Experiment set8IT045 for Pseudomonas syringae pv. syringae B728a

Compare to:

library passed through aphids in food, 72 hours

200 most important genes:

  gene name fitness t score description  
Psyr_3013 -6.0 -2.5 magnesium chelatase subunit ChlD compare
Psyr_4882 -5.6 -5.4 protein translocase subunit secB compare
Psyr_1269 -5.0 -3.5 phosphoribosylformylglycinamidine synthase compare
Psyr_3886 -5.0 -2.4 methionyl-tRNA synthetase compare
Psyr_0014 -4.8 -3.3 lipid A biosynthesis acyltransferase compare
Psyr_3462 -4.8 -3.3 conserved hypothetical protein compare
Psyr_0167 -4.7 -4.6 hypothetical protein compare
Psyr_0487 -4.7 -3.2 glutathione synthase compare
Psyr_3473 -4.6 -3.2 Flagellar P-ring protein compare
Psyr_1668 -4.5 -9.4 amidophosphoribosyltransferase compare
Psyr_0531 -4.4 -2.6 LmbE-like protein compare
Psyr_4407 -4.4 -3.0 phosphoribosylamine--glycine ligase compare
Psyr_3466 -4.3 -3.3 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_3489 -4.2 -5.1 FlgN compare
Psyr_3446 -4.0 -1.3 Surface presentation of antigens (SPOA) protein compare
Psyr_4897 -3.9 -3.4 imidazoleglycerol-phosphate dehydratase compare
Psyr_3199 -3.9 -4.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4270 -3.9 -5.9 serine hydroxymethyltransferase compare
Psyr_4158 -3.8 -13.7 conserved hypothetical protein compare
Psyr_0791 -3.7 -1.8 MOSC compare
Psyr_1614 -3.7 -4.0 lipid A biosynthesis acyltransferase compare
Psyr_1121 -3.7 -2.3 6-phosphogluconolactonase compare
Psyr_1378 -3.6 -3.2 RecA protein compare
Psyr_3458 -3.6 -2.2 Flagellar hook-basal body complex protein FliE compare
Psyr_2897 -3.6 -6.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1408 -3.5 -3.0 Holliday junction endonuclease RuvC compare
Psyr_1748 -3.4 -6.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0528 -3.4 -2.4 Carbamoyltransferase compare
Psyr_0402 -3.4 -15.8 Peptidoglycan glycosyltransferase compare
Psyr_4623 -3.3 -13.4 Aminoglycoside phosphotransferase compare
Psyr_1056 -3.3 -4.1 Poly(beta-D-mannuronate) lyase compare
Psyr_3262 -3.2 -2.8 dnaK suppressor protein, putative compare
Psyr_3475 -3.2 -3.6 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3476 -3.2 -2.3 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3690 -3.2 -6.2 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_3435 -3.2 -5.7 chemotaxis phosphatase, CheZ compare
Psyr_0215 -3.1 -10.5 Exodeoxyribonuclease III xth compare
Psyr_0529 -3.1 -5.6 Glycosyl transferase, group 1 compare
Psyr_4512 -3.1 -7.1 putative phage-related protein compare
Psyr_0532 -3.1 -7.4 conserved hypothetical protein compare
Psyr_4567 -3.0 -5.3 Protein of unknown function UPF0075 compare
Psyr_3433 -3.0 -5.2 Protein-glutamate methylesterase compare
Psyr_3281 -3.0 -2.5 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4078 -3.0 -11.8 AmpG-related permease compare
Psyr_0493 -3.0 -2.8 CheW-like protein compare
Psyr_1373 -3.0 -2.0 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3691 -2.9 -8.4 conserved hypothetical protein compare
Psyr_5067 -2.9 -6.5 conserved hypothetical protein compare
Psyr_3463 -2.9 -5.5 Flagellar protein FliS compare
Psyr_5036 -2.9 -3.4 Response regulator receiver compare
Psyr_3193 -2.9 -3.3 Transcription factor jumonji, jmjC compare
Psyr_3893 -2.9 -8.1 OmpA/MotB compare
Psyr_0378 -2.9 -9.7 Glycosyl transferase, family 2 compare
Psyr_3480 -2.8 -4.6 Flagellar basal-body rod protein FlgC compare
Psyr_3443 -2.8 -5.0 Flagellar biosynthesis protein FliQ compare
Psyr_3681 -2.8 -3.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_3478 -2.8 -9.6 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE compare
Psyr_3487 -2.8 -5.7 flagellar protein FlgA compare
Psyr_4991 -2.8 -1.9 hypothetical protein compare
Psyr_3453 -2.7 -6.5 flagellar protein FliJ, putative compare
Psyr_1410 -2.7 -4.2 Holliday junction DNA helicase RuvB compare
Psyr_0557 -2.7 -6.7 phosphoserine phosphatase compare
Psyr_0923 -2.6 -5.9 hypothetical protein compare
Psyr_3447 -2.6 -6.2 Flagellar motor switch protein FliM compare
Psyr_1985 -2.6 -9.7 3-isopropylmalate dehydrogenase compare
Psyr_4622 -2.6 -4.9 Nucleotidyl transferase compare
Psyr_1588 -2.5 -3.8 Putative exonuclease, RdgC compare
Psyr_1633 -2.5 -1.6 MotA/TolQ/ExbB proton channel compare
Psyr_1910 -2.5 -6.5 VacJ-like lipoprotein compare
Psyr_5133 -2.5 -4.1 tRNA modification GTPase trmE compare
Psyr_1645 -2.5 -3.7 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_3805 -2.4 -3.0 hypothetical protein compare
Psyr_3673 -2.4 -2.0 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4408 -2.4 -9.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_5065 -2.4 -7.9 ATP-dependent DNA helicase UvrD compare
Psyr_2973 -2.4 -2.8 Glyoxalase I compare
Psyr_3457 -2.4 -5.5 Flagellar FliF M-ring protein compare
Psyr_3485 -2.4 -7.2 MCP methyltransferase, CheR-type compare
Psyr_4417 -2.4 -2.0 Ferredoxin--nitrite reductase compare
Psyr_4940 -2.3 -2.9 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3309 -2.3 -7.6 membrane protein, putative compare
Psyr_4416 -2.3 -3.7 precorrin-8X methylmutase compare
Psyr_3474 -2.3 -7.7 Flagellar L-ring protein compare
Psyr_3324 -2.3 -4.5 transcriptional regulator, TetR family compare
Psyr_1372 -2.3 -5.3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3454 -2.3 -7.4 ATPase FliI/YscN compare
Psyr_3208 -2.3 -2.5 NADH dehydrogenase subunit M compare
Psyr_3672 -2.3 -3.1 cobalamin-5'-phosphate synthase compare
Psyr_3461 -2.3 -7.9 Helix-turn-helix, Fis-type compare
Psyr_0291 -2.2 -4.9 DedA compare
Psyr_4627 -2.2 -2.3 dimethyladenosine transferase compare
Psyr_3437 -2.2 -8.4 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG compare
Psyr_4887 -2.2 -6.7 Peptidase S41A, C-terminal protease compare
Psyr_3906 -2.2 -2.6 regulatory protein, DeoR compare
Psyr_3303 -2.2 -6.8 Polysaccharide export protein compare
Psyr_3472 -2.2 -6.8 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase compare
Psyr_0200 -2.1 -7.5 conserved hypothetical protein compare
Psyr_4418 -2.1 -2.8 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_3471 -2.1 -7.9 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3680 -2.1 -3.5 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_3698 -2.1 -2.2 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0826 -2.1 -6.7 glucose-6-phosphate isomerase compare
Psyr_0579 -2.1 -11.4 RNAse R compare
Psyr_2464 -2.0 -6.9 methionine synthase (B12-dependent) compare
Psyr_3674 -2.0 -2.6 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0184 -2.0 -1.8 Protein of unknown function DUF484 compare
Psyr_0168 -2.0 -7.5 Phosphoenolpyruvate carboxykinase (ATP) compare
Psyr_1222 -2.0 -2.4 CDS compare
Psyr_3307 -1.9 -10.6 Glycosyl transferase, group 1 compare
Psyr_4141 -1.9 -3.8 ABC transporter compare
Psyr_3198 -1.9 -1.9 NADH dehydrogenase subunit B compare
Psyr_5129 -1.9 -3.8 chromosome segregation DNA-binding protein compare
Psyr_4896 -1.9 -4.5 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_3310 -1.9 -5.1 transferase hexapeptide repeat protein compare
Psyr_0111 -1.9 -4.0 hypothetical protein compare
Psyr_3637 -1.9 -8.8 Glycosyl transferase, family 4 compare
Psyr_3455 -1.9 -3.1 Flagellar assembly protein FliH compare
Psyr_0377 -1.9 -6.1 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3470 -1.9 -7.3 Flagellin, N-terminal compare
Psyr_4194 -1.9 -3.5 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3431 -1.9 -3.5 OmpA/MotB compare
Psyr_2887 -1.9 -2.0 Endoribonuclease L-PSP compare
Psyr_4116 -1.9 -1.6 Transport-associated protein compare
Psyr_3419 -1.8 -3.9 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4415 -1.8 -7.6 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_1251 -1.8 -3.1 quinoprotein compare
Psyr_3469 -1.8 -6.6 Glycosyl transferase, family 2 compare
Psyr_4490 -1.8 -2.4 transcriptional regulator, DeoR family compare
Psyr_0137 -1.8 -1.4 outer membrane transport energization protein ExbD compare
Psyr_1044 -1.8 -7.3 transcriptional regulator, LysR family compare
Psyr_0565 -1.8 -3.6 Protein of unknown function UPF0126 compare
Psyr_3464 -1.8 -5.4 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN compare
Psyr_2969 -1.8 -4.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3677 -1.8 -3.4 Aminotransferase, class I and II compare
Psyr_3301 -1.8 -5.8 Undecaprenyl-phosphate galactosephosphotransferase compare
Psyr_1984 -1.7 -2.1 3-isopropylmalate dehydratase, small subunit compare
Psyr_3678 -1.7 -4.7 adenosylcobinamide-phosphate synthase compare
Psyr_3304 -1.7 -6.8 Lipopolysaccharide biosynthesis compare
Psyr_3257 -1.7 -2.8 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_0561 -1.7 -7.8 chemotaxis motA protein compare
Psyr_4852 -1.7 -6.0 D-3-phosphoglycerate dehydrogenase compare
Psyr_3439 -1.7 -4.7 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3436 -1.7 -4.4 Response regulator receiver compare
Psyr_3428 -1.7 -5.7 CheW-like protein compare
Psyr_1684 -1.7 -7.0 GGDEF domain protein compare
Psyr_3675 -1.7 -1.9 adenosylcobinamide kinase compare
Psyr_1280 -1.7 -4.4 Cytochrome c assembly protein compare
Psyr_3308 -1.7 -6.4 Glycosyl transferase, group 1 compare
Psyr_1914 -1.6 -7.7 transaldolase compare
Psyr_0947 -1.6 -4.2 TPR repeat protein:TPR repeat protein compare
Psyr_0486 -1.6 -7.6 TonB, C-terminal compare
Psyr_3440 -1.6 -4.4 Flagellar biosynthesis protein FlhA compare
Psyr_0575 -1.6 -2.5 protease FtsH subunit HflC compare
Psyr_5130 -1.6 -5.5 chromosome segregation ATPase compare
Psyr_0680 -1.6 -2.9 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_5132 -1.6 -2.5 Glucose-inhibited division protein A subfamily compare
Psyr_3441 -1.6 -5.5 Flagellar biosynthetic protein FlhB compare
Psyr_3287 -1.6 -1.0 DNA topoisomerase I compare
Psyr_1749 -1.6 -5.7 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2138 -1.6 -7.2 Glycosyl transferase, family 2 compare
Psyr_1616 -1.6 -2.0 Rieske [2Fe-2S] region compare
Psyr_4113 -1.6 -4.7 LppC putative lipoprotein compare
Psyr_0562 -1.6 -3.5 OmpA/MotB compare
Psyr_0314 -1.5 -4.6 Flagellar basal body-associated protein FliL compare
Psyr_3299 -1.5 -3.1 two component transcriptional regulator, LuxR family compare
Psyr_4132 -1.5 -6.8 histidinol phosphate aminotransferase apoenzyme compare
Psyr_5043 -1.5 -3.5 Thioesterase superfamily compare
Psyr_4203 -1.5 -1.0 SsrA-binding protein compare
Psyr_0386 -1.5 -3.5 phosphoribosyl-AMP cyclohydrolase compare
Psyr_4134 -1.5 -7.7 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_2088 -1.5 -1.7 2-methylaconitate cis-trans isomerase compare
Psyr_4139 -1.5 -3.3 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_1747 -1.5 -2.7 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4894 -1.5 -3.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_2848 -1.5 -2.6 hypothetical protein compare
Psyr_2870 -1.5 -2.9 CDS compare
Psyr_3867 -1.5 -1.5 hypothetical protein compare
Psyr_3020 -1.5 -0.8 precorrin-4 C11-methyltransferase compare
Psyr_3610 -1.5 -1.2 GAF compare
Psyr_4754 -1.5 -1.7 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3448 -1.5 -4.2 Flagellar basal body-associated protein FliL compare
Psyr_4473 -1.5 -3.7 OmpW compare
Psyr_5029 -1.4 -2.0 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_0270 -1.4 -2.3 DNA polymerase I compare
Psyr_3442 -1.4 -2.9 Flagellar biosynthesis protein FliR compare
Psyr_0179 -1.4 -1.9 Protein of unknown function DUF1289 compare
Psyr_2223 -1.4 -1.4 sarcosine oxidase, delta subunit compare
Psyr_1555 -1.4 -3.3 Cobyrinic acid a,c-diamide synthase compare
Psyr_3289 -1.4 -2.2 3-ketoacyl-CoA thiolase compare
Psyr_4884 -1.4 -3.7 Rhodanese-like protein compare
Psyr_2202 -1.4 -2.0 ABC transporter compare
Psyr_4733 -1.4 -3.6 betaine aldehyde dehydrogenase compare
Psyr_3856 -1.4 -6.1 Helicase c2 compare
Psyr_3179 -1.4 -1.8 DNA translocase FtsK compare
Psyr_2970 -1.4 -1.6 TPR repeat protein:TPR repeat protein compare
Psyr_4100 -1.4 -3.8 D-alanine--D-alanine ligase compare
Psyr_4498 -1.3 -1.7 outer membrane transport energization protein ExbD compare
Psyr_0201 -1.3 -5.6 ATP-dependent DNA helicase RecG compare
Psyr_RNA28 -1.3 -1.2 tRNA-Val compare
Psyr_0534 -1.3 -7.1 membrane protein, putative compare


Specific Phenotypes

For 39 genes in this experiment