Experiment set8IT051 for Dechlorosoma suillum PS

Compare to:

Anaerobic, acetate donor; nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1170 -4.4 -1.4 heme exporter protein CcmD compare
Dsui_1647 -4.3 -15.5 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_1460 -4.0 -14.7 cAMP-binding protein compare
Dsui_3034 -4.0 -18.5 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_3220 -3.5 -3.3 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0019 -3.2 -10.5 malate synthase A compare
Dsui_1177 -3.1 -13.3 Ethylbenzene dehydrogenase compare
Dsui_1176 -3.1 -14.0 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_0011 -2.8 -11.3 isocitrate lyase compare
Dsui_2151 -2.7 -4.7 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_0510 -2.6 -4.6 ferredoxin-type protein, NapH/MauN family compare
Dsui_0004 -2.4 -7.3 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_1250 -2.3 -11.9 sulfate permease-like transporter, MFS superfamily compare
Dsui_2717 -2.3 -1.9 RNA polymerase-binding protein DksA compare
Dsui_2153 -2.2 -6.9 molybdopterin converting factor, subunit 1 compare
Dsui_1576 -2.2 -2.0 dihydrolipoamide dehydrogenase compare
Dsui_3424 -2.1 -3.4 ATP:cob(I)alamin adenosyltransferase compare
Dsui_2651 -2.1 -3.1 ankyrin repeat-containing protein compare
Dsui_0499 -2.1 -1.3 DNA-directed RNA polymerase, omega subunit compare
Dsui_1321 -2.0 -3.3 ABC-type uncharacterized transport system, permease component compare
Dsui_0508 -1.9 -11.7 periplasmic nitrate reductase, large subunit compare
Dsui_0507 -1.9 -4.5 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_3117 -1.9 -5.1 hypothetical protein compare
Dsui_0509 -1.8 -7.2 MauM/NapG family ferredoxin-type protein compare
Dsui_0563 -1.8 -9.4 molybdate ABC transporter, permease protein compare
Dsui_1930 -1.8 -6.0 transcriptional regulator compare
Dsui_2152 -1.8 -3.5 molybdenum cofactor synthesis domain protein compare
Dsui_1992 -1.8 -2.1 ribosomal protein L9 compare
Dsui_1600 -1.7 -7.0 putative enzyme of heme biosynthesis compare
Dsui_0134 -1.7 -7.4 negative regulator of beta-lactamase expression compare
Dsui_0562 -1.7 -6.9 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Dsui_1037 -1.7 -1.2 ribosomal protein L25, Ctc-form compare
Dsui_0905 -1.7 -11.9 hypothetical protein compare
Dsui_3081 -1.6 -1.4 chaperone protein DnaK compare
Dsui_3109 -1.6 -4.7 cytochrome c, mono- and diheme variants family compare
Dsui_2154 -1.6 -2.1 molybdopterin converting factor, large subunit compare
Dsui_1236 -1.6 -7.1 molybdenum cofactor synthesis domain protein compare
Dsui_3110 -1.5 -5.6 nitric oxide reductase large subunit compare
Dsui_1976 -1.5 -9.0 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_0564 -1.5 -5.7 molybdenum ABC transporter, ATP-binding protein compare
Dsui_2189 -1.5 -1.4 acyl-CoA synthetase (NDP forming) compare
Dsui_3102 -1.5 -2.7 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_2549 -1.5 -4.5 hypothetical protein compare
Dsui_2501 -1.4 -2.8 TniQ protein compare
Dsui_0992 -1.4 -1.1 putative membrane protein compare
Dsui_1928 -1.4 -3.0 cytochrome c, mono- and diheme variants family compare
Dsui_1932 -1.4 -3.4 transcriptional regulator compare
Dsui_0127 -1.3 -6.1 transcriptional regulator compare
Dsui_2457 -1.3 -3.9 GTP-binding protein LepA compare
Dsui_1759 -1.3 -3.4 flagellar hook-basal body complex protein FliE compare
Dsui_3181 -1.3 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_3120 -1.3 -3.5 cAMP-binding protein compare
Dsui_0608 -1.3 -5.6 nucleoside-diphosphate-sugar epimerase compare
Dsui_1275 -1.3 -1.8 protein-export chaperone SecB compare
Dsui_3126 -1.3 -5.2 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3240 -1.3 -5.1 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_2816 -1.3 -0.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0180 -1.3 -2.7 hypothetical protein compare
Dsui_0624 -1.2 -2.7 hypothetical protein compare
Dsui_0964 -1.2 -2.2 putative lipid carrier protein compare
Dsui_3531 -1.2 -2.0 Protein of unknown function (DUF3619) compare
Dsui_1929 -1.2 -5.4 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_0246 -1.2 -4.2 mraZ protein compare
Dsui_1544 -1.2 -5.0 Protein of unknown function (DUF3108) compare
Dsui_2694 -1.2 -0.9 ribosomal protein S2 compare
Dsui_1059 -1.2 -1.6 thiamine monophosphate synthase compare
Dsui_3306 -1.2 -7.2 hypothetical protein compare
Dsui_2554 -1.1 -1.2 hypothetical protein compare
Dsui_2594 -1.1 -3.5 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2761 -1.1 -1.4 hypothetical protein compare
Dsui_1873 -1.1 -2.9 transcriptional regulator compare
Dsui_3305 -1.1 -5.8 parallel beta-helix repeat (two copies) compare
Dsui_3301 -1.1 -5.3 NosL compare
Dsui_3308 -1.1 -3.4 cytochrome c553 compare
Dsui_0962 -1.1 -5.7 collagenase-like protease compare
Dsui_3484 -1.1 -1.1 putative permease compare
Dsui_1841 -1.0 -3.5 hypothetical protein compare
Dsui_2199 -1.0 -0.9 bacterial nucleoid DNA-binding protein compare
Dsui_2368 -1.0 -3.4 serine O-acetyltransferase compare
Dsui_0990 -1.0 -0.6 putative P-loop-containing kinase compare
Dsui_2593 -1.0 -2.9 PilS N terminal protein compare
Dsui_0177 -1.0 -3.1 hypothetical protein compare
Dsui_2963 -1.0 -2.8 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit compare
Dsui_3309 -1.0 -6.3 nitrous oxide reductase compare
Dsui_1599 -1.0 -3.4 putative enzyme of heme biosynthesis compare
Dsui_3114 -1.0 -2.7 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_0945 -1.0 -2.2 Iron-sulfur cluster assembly accessory protein compare
Dsui_1235 -1.0 -1.6 hypothetical protein compare
Dsui_1084 -1.0 -3.8 bacteriophage protein gp37 compare
Dsui_1533 -0.9 -2.7 disulfide bond formation protein DsbB compare
Dsui_1687 -0.9 -2.1 nitrogen regulatory protein PII compare
Dsui_1969 -0.9 -4.4 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_0245 -0.9 -1.4 S-adenosyl-methyltransferase MraW compare
Dsui_1482 -0.9 -1.6 hypothetical protein compare
Dsui_3303 -0.9 -4.7 ferredoxin-type protein, NapH/MauN family compare
Dsui_0540 -0.9 -3.8 L-threonine-O-3-phosphate decarboxylase compare
Dsui_2607 -0.9 -0.5 hypothetical protein compare
Dsui_1091 -0.9 -3.9 protein-disulfide isomerase compare
Dsui_0747 -0.9 -2.3 glutamate--cysteine ligase compare
Dsui_2632 -0.9 -1.0 hypothetical protein compare
Dsui_0621 -0.9 -1.5 RNA polymerase sigma factor, sigma-70 family compare
Dsui_2259 -0.8 -1.6 hypothetical protein compare
Dsui_3261 -0.8 -4.7 6-phosphofructokinase compare
Dsui_3169 -0.8 -2.4 putative metal-binding protein compare
Dsui_1434 -0.8 -2.7 methylase of chemotaxis methyl-accepting protein compare
Dsui_2277 -0.8 -2.1 Rhs element Vgr protein compare
Dsui_0573 -0.8 -1.2 ferredoxin-like protein compare
Dsui_1944 -0.8 -3.6 integration host factor, beta subunit compare
Dsui_3031 -0.8 -3.4 enoyl-(acyl-carrier-protein) reductase (NADH) compare
Dsui_0154 -0.8 -7.4 hypothetical protein compare
Dsui_1032 -0.8 -2.7 Flp pilus assembly protein TadD compare
Dsui_3532 -0.8 -3.0 Protein of unknown function (DUF3106) compare
Dsui_0122 -0.8 -2.2 D-tyrosyl-tRNA(Tyr) deacylase compare
Dsui_3139 -0.8 -1.4 outer membrane assembly lipoprotein YfgL compare
Dsui_2378 -0.8 -0.9 hypothetical protein compare
Dsui_0205 -0.8 -1.9 Conserved hypothetical protein 2217 (DUF2460) compare
Dsui_3307 -0.8 -3.0 cytochrome c553 compare
Dsui_3404 -0.8 -1.6 glutamine synthetase adenylyltransferase compare
Dsui_0675 -0.8 -1.1 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_1609 -0.8 -1.6 Thiopurine S-methyltransferase (TPMT) compare
Dsui_0799 -0.8 -5.7 succinate CoA transferase compare
Dsui_0734 -0.8 -1.0 acetyltransferase compare
Dsui_1495 -0.8 -0.8 molecular chaperone (small heat shock protein) compare
Dsui_0901 -0.8 -0.9 hypothetical protein compare
Dsui_2935 -0.8 -2.7 NAD/NADP transhydrogenase alpha subunit compare
Dsui_0544 -0.8 -1.2 flagellar basal body-associated protein compare
Dsui_0862 -0.8 -1.2 hypothetical protein compare
Dsui_0606 -0.8 -2.3 putative N6-adenine-specific DNA methylase compare
Dsui_1620 -0.8 -2.1 PAP2 (acid phosphatase) superfamily protein compare
Dsui_0459 -0.8 -1.1 DNA polymerase I compare
Dsui_2614 -0.8 -1.0 hypothetical protein compare
Dsui_2961 -0.7 -1.8 precorrin isomerase compare
Dsui_3302 -0.7 -3.0 ABC-type multidrug transport system, ATPase component compare
Dsui_2437 -0.7 -3.3 pseudouridine synthase, RluA family compare
Dsui_0650 -0.7 -2.5 hypothetical protein compare
Dsui_3459 -0.7 -2.7 septum site-determining protein MinD compare
Dsui_2195 -0.7 -3.4 trigger factor compare
Dsui_2941 -0.7 -1.5 hypothetical protein compare
Dsui_0520 -0.7 -3.8 transcriptional regulator compare
Dsui_2781 -0.7 -1.9 PAS domain S-box compare
Dsui_2559 -0.7 -1.6 Protein of unknown function (DUF2523) compare
Dsui_0099 -0.7 -1.7 putative periplasmic or secreted lipoprotein compare
Dsui_0102 -0.7 -2.2 transcription elongation factor compare
Dsui_2466 -0.7 -0.8 ATP dependent DNA ligase-like protein compare
Dsui_2870 -0.7 -1.4 putative permease compare
Dsui_0197 -0.7 -1.4 hypothetical protein compare
Dsui_2204 -0.7 -4.0 ABC-type dipeptide transport system, periplasmic component compare
Dsui_2068 -0.7 -2.7 ABC-type metal ion transport system, ATPase component compare
Dsui_3293 -0.7 -2.2 pseudouridine synthase family protein compare
Dsui_2948 -0.7 -1.6 RNA polymerase sigma factor, sigma-70 family compare
Dsui_3161 -0.7 -3.1 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2630 -0.7 -2.6 flagellar basal-body rod protein FlgB compare
Dsui_2695 -0.7 -2.4 methionine aminopeptidase, type I compare
Dsui_3320 -0.7 -3.0 1,4-dihydroxy-2-naphthoate octaprenyltransferase compare
Dsui_2842 -0.7 -1.7 radical SAM pair-associated protein compare
Dsui_2979 -0.7 -2.0 electron transport complex, RnfABCDGE type, A subunit compare
Dsui_2736 -0.7 -2.2 glycine cleavage system H protein compare
Dsui_2041 -0.7 -2.3 enoyl-CoA hydratase/carnithine racemase compare
Dsui_2762 -0.7 -1.1 Protein of unknown function (DUF3617) compare
Dsui_3213 -0.7 -2.2 CBS domain-containing protein compare
Dsui_1782 -0.7 -2.5 flagellar protein FlaG compare
Dsui_2703 -0.7 -1.5 chromosome segregation protein SMC compare
Dsui_1946 -0.7 -2.9 putative N-acetylglucosaminyl transferase compare
Dsui_0116 -0.7 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_0846 -0.7 -1.4 glucose-inhibited division protein A compare
Dsui_0181 -0.6 -1.3 hypothetical protein compare
Dsui_2180 -0.6 -1.6 hypothetical protein compare
Dsui_2404 -0.6 -1.1 ribosomal-protein-alanine acetyltransferase compare
Dsui_3300 -0.6 -3.7 ABC-2 type transporter compare
Dsui_1931 -0.6 -1.2 transcriptional regulator compare
Dsui_1264 -0.6 -1.7 fructose-2,6-bisphosphatase compare
Dsui_1850 -0.6 -3.1 putative transcriptional regulator compare
Dsui_0399 -0.6 -1.6 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_1730 -0.6 -1.0 flagellar biosynthesis anti-sigma factor FlgM compare
Dsui_2454 -0.6 -1.1 Positive regulator of sigma E activity compare
Dsui_0700 -0.6 -1.2 psiF repeat protein compare
Dsui_1205 -0.6 -2.1 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3527 -0.6 -0.9 ketol-acid reductoisomerase compare
Dsui_1916 -0.6 -1.7 cytochrome d oxidase cyd, subunit II compare
Dsui_2617 -0.6 -0.3 DNA recombination-dependent growth factor C compare
Dsui_1810 -0.6 -1.5 DNA-binding protein, YbaB/EbfC family compare
Dsui_3318 -0.6 -3.1 cytochrome c, mono- and diheme variants family compare
Dsui_1664 -0.6 -1.7 putative periplasmic protein compare
Dsui_2827 -0.6 -2.1 hypothetical protein compare
Dsui_2427 -0.6 -3.3 molybdenum cofactor biosynthesis protein A compare
Dsui_0198 -0.6 -1.5 phage conserved hypothetical protein, phiE125 gp8 family compare
Dsui_0658 -0.6 -1.1 chemotaxis signal transduction protein compare
Dsui_0005 -0.6 -2.9 putative secreted protein compare
Dsui_0971 -0.6 -3.8 poly(R)-hydroxyalkanoic acid synthase, class I compare
Dsui_3096 -0.6 -1.7 NADH dehydrogenase, FAD-containing subunit compare
Dsui_1216 -0.6 -2.7 ybaK/ebsC protein compare
Dsui_1760 -0.6 -3.2 putative O-linked N-acetylglucosamine transferase, SPINDLY family compare
Dsui_3505 -0.6 -1.7 Protein of unknown function (DUF3478) compare
Dsui_2072 -0.6 -1.6 Pirin-related protein compare
Dsui_2031 -0.6 -1.1 putative thioesterase compare
Dsui_3304 -0.6 -2.5 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_1830 -0.5 -1.0 Yip1 domain protein compare
Dsui_0617 -0.5 -0.8 hypothetical protein compare
Dsui_0689 -0.5 -1.5 lysophospholipase compare
Dsui_1885 -0.5 -2.0 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare


Specific Phenotypes

For 1 genes in this experiment

For anaerobic Potassium acetate in Dechlorosoma suillum PS

For anaerobic Potassium acetate across organisms