Experiment set8IT047 for Pseudomonas syringae pv. syringae B728a

Compare to:

library passed through aphids in food, 72 hours

200 most important genes:

  gene name fitness t score description  
Psyr_3281 -5.6 -2.2 Glycoside hydrolase, family 3, N-terminal compare
Psyr_1056 -5.6 -3.5 Poly(beta-D-mannuronate) lyase compare
Psyr_3013 -5.5 -1.7 magnesium chelatase subunit ChlD compare
Psyr_3435 -5.5 -4.3 chemotaxis phosphatase, CheZ compare
Psyr_2973 -5.1 -2.0 Glyoxalase I compare
Psyr_0464 -5.1 -1.8 hypothetical protein compare
Psyr_0044 -5.1 -1.6 transferase hexapeptide repeat protein compare
Psyr_0167 -5.1 -2.7 hypothetical protein compare
Psyr_5036 -4.9 -2.7 Response regulator receiver compare
Psyr_2151 -4.9 -1.2 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_3698 -4.8 -5.9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0014 -4.7 -3.0 lipid A biosynthesis acyltransferase compare
Psyr_1269 -4.7 -3.0 phosphoribosylformylglycinamidine synthase compare
Psyr_4893 -4.7 -1.2 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3690 -4.7 -6.0 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_3886 -4.7 -1.7 methionyl-tRNA synthetase compare
Psyr_3458 -4.6 -1.2 Flagellar hook-basal body complex protein FliE compare
Psyr_3673 -4.6 -1.6 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4262 -4.6 -1.2 lipoprotein, putative compare
Psyr_3262 -4.5 -1.8 dnaK suppressor protein, putative compare
Psyr_0487 -4.5 -2.5 glutathione synthase compare
Psyr_3184 -4.4 -3.8 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_4882 -4.4 -8.8 protein translocase subunit secB compare
Psyr_1668 -4.3 -8.3 amidophosphoribosyltransferase compare
Psyr_1121 -4.3 -1.5 6-phosphogluconolactonase compare
Psyr_2211 -4.3 -3.1 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_0402 -4.2 -16.9 Peptidoglycan glycosyltransferase compare
Psyr_4622 -4.2 -5.9 Nucleotidyl transferase compare
Psyr_0531 -4.2 -1.8 LmbE-like protein compare
Psyr_4407 -4.1 -2.1 phosphoribosylamine--glycine ligase compare
Psyr_5065 -3.9 -9.5 ATP-dependent DNA helicase UvrD compare
Psyr_3805 -3.9 -2.0 hypothetical protein compare
Psyr_4078 -3.9 -13.8 AmpG-related permease compare
Psyr_2900 -3.9 -2.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_1378 -3.9 -1.8 RecA protein compare
Psyr_1408 -3.8 -1.8 Holliday junction endonuclease RuvC compare
Psyr_4512 -3.8 -4.5 putative phage-related protein compare
Psyr_1247 -3.7 -1.8 conserved hypothetical protein compare
Psyr_0215 -3.6 -12.4 Exodeoxyribonuclease III xth compare
Psyr_3439 -3.6 -5.0 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3445 -3.6 -1.8 Flagellar biosynthesis protein, FliO compare
Psyr_RNA61 -3.5 -2.7 tRNA-Gly compare
Psyr_3463 -3.4 -3.9 Flagellar protein FliS compare
Psyr_3193 -3.3 -1.8 Transcription factor jumonji, jmjC compare
Psyr_0528 -3.2 -1.7 Carbamoyltransferase compare
Psyr_4623 -3.2 -9.7 Aminoglycoside phosphotransferase compare
Psyr_0954 -3.1 -2.0 Protein of unknown function UPF0153 compare
Psyr_1953 -3.1 -1.5 conserved hypothetical protein compare
Psyr_2848 -3.1 -2.5 hypothetical protein compare
Psyr_3701 -3.0 -2.2 thioredoxin, putative compare
Psyr_4158 -3.0 -8.4 conserved hypothetical protein compare
Psyr_0377 -3.0 -7.4 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1410 -2.9 -3.7 Holliday junction DNA helicase RuvB compare
Psyr_2464 -2.9 -6.8 methionine synthase (B12-dependent) compare
Psyr_3427 -2.9 -1.2 conserved hypothetical protein compare
Psyr_0923 -2.9 -4.8 hypothetical protein compare
Psyr_3462 -2.9 -2.2 conserved hypothetical protein compare
Psyr_1447 -2.9 -2.0 conserved hypothetical protein compare
Psyr_1748 -2.8 -5.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3676 -2.8 -3.0 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_0557 -2.8 -4.3 phosphoserine phosphatase compare
Psyr_0979 -2.8 -2.3 conserved hypothetical protein compare
Psyr_4887 -2.8 -7.6 Peptidase S41A, C-terminal protease compare
Psyr_1946 -2.8 -1.9 diaminobutyrate aminotransferase apoenzyme compare
Psyr_4567 -2.8 -3.2 Protein of unknown function UPF0075 compare
Psyr_3446 -2.7 -1.2 Surface presentation of antigens (SPOA) protein compare
Psyr_3301 -2.7 -6.4 Undecaprenyl-phosphate galactosephosphotransferase compare
Psyr_2969 -2.7 -3.8 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3487 -2.7 -4.5 flagellar protein FlgA compare
Psyr_1910 -2.7 -5.4 VacJ-like lipoprotein compare
Psyr_2765 -2.7 -2.8 conserved domain protein compare
Psyr_4415 -2.7 -6.9 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_0529 -2.6 -4.3 Glycosyl transferase, group 1 compare
Psyr_4420 -2.6 -4.4 precorrin-6A reductase compare
Psyr_3202 -2.6 -2.1 NADH dehydrogenase subunit G compare
Psyr_3324 -2.6 -3.3 transcriptional regulator, TetR family compare
Psyr_4335 -2.6 -1.7 transcriptional regulator, AsnC family compare
Psyr_4991 -2.6 -1.3 hypothetical protein compare
Psyr_0434 -2.6 -2.8 AMP-dependent synthetase and ligase compare
Psyr_3474 -2.6 -6.0 Flagellar L-ring protein compare
Psyr_0826 -2.6 -5.8 glucose-6-phosphate isomerase compare
Psyr_5130 -2.6 -6.7 chromosome segregation ATPase compare
Psyr_4896 -2.5 -3.6 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_5132 -2.5 -2.3 Glucose-inhibited division protein A subfamily compare
Psyr_2140 -2.5 -2.7 conserved hypothetical protein compare
Psyr_3443 -2.5 -3.7 Flagellar biosynthesis protein FliQ compare
Psyr_3596 -2.5 -2.3 Selenoprotein W-related protein compare
Psyr_4852 -2.5 -5.6 D-3-phosphoglycerate dehydrogenase compare
Psyr_1372 -2.5 -3.9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_0385 -2.4 -2.6 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3581 -2.4 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_2297 -2.4 -2.3 glucose 1-dehydrogenase compare
Psyr_4270 -2.4 -5.2 serine hydroxymethyltransferase compare
Psyr_2326 -2.4 -5.6 lipoprotein, putative compare
Psyr_4140 -2.4 -2.2 Protein of unknown function DUF140 compare
Psyr_0291 -2.4 -3.4 DedA compare
Psyr_3014 -2.4 -2.1 protoporphyrin IX magnesium-chelatase compare
Psyr_2594 -2.4 -1.5 unknown conserved protein in bacilli compare
Psyr_3674 -2.4 -1.5 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0983 -2.4 -4.7 Protein of unknown function DUF159 compare
Psyr_3447 -2.4 -2.8 Flagellar motor switch protein FliM compare
Psyr_1983 -2.3 -2.4 3-isopropylmalate dehydratase, large subunit compare
Psyr_3172 -2.3 -4.2 Glycosyl transferase, family 3 compare
Psyr_3473 -2.3 -1.2 Flagellar P-ring protein compare
Psyr_3303 -2.3 -3.9 Polysaccharide export protein compare
Psyr_4473 -2.3 -4.9 OmpW compare
Psyr_5133 -2.3 -4.0 tRNA modification GTPase trmE compare
Psyr_1588 -2.3 -2.4 Putative exonuclease, RdgC compare
Psyr_3469 -2.3 -7.2 Glycosyl transferase, family 2 compare
Psyr_3808 -2.2 -0.6 hypothetical protein compare
Psyr_3304 -2.2 -5.0 Lipopolysaccharide biosynthesis compare
Psyr_4361 -2.2 -2.9 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_1733 -2.2 -1.1 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_3675 -2.2 -2.4 adenosylcobinamide kinase compare
Psyr_3637 -2.2 -6.3 Glycosyl transferase, family 4 compare
Psyr_3308 -2.2 -6.5 Glycosyl transferase, group 1 compare
Psyr_3470 -2.1 -6.8 Flagellin, N-terminal compare
Psyr_0885 -2.1 -1.0 conserved hypothetical protein compare
Psyr_1944 -2.1 -2.2 Thioesterase compare
Psyr_1811 -2.1 -1.3 transcriptional regulator, GntR family compare
Psyr_0200 -2.1 -5.1 conserved hypothetical protein compare
Psyr_3179 -2.1 -2.4 DNA translocase FtsK compare
Psyr_1985 -2.1 -4.9 3-isopropylmalate dehydrogenase compare
Psyr_3485 -2.1 -4.6 MCP methyltransferase, CheR-type compare
Psyr_3448 -2.1 -4.2 Flagellar basal body-associated protein FliL compare
Psyr_4733 -2.1 -3.5 betaine aldehyde dehydrogenase compare
Psyr_4716 -2.1 -2.2 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_3677 -2.1 -2.3 Aminotransferase, class I and II compare
Psyr_0579 -2.1 -8.3 RNAse R compare
Psyr_4894 -2.1 -4.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_1614 -2.1 -1.9 lipid A biosynthesis acyltransferase compare
Psyr_1594 -2.0 -2.1 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3457 -2.0 -3.6 Flagellar FliF M-ring protein compare
Psyr_3441 -2.0 -6.4 Flagellar biosynthetic protein FlhB compare
Psyr_1152 -2.0 -2.1 transcriptional regulator, ArsR family compare
Psyr_0493 -2.0 -1.6 CheW-like protein compare
Psyr_4113 -2.0 -4.5 LppC putative lipoprotein compare
Psyr_3015 -2.0 -4.3 cobaltochelatase CobN subunit compare
Psyr_2942 -2.0 -2.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0378 -2.0 -5.4 Glycosyl transferase, family 2 compare
Psyr_3437 -2.0 -5.5 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG compare
Psyr_2695 -1.9 -2.2 conserved hypothetical protein compare
Psyr_3454 -1.9 -4.4 ATPase FliI/YscN compare
Psyr_1270 -1.9 -1.0 conserved hypothetical protein compare
Psyr_2930 -1.9 -1.8 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_3475 -1.9 -1.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3854 -1.9 -0.8 OmpA/MotB compare
Psyr_4115 -1.9 -1.7 phosphoheptose isomerase compare
Psyr_4880 -1.9 -2.9 conserved hypothetical protein compare
Psyr_4673 -1.9 -1.3 Coenzyme PQQ synthesis D compare
Psyr_3691 -1.9 -3.6 conserved hypothetical protein compare
Psyr_4139 -1.9 -4.3 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2979 -1.9 -4.6 NADPH-glutathione reductase compare
Psyr_1747 -1.8 -2.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3290 -1.8 -1.5 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3280 -1.8 -2.0 methylthioadenosine phosphorylase compare
Psyr_1935 -1.8 -3.2 Protein of unknown function DUF796 compare
Psyr_3680 -1.8 -2.0 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_2897 -1.8 -3.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2694 -1.8 -1.3 conserved hypothetical protein compare
Psyr_3471 -1.8 -5.4 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_1148 -1.8 -3.1 branched chain amino acid aminotransferase apoenzyme compare
Psyr_0858 -1.8 -1.9 conserved hypothetical protein compare
Psyr_3934 -1.8 -1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_3481 -1.7 -3.5 Flagellar basal-body rod protein FlgB compare
Psyr_3480 -1.7 -2.3 Flagellar basal-body rod protein FlgC compare
Psyr_0916 -1.7 -5.2 GDP-mannose 4,6-dehydratase compare
Psyr_1914 -1.7 -4.4 transaldolase compare
Psyr_2561 -1.7 -2.4 hypothetical protein compare
Psyr_3933 -1.7 -1.6 conserved hypothetical protein compare
Psyr_2347 -1.7 -1.6 hypothetical protein compare
Psyr_2138 -1.7 -6.1 Glycosyl transferase, family 2 compare
Psyr_3461 -1.7 -4.7 Helix-turn-helix, Fis-type compare
Psyr_1645 -1.7 -2.3 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_2270 -1.7 -3.1 transferase hexapeptide repeat protein compare
Psyr_1140 -1.7 -2.4 Disulfide bond formation protein DsbB compare
Psyr_3981 -1.7 -2.8 ribosomal small subunit pseudouridine synthase A compare
Psyr_3199 -1.7 -2.0 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3678 -1.7 -2.8 adenosylcobinamide-phosphate synthase compare
Psyr_0680 -1.7 -3.1 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_4630 -1.7 -3.1 thiosulfate sulfurtransferase compare
Psyr_3174 -1.7 -2.8 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4460 -1.7 -1.3 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0642 -1.7 -1.3 conserved hypothetical protein compare
Psyr_3176 -1.6 -1.7 camphor resistance protein CrcB compare
Psyr_1684 -1.6 -5.6 GGDEF domain protein compare
Psyr_3672 -1.6 -1.9 cobalamin-5'-phosphate synthase compare
Psyr_2397 -1.6 -1.8 transcriptional regulator, LysR family compare
Psyr_3472 -1.6 -4.6 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase compare
Psyr_1676 -1.6 -2.5 1-aminocyclopropane-1-carboxylate deaminase, putative compare
Psyr_4804 -1.6 -1.3 conserved hypothetical protein compare
Psyr_0231 -1.6 -1.3 conserved hypothetical protein compare
Psyr_0255 -1.6 -1.3 glutamate-cysteine ligase compare
Psyr_2190 -1.6 -1.2 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_3478 -1.6 -5.3 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE compare
Psyr_0319 -1.6 -3.3 conserved hypothetical protein compare
Psyr_3696 -1.6 -2.4 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_5101 -1.5 -4.2 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_4678 -1.5 -5.9 GGDEF domain protein compare
Psyr_1687 -1.5 -2.7 Rhomboid-like protein compare


Specific Phenotypes

For 27 genes in this experiment