Experiment set8IT052 for Klebsiella michiganensis M5al

Compare to:

Dilute LB (1/10)

200 most important genes:

  gene name fitness t score description  
BWI76_RS05120 -7.2 -12.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09645 -7.0 -3.0 thioredoxin-disulfide reductase compare
BWI76_RS04510 -6.0 -4.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS26460 -5.5 -7.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS13920 -5.5 -10.0 magnesium-translocating P-type ATPase compare
BWI76_RS01325 -5.3 -4.7 twin-arginine translocase subunit TatB compare
BWI76_RS23265 -5.0 -4.7 hypothetical protein compare
BWI76_RS17720 -4.8 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05200 -4.8 -3.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15115 -4.7 -6.4 MFS transporter compare
BWI76_RS11155 -4.7 -4.5 penicillin-binding protein activator LpoB compare
BWI76_RS00180 -4.2 -2.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04715 -4.1 -2.2 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS04705 -3.8 -10.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS09660 -3.8 -2.6 DNA translocase FtsK compare
BWI76_RS17975 -3.8 -7.2 tail-specific protease compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS15225 -3.3 -3.4 DeoR family transcriptional regulator compare
BWI76_RS23240 -3.1 -4.2 exonuclease V subunit gamma compare
BWI76_RS02530 -3.0 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS26455 -2.7 -4.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS06525 -2.7 -8.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS16965 -2.6 -4.7 murein lipoprotein compare
BWI76_RS25065 -2.6 -3.1 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00140 -2.5 -2.1 phosphate transport system regulator PhoU compare
BWI76_RS08405 -2.4 -4.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS15110 -2.4 -13.4 putative excinuclease ABC subunit A compare
BWI76_RS19840 -2.4 -2.0 hypothetical protein compare
BWI76_RS13915 -2.4 -5.0 magnesium transport protein MgtC compare
BWI76_RS04465 -2.3 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01185 -2.2 -2.6 adenylate cyclase compare
BWI76_RS09970 -2.1 -3.3 porin OmpA compare
BWI76_RS25060 -2.0 -4.1 lipoprotein NlpI compare
BWI76_RS01330 -2.0 -3.4 twin-arginine translocase subunit TatC compare
BWI76_RS17980 -1.9 -3.6 RNA chaperone ProQ compare
BWI76_RS06530 -1.9 -4.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS02735 -1.9 -4.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS23480 -1.8 -10.5 EAL domain-containing protein compare
BWI76_RS04470 -1.8 -8.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS06765 -1.7 -3.6 transcriptional regulator compare
BWI76_RS00345 -1.7 -2.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS10990 -1.7 -2.7 dihydroorotase compare
BWI76_RS01870 -1.6 -6.8 diacylglycerol kinase compare
BWI76_RS01210 -1.6 -1.9 tyrosine recombinase XerC compare
BWI76_RS27385 -1.6 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS26665 -1.6 -4.0 DNA-binding response regulator compare
BWI76_RS01205 -1.6 -2.7 DUF484 family protein compare
BWI76_RS03105 -1.5 -1.6 myo-inosose-2 dehydratase compare
BWI76_RS25870 -1.5 -2.3 elongation factor Tu compare
BWI76_RS05015 -1.5 -3.1 transcriptional regulator compare
BWI76_RS25425 -1.5 -2.3 arginine repressor compare
BWI76_RS08525 -1.5 -2.6 colicin transporter compare
BWI76_RS04530 -1.4 -2.1 peptidylprolyl isomerase SurA compare
BWI76_RS15850 -1.4 -0.8 DUF1317 domain-containing protein compare
BWI76_RS01800 -1.4 -2.7 glucose-6-phosphate isomerase compare
BWI76_RS06015 -1.4 -2.2 hypothetical protein compare
BWI76_RS11965 -1.4 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS15955 -1.4 -5.5 transcriptional regulator compare
BWI76_RS21370 -1.4 -3.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS09910 -1.4 -10.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS13595 -1.4 -3.3 transcriptional regulator compare
BWI76_RS19770 -1.3 -2.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS00600 -1.3 -4.4 LacI family transcriptional regulator compare
BWI76_RS02995 -1.3 -5.1 aspartate carbamoyltransferase compare
BWI76_RS15840 -1.3 -2.3 prophage protein compare
BWI76_RS26620 -1.3 -1.4 Fe-S biogenesis protein NfuA compare
BWI76_RS20380 -1.3 -1.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS22755 -1.3 -4.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25335 -1.3 -3.8 stringent starvation protein A compare
BWI76_RS26570 -1.3 -3.1 anion permease compare
BWI76_RS01350 -1.3 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS26775 -1.2 -3.1 endo-1,4-D-glucanase compare
BWI76_RS08210 -1.2 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26425 -1.2 -6.8 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS18715 -1.2 -6.1 hypothetical protein compare
BWI76_RS08520 -1.2 -2.7 colicin transporter TolQ compare
BWI76_RS20360 -1.2 -1.4 cell division protein DedD compare
BWI76_RS12090 -1.2 -2.2 HNH endonuclease compare
BWI76_RS27390 -1.1 -3.0 ribonuclease PH compare
BWI76_RS16935 -1.1 -1.5 shikimate dehydrogenase compare
BWI76_RS26440 -1.1 -1.6 hypothetical protein compare
BWI76_RS26670 -1.1 -5.3 two-component sensor histidine kinase compare
BWI76_RS18710 -1.1 -8.1 GGDEF-domain containing protein compare
BWI76_RS19845 -1.1 -3.8 phosphatase compare
BWI76_RS20650 -1.1 -2.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS02815 -1.1 -2.7 fructose-bisphosphatase class I compare
BWI76_RS04305 -1.1 -1.2 molecular chaperone DnaJ compare
BWI76_RS25700 -1.1 -6.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS00355 -1.1 -1.7 DNA polymerase I compare
BWI76_RS06770 -1.1 -6.2 Hha toxicity attenuator compare
BWI76_RS24025 -1.0 -4.3 agmatinase compare
BWI76_RS12145 -1.0 -2.1 hypothetical protein compare
BWI76_RS26390 -1.0 -3.0 cell division protein FtsX compare
BWI76_RS07985 -1.0 -1.1 fluoride ion transporter CrcB compare
BWI76_RS09755 -1.0 -2.8 phosphoserine transaminase compare
BWI76_RS08395 -0.9 -2.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS24900 -0.9 -1.5 DeoR family transcriptional regulator compare
BWI76_RS00400 -0.9 -1.0 glutamine synthetase compare
BWI76_RS19100 -0.9 -5.5 putative acid phosphatase compare
BWI76_RS02410 -0.9 -1.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS15825 -0.9 -1.3 hypothetical protein compare
BWI76_RS08205 -0.9 -3.7 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS21450 -0.9 -1.7 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS26470 -0.9 -3.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS26095 -0.9 -1.1 shikimate kinase compare
BWI76_RS17155 -0.9 -1.0 hypothetical protein compare
BWI76_RS08040 -0.9 -2.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS21675 -0.9 -1.6 hypothetical protein compare
BWI76_RS07070 -0.8 -2.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS09190 -0.8 -2.2 hypothetical protein compare
BWI76_RS17190 -0.8 -1.4 TonB system transport protein TonB compare
BWI76_RS08385 -0.8 -1.7 citrate (Si)-synthase compare
BWI76_RS15830 -0.8 -1.3 hypothetical protein compare
BWI76_RS22650 -0.8 -3.3 lipoprotein NlpD compare
BWI76_RS08020 -0.8 -3.4 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS16275 -0.8 -2.4 fumarate hydratase FumA compare
BWI76_RS21070 -0.8 -1.3 outer membrane protein assembly factor BamB compare
BWI76_RS16485 -0.8 -1.0 ribonuclease T compare
BWI76_RS15680 -0.8 -3.1 hypothetical protein compare
BWI76_RS26175 -0.8 -2.3 DeoR/GlpR family transcriptional regulator compare
BWI76_RS19465 -0.8 -2.0 hypothetical protein compare
BWI76_RS20900 -0.8 -1.1 outer membrane protein assembly factor BamC compare
BWI76_RS21580 -0.8 -1.3 SsrA-binding protein compare
BWI76_RS22420 -0.8 -1.7 LacI family transcriptional regulator compare
BWI76_RS26080 -0.8 -2.1 cell division protein DamX compare
BWI76_RS04160 -0.8 -3.3 phosphoserine phosphatase compare
BWI76_RS02580 -0.8 -0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS23655 -0.8 -3.7 DeoR family transcriptional regulator compare
BWI76_RS21795 -0.8 -2.5 EAL domain-containing protein compare
BWI76_RS19705 -0.8 -3.1 kinase compare
BWI76_RS21350 -0.8 -2.2 anti-RNA polymerase sigma factor SigE compare
BWI76_RS14980 -0.8 -1.5 hypothetical protein compare
BWI76_RS05070 -0.8 -1.3 type II secretion system protein GspH compare
BWI76_RS21685 -0.8 -1.2 hypothetical protein compare
BWI76_RS01200 -0.8 -1.3 diaminopimelate epimerase compare
BWI76_RS15835 -0.8 -0.7 hypothetical protein compare
BWI76_RS21140 -0.7 -2.2 molecular chaperone HscA compare
BWI76_RS25280 -0.7 -1.6 RNase adaptor protein RapZ compare
BWI76_RS00710 -0.7 -1.4 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS13250 -0.7 -1.2 cytochrome b561 compare
BWI76_RS26075 -0.7 -2.8 DNA adenine methylase compare
BWI76_RS24850 -0.7 -3.6 DeoR family transcriptional regulator compare
BWI76_RS25960 -0.7 -2.1 NUDIX hydrolase compare
BWI76_RS25600 -0.7 -0.8 tRNA-Thr compare
BWI76_RS23830 -0.7 -4.3 hypothetical protein compare
BWI76_RS08530 -0.7 -1.6 protein TolA compare
BWI76_RS04570 -0.7 -3.1 RNA polymerase-associated protein RapA compare
BWI76_RS03225 -0.7 -4.1 transcriptional regulator compare
BWI76_RS27235 -0.7 -4.2 murein hydrolase activator EnvC compare
BWI76_RS22765 -0.7 -5.0 sulfite reductase subunit alpha compare
BWI76_RS07640 -0.7 -1.6 short chain dehydrogenase compare
BWI76_RS25505 -0.7 -3.7 RNase E specificity factor CsrD compare
BWI76_RS21690 -0.7 -1.0 hypothetical protein compare
BWI76_RS22125 -0.7 -1.2 membrane protein compare
BWI76_RS13420 -0.7 -1.2 ABC transporter permease compare
BWI76_RS26200 -0.7 -2.6 starch synthase compare
BWI76_RS24120 -0.7 -3.5 YggW family oxidoreductase compare
BWI76_RS01060 -0.7 -3.2 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
BWI76_RS15940 -0.7 -1.8 DMSO reductase maturation protein DsmD compare
BWI76_RS08390 -0.7 -2.1 hypothetical protein compare
BWI76_RS22485 -0.7 -2.2 hypothetical protein compare
BWI76_RS12780 -0.7 -1.3 hypothetical protein compare
BWI76_RS09610 -0.7 -3.0 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS08535 -0.7 -1.1 translocation protein TolB compare
BWI76_RS01630 -0.7 -1.0 16S ribosomal RNA compare
BWI76_RS01115 -0.7 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS02765 -0.7 -2.9 membrane protein compare
BWI76_RS21660 -0.7 -1.4 antirestriction protein compare
BWI76_RS06225 -0.7 -2.4 exonuclease sbcCD subunit D compare
BWI76_RS15215 -0.6 -1.0 N-acetyltransferase compare
BWI76_RS09825 -0.6 -2.8 envelope biogenesis factor ElyC compare
BWI76_RS09305 -0.6 -2.0 hypothetical protein compare
BWI76_RS19480 -0.6 -1.6 transcriptional regulator compare
BWI76_RS13030 -0.6 -1.5 site-specific recombinase, phage integrase family protein compare
BWI76_RS07710 -0.6 -2.0 invasin-like protein compare
BWI76_RS22760 -0.6 -3.5 sulfite reductase subunit beta compare
BWI76_RS01105 -0.6 -3.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS00095 -0.6 -1.9 DNA-binding transcriptional regulator compare
BWI76_RS11275 -0.6 -3.9 sensor protein PhoQ compare
BWI76_RS01220 -0.6 -2.9 DNA-dependent helicase II compare
BWI76_RS05450 -0.6 -1.2 ribonuclease HI compare
BWI76_RS06540 -0.6 -1.9 DNA-binding protein HU-beta compare
BWI76_RS26085 -0.6 -0.8 3-dehydroquinate synthase compare
BWI76_RS18950 -0.6 -1.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS02520 -0.6 -4.1 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS09030 -0.6 -2.2 transpeptidase compare
BWI76_RS14390 -0.6 -1.3 hypothetical protein compare
BWI76_RS08720 -0.6 -1.4 imidazolonepropionase compare
BWI76_RS01775 -0.6 -0.8 hypothetical protein compare
BWI76_RS15290 -0.6 -0.9 transcriptional regulator compare
BWI76_RS01085 -0.6 -2.2 polysaccharide chain length modulation protein compare
BWI76_RS27475 -0.6 -3.7 regulatory protein GntR family protein compare
BWI76_RS19375 -0.6 -0.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS09490 -0.6 -1.6 DNA-binding response regulator compare
BWI76_RS10745 -0.5 -0.8 hypothetical protein compare
BWI76_RS09960 -0.5 -1.1 Lon protease compare
BWI76_RS16335 -0.5 -1.2 division septum protein Blr compare
BWI76_RS10705 -0.5 -1.8 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) compare
BWI76_RS01190 -0.5 -1.5 iron donor protein CyaY compare
BWI76_RS25300 -0.5 -1.5 hybrid sensor histidine kinase/response regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in lb dilute experiments