturation protein DsmD compare
BWI76_RS08495 +0.6 3.8 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS16795 +0.6 1.3 amino acid ABC transporter ATPase compare
BWI76_RS06520 +0.6 3.5 trigger factor compare
BWI76_RS18055 +0.6 2.7 copper resistance protein D compare
BWI76_RS00060 +0.6 1.8 N-acetylneuraminate lyase compare
BWI76_RS25915 +0.6 2.7 protein SlyX compare
BWI76_RS18060 +0.6 3.1 hypothetical protein compare
BWI76_RS27050 +0.6 3.1 hypothetical protein compare
BWI76_RS06190 +0.5 2.4 hypothetical protein compare
BWI76_RS09635 +0.5 1.3 amino acid ABC transporter ATP-binding protein compare
BWI76_RS14145 +0.5 1.8 dihydrolipoyl dehydrogenase compare
BWI76_RS23340 +0.5 1.0 transcriptional regulator compare
BWI76_RS06475 +0.5 1.0 protoheme IX farnesyltransferase compare
BWI76_RS03175 +0.5 2.4 hypothetical protein compare
BWI76_RS22090 +0.5 1.5 transcriptional regulator compare
BWI76_RS17765 +0.5 1.4 hypothetical protein compare
BWI76_RS17325 +0.5 2.4 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS01005 +0.5 1.8 CarD family transcriptional regulator compare
BWI76_RS09315 +0.5 0.9 hypothetical protein compare
BWI76_RS04605 +0.5 1.1 thiamine ABC transporter ATP-binding protein compare
BWI76_RS24500 +0.5 1.3 urease subunit gamma compare
BWI76_RS23455 +0.5 1.5 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS11920 +0.5 1.4 hypothetical protein compare
BWI76_RS14040 +0.5 1.9 thiaminase compare
BWI76_RS18815 +0.5 1.9 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS24630 +0.5 1.9 putrescine aminotransferase compare
BWI76_RS16455 +0.5 1.3 superoxide dismutase compare
BWI76_RS03825 +0.5 2.0 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS09560 +0.5 1.2 DoxX family membrane protein compare
BWI76_RS16030 +0.5 1.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS20750 +0.5 0.8 carboxysome structural protein EutK compare
BWI76_RS00810 +0.5 2.4 DeoR family transcriptional regulator compare
BWI76_RS17420 +0.5 2.4 hypothetical protein compare
BWI76_RS12550 +0.5 1.1 hypothetical protein compare
BWI76_RS10755 +0.5 1.1 pyrimidine utilization flavin reductase protein F compare
BWI76_RS22300 +0.5 1.4 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS21570 +0.5 1.3 RnfH family protein compare
BWI76_RS10500 +0.5 1.4 flavoprotein monooxygenase compare
BWI76_RS14845 +0.5 2.6 hypothetical protein compare
BWI76_RS17390 +0.5 1.0 DsrE family protein compare
BWI76_RS21895 +0.5 2.3 amino acid ABC transport system periplasmic amino acid-binding component compare
BWI76_RS14915 +0.5 1.3 hypothetical protein compare
BWI76_RS08910 +0.5 2.4 transketolase domain-containing protein compare
BWI76_RS00430 +0.5 2.1 GNAT family N-acetyltransferase compare
BWI76_RS05235 +0.5 0.9 hypothetical protein compare
BWI76_RS27395 +0.5 2.3 hypothetical protein compare
BWI76_RS06910 +0.5 1.1 transcriptional regulator compare
BWI76_RS11675 +0.5 1.1 arginine N-succinyltransferase compare
BWI76_RS24745 +0.5 2.2 membrane protein compare
BWI76_RS17550 +0.5 1.5 oxidoreductase (Fe-S)-binding subunit compare
BWI76_RS04450 +0.5 2.2 citrate lyase subunit alpha compare
BWI76_RS25700 +0.5 2.6 heavy metal-responsive transcriptional regulator compare
BWI76_RS22880 +0.5 1.9 L-serine ammonia-lyase compare
BWI76_RS21485 +0.5 3.6 DUF4154 domain-containing protein compare
BWI76_RS01905 +0.5 1.0 envelope stress response protein PspG compare
BWI76_RS19530 +0.5 3.0 YIP1 family protein compare
BWI76_RS05060 +0.5 1.6 type II secretion system protein GspJ compare
BWI76_RS11665 +0.5 1.7 exodeoxyribonuclease III compare
BWI76_RS02885 +0.5 2.0 dihydroorotase compare
BWI76_RS11435 +0.5 1.3 hypothetical protein compare
BWI76_RS14935 +0.5 0.9 NIPSNAP family containing protein compare
BWI76_RS24295 +0.5 2.4 AraC family transcriptional regulator compare
BWI76_RS26065 +0.4 1.9 phosphoglycolate phosphatase compare
BWI76_RS03170 +0.4 2.0 hypothetical protein compare
BWI76_RS18425 +0.4 1.3 phosphohydrolase compare
BWI76_RS10060 +0.4 1.0 acylphosphatase compare
BWI76_RS23970 +0.4 0.7 mechanosensitive ion channel protein MscS compare
BWI76_RS12715 +0.4 2.0 universal stress protein F compare
BWI76_RS02900 +0.4 2.8 6-phosphogluconolactonase compare
BWI76_RS22215 +0.4 1.4 PTS sorbitol transporter subunit IIC compare
BWI76_RS08310 +0.4 1.5 potassium-transporting ATPase subunit C compare
BWI76_RS05880 +0.4 1.2 AraC-type DNA-binding domain-containing protein compare
BWI76_RS23505 +0.4 3.8 ferrous iron transporter B compare
BWI76_RS13195 +0.4 1.3 glutamate dehydrogenase compare
BWI76_RS14780 +0.4 1.8 phosphotriesterase compare
BWI76_RS13250 +0.4 0.8 cytochrome b561 compare
BWI76_RS23470 +0.4 3.6 hypothetical protein compare
BWI76_RS19750 +0.4 0.9 elongation factor P-like protein YeiP compare
BWI76_RS09145 +0.4 1.7 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS18430 +0.4 2.2 hypothetical protein compare
BWI76_RS18420 +0.4 2.1 DNA (cytosine-5-)-methyltransferase compare
BWI76_RS19755 +0.4 1.3 fructuronate reductase compare
BWI76_RS13525 +0.4 1.4 putative luciferase-like monooxygenase compare
BWI76_RS25365 +0.4 3.0 serine endoprotease DegQ compare
BWI76_RS11525 +0.4 1.4 HNH endonuclease compare
BWI76_RS22640 +0.4 1.2 hypothetical protein compare
BWI76_RS16515 +0.4 1.4 LysR family transcriptional regulator compare
BWI76_RS22310 +0.4 1.7 hydrogenase 3 small subunit compare
BWI76_RS16765 +0.4 1.8 spermidine/putrescine ABC transporter permease compare
BWI76_RS04965 +0.4 2.3 ABC transporter ATP-binding protein compare
BWI76_RS12270 +0.4 1.1 hypothetical protein compare
BWI76_RS13625 +0.4 1.1 hypothetical protein compare
BWI76_RS09625 +0.4 1.0 hypothetical protein compare
BWI76_RS24665 +0.4 1.7 LsrR family transcriptional regulator compare
BWI76_RS24915 +0.4 3.0 penicillin-binding protein activator compare
BWI76_RS17045 +0.4 0.9 hypothetical protein compare
BWI76_RS18230 +0.4 1.7 trehalose-6-phosphate synthase compare
BWI76_RS22430 +0.4 1.5 manganese/iron transporter ATP-binding protein compare
BWI76_RS19850 +0.4 1.2 tRNA-Pro compare
BWI76_RS19520 +0.4 2.8 acetyltransferase GCN5 compare
BWI76_RS26425 +0.4 3.2 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS06895 +0.4 1.2 biopolymer transporter ExbB compare
BWI76_RS18810 +0.4 1.3 nitrogenase iron protein compare
BWI76_RS22095 +0.4 1.7 multidrug export protein EmrA compare
BWI76_RS15825 +0.4 0.6 hypothetical protein compare
BWI76_RS07525 +0.4 1.5 ABC transporter permease compare
BWI76_RS26780 +0.4 2.9 cellulose synthase regulator BcsB compare
BWI76_RS16165 +0.4 2.6 peptidase M20 compare
BWI76_RS16810 +0.4 1.7 RpiR family transcriptional regulator compare
BWI76_RS14230 +0.4 1.8 flavin monoamine oxidase family protein compare
BWI76_RS02190 +0.4 1.5 ribose 1,5-bisphosphokinase compare
BWI76_RS21345 +0.4 1.3 sigma-E factor regulatory protein RseB compare
BWI76_RS16930 +0.4 2.1 transcriptional regulator compare
BWI76_RS27245 +0.4 2.0 glycosyl transferase family protein compare
BWI76_RS06080 +0.4 1.3 taurine dioxygenase compare
BWI76_RS22665 +0.4 1.4 tRNA pseudouridine(13) synthase TruD compare
BWI76_RS12895 +0.4 1.3 hypothetical protein compare
BWI76_RS22960 +0.4 1.0 YgdI/YgdR family lipoprotein compare
BWI76_RS07765 +0.4 1.0 thioesterase compare
BWI76_RS13360 +0.4 2.7 benzoate transporter compare
BWI76_RS11245 +0.4 1.4 spermidine/putrescine ABC transporter permease PotC compare
BWI76_RS22000 +0.4 2.4 hypothetical protein compare
BWI76_RS19695 +0.4 1.2 membrane protein compare
BWI76_RS21810 +0.4 0.4 universal stress protein compare
BWI76_RS22515 +0.4 2.0 acyl dehydratase compare
BWI76_RS21220 +0.4 1.6 membrane protein compare
BWI76_RS17820 +0.4 1.5 hypothetical protein compare
BWI76_RS04055 +0.4 3.4 GGDEF domain-containing protein compare
BWI76_RS16690 +0.4 1.4 peptide ABC transporter permease compare
BWI76_RS15530 +0.4 1.1 hypothetical protein compare
BWI76_RS15190 +0.4 2.4 GGDEF domain-containing protein compare
BWI76_RS06340 +0.4 0.6 hypothetical protein compare
BWI76_RS11810 +0.4 0.9 outer membrane protein OmpW compare
BWI76_RS21715 +0.4 1.2 transcriptional regulator compare
BWI76_RS15260 +0.4 0.9 hypothetical protein compare
BWI76_RS12420 +0.4 0.7 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS00795 +0.4 1.0 carboxymuconolactone decarboxylase compare
BWI76_RS20770 +0.4 1.9 reactivating factor for ethanolamine ammonia lyase compare
BWI76_RS00790 +0.4 2.5 bifunctional aspartokinase II/homoserine dehydrogenase II compare
BWI76_RS05895 +0.4 1.5 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS18180 +0.4 2.1 hypothetical protein compare
BWI76_RS25245 +0.4 1.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS09140 +0.4 2.5 glutathione S-transferase compare
BWI76_RS20020 +0.4 1.7 nucleoside triphosphatase NudI compare
BWI76_RS04560 +0.4 0.9 holo-ACP synthase CitX compare
BWI76_RS17370 +0.4 0.7 nitrate transporter NasD compare
BWI76_RS04305 +0.4 0.5 molecular chaperone DnaJ compare
BWI76_RS12490 +0.4 1.5 AbrB family transcriptional regulator compare
BWI76_RS00515 +0.4 2.3 PTS fructose transporter subunit IIA compare
BWI76_RS06630 +0.4 0.9 hypothetical protein compare
BWI76_RS27760 +0.4 0.9 lactam utilization protein LamB compare
BWI76_RS17185 +0.4 1.7 fructosamine kinase family protein compare
BWI76_RS21245 +0.4 1.3 nitrogen regulatory protein P-II compare
BWI76_RS01270 +0.4 1.7 hypothetical protein compare
BWI76_RS03995 +0.4 1.9 hypothetical protein compare
BWI76_RS08405 +0.4 1.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS04400 +0.4 1.3 alanyl-tRNA synthetase compare
BWI76_RS21020 +0.4 2.3 MFS transporter compare
BWI76_RS13110 +0.4 1.4 phenylacetic acid degradation protein compare
BWI76_RS08375 +0.4 1.3 pyroglutamyl-peptidase I compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source D-Glucose across organisms