Experiment set8IT044 for Marinobacter adhaerens HP15

Compare to:

Glycine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
HP15_p42g17 +2.7 15.6 traN-like protein compare
HP15_3277 +1.3 3.6 diadenosine tetraphosphatase compare
HP15_p42g15 +1.3 4.3 KfrA protein compare
HP15_337 +1.2 1.1 hypothetical protein compare
HP15_2183 +1.2 8.1 DNA-binding ATP-dependent protease La compare
HP15_1490 +1.1 3.6 conserved hypothetical protein compare
HP15_1244 +1.1 2.0 protein containing DUF1289 compare
HP15_273 +1.0 6.4 spermidine synthase compare
HP15_2433 +1.0 1.7 toluene tolerance family protein compare
HP15_1467 +1.0 1.1 fFlagellar basal-body rod protein FlgB compare
HP15_2698 +1.0 1.9 phenylacetate-CoA oxygenase, PaaH subunit compare
HP15_2222 +1.0 6.8 ribonuclease, Rne/Rng family compare
HP15_tRNA50 +0.9 1.9 tRNA-Pro compare
HP15_1881 +0.9 1.8 YcgL domain protein compare
HP15_1895 +0.9 2.4 secreted protein containing PEP-CTERM bacterial domain compare
HP15_1016 +0.9 1.9 acetolactate synthase II, small subunit-like protein compare
HP15_1936 +0.9 1.4 conserved hypothetical protein compare
HP15_1177 +0.8 1.1 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase compare
HP15_228 +0.8 5.6 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
HP15_1639 +0.8 1.8 MarR family transcriptional regulator-like protein compare
HP15_1759 +0.8 1.7 protein containing DUF1285 compare
HP15_1181 +0.8 2.1 hypothetical protein compare
HP15_799 +0.8 1.5 undecaprenyl pyrophosphate phosphatase-like protein compare
HP15_873 +0.8 2.7 conserved hypothetical protein compare
HP15_272 +0.8 5.7 biosynthetic arginine decarboxylase compare
HP15_3585 +0.7 1.8 hypothetical protein compare
HP15_1997 +0.7 2.8 hypothetical protein compare
HP15_538 +0.7 2.5 2-isopropylmalate synthase compare
HP15_1707 +0.7 1.3 short-chain dehydrogenase/reductase SDR compare
HP15_998 +0.7 2.1 conserved hypothetical protein compare
HP15_1940 +0.7 1.3 conserved hypothetical protein compare
HP15_1394 +0.7 2.4 thioesterase superfamily protein compare
HP15_3108 +0.7 0.6 hypothetical protein compare
HP15_421 +0.7 3.0 MSHA pilin protein MshD compare
HP15_1702 +0.7 1.4 protein containing DUF785 compare
HP15_2368 +0.7 3.4 flagellar protein FliS compare
HP15_1770 +0.7 1.6 short-chain dehydrogenase/reductase SDR compare
HP15_293 +0.7 1.2 DNA polymerase I compare
HP15_627 +0.7 1.2 conserved hypothetical protein, membrane compare
HP15_1240 +0.7 1.6 conserved hypothetical protein compare
HP15_1468 +0.7 2.4 flagellar basal-body rod protein FlgC-like protein compare
HP15_p187g15 +0.7 1.4 serine phosphatase RsbU-like protein, regulator of sigma compare
HP15_2701 +0.7 1.6 phenylacetic acid degradation oxidoreductase PaaK compare
HP15_218 +0.7 1.4 conserved hypothetical protein compare
HP15_2442 +0.7 3.0 RNA polymerase, sigma 54 subunit, RpoN compare
HP15_1626 +0.6 0.8 conserved hypothetical protein compare
HP15_2432 +0.6 1.7 NTP binding protein (contains STAS domain) compare
HP15_1222 +0.6 0.8 conserved hypothetical protein, membrane compare
HP15_472 +0.6 2.1 malate dehydrogenase (oxaloacetate-decarboxylating), NADP(+) compare
HP15_915 +0.6 3.4 secreted protein containing sulphatase-modifying factor domain compare
HP15_3577 +0.6 1.5 hypothetical protein compare
HP15_3309 +0.6 3.6 S-adenosylmethionine decarboxylase proenzyme compare
HP15_2311 +0.6 2.4 flagellar biosynthetic protein FliQ compare
HP15_3248 +0.6 1.5 tripartite ATP-independent periplasmic transporter, DctQ component compare
HP15_2472 +0.6 2.9 hypothetical protein compare
HP15_2973 +0.6 2.1 flavoprotein wrbA compare
HP15_2416 +0.6 1.1 zinc-binding protein compare
HP15_1436 +0.6 1.0 protein containing DUF1330 compare
HP15_231 +0.6 0.9 thiamineS compare
HP15_2626 +0.6 3.8 conserved hypothetical protein compare
HP15_1532 +0.6 0.8 transcriptional regulator, GntR family compare
HP15_p187g139 +0.6 1.6 hypothetical protein compare
HP15_1695 +0.6 1.3 protein containing zinc finger, DksA/TraR C4-type domain compare
HP15_755 +0.6 4.0 Mg2+ and Co2+ transporter CorB compare
HP15_1314 +0.6 1.9 DNA polymerase III chi subunit, HolC compare
HP15_938 +0.6 2.1 spermidine/putrescine ABC transporter, permease protein compare
HP15_1627 +0.6 2.1 conserved hypothetical protein compare
HP15_2362 +0.6 2.4 protein containing Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding domain compare
HP15_2071 +0.6 2.1 conserved hypothetical protein compare
HP15_p187g98 +0.6 2.9 hypothetical protein compare
HP15_1530 +0.5 1.4 RNA-binding S4 domain protein compare
HP15_2130 +0.5 0.9 transcriptional regulator, TraR/DksA family compare
HP15_972 +0.5 3.1 hypothetical protein compare
HP15_3344 +0.5 3.9 phosphate transporter family protein compare
HP15_861 +0.5 0.7 cold shock, CspA compare
HP15_3897 +0.5 3.5 conserved hypothetical protein compare
HP15_p187g23 +0.5 1.3 hypothetical protein compare
HP15_4130 +0.5 0.8 molybdopterin-guanine dinucleotide biosynthesis protein A compare
HP15_735 +0.5 1.3 type III effector HopPmaJ compare
HP15_1902 +0.5 1.7 glucose-1-phosphate cytidylyltransferase compare
HP15_1548 +0.5 0.8 chemotaxis protein methyltransferase CheR compare
HP15_674 +0.5 1.5 phage-related packaging protein compare
HP15_335 +0.5 2.2 uncharacterized conserved protein UCP029688, pentapeptide compare
HP15_2700 +0.5 1.1 phenylacetate-CoA oxygenase, PaaJ subunit compare
HP15_3633 +0.5 1.9 protein-S-isoprenylcysteine methyltransferase compare
HP15_866 +0.5 1.5 conserved hypothetical protein, membrane compare
HP15_1223 +0.5 1.4 protein YaaA compare
HP15_2725 +0.5 1.4 conserved hypothetical protein compare
HP15_2330 +0.5 4.2 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_2156 +0.5 1.5 phosphopyruvate hydratase compare
HP15_1699 +0.5 1.7 resolvase compare
HP15_p42g16 +0.5 0.7 conjugal transfer protein TraO compare
HP15_1550 +0.5 0.9 protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family protein compare
HP15_1880 +0.5 3.4 uncharacterized conserved protein UCP006173 compare
HP15_2858 +0.5 1.8 hypothetical protein compare
HP15_2317 +0.5 3.7 flagellar hook-length control protein compare
HP15_871 +0.5 1.3 NLP/P60 family protein compare
HP15_2417 +0.5 0.7 YfaZ family protein compare
HP15_1473 +0.5 2.6 flagellar basal body L-ring protein compare
HP15_1265 +0.5 2.2 conserved hypothetical protein, membrane compare
HP15_212 +0.5 0.7 hypothetical protein compare
HP15_1778 +0.5 1.3 poly(hydroxyalkanoate) granule-associated protein compare
HP15_696 +0.5 2.8 conserved hypothetical protein compare
HP15_1528 +0.5 0.9 chromosome segregation and condensation protein ScpA compare
HP15_2798 +0.5 2.9 protein containing cupin 2, conserved barrel domain compare
HP15_2461 +0.5 1.1 type IV pilus assembly PilZ compare
HP15_2322 +0.5 2.1 flagellar FliJ protein compare
HP15_2002 +0.5 0.7 conserved hypothetical protein compare
HP15_900 +0.5 1.1 hypothetical protein compare
HP15_847 +0.5 1.2 hypothetical protein compare
HP15_2301 +0.5 2.7 response regulator receiver domain protein (CheY-) compare
HP15_1472 +0.5 2.7 flagellar basal-body rod protein FlgG compare
HP15_41 +0.5 1.8 conserved hypothetical protein compare
HP15_1546 +0.5 2.7 flagella basal body P-ring formation protein FlgA compare
HP15_2094 +0.5 1.7 glutathione peroxidase compare
HP15_297 +0.5 1.2 ATPase components of ABC transporters with duplicated ATPase domains compare
HP15_2502 +0.5 0.7 N-acetylmuramoyl-L-alanine amidase-like protein compare
HP15_3622 +0.5 2.0 peroxiredoxin compare
HP15_2659 +0.5 2.3 Citrate uptake transporter, large transmembrane component TctA (from data) compare
HP15_36 +0.5 1.9 protein containing DUF35 compare
HP15_2847 +0.5 1.9 secreted protein containing PEGA domain compare
HP15_2316 +0.5 1.5 flagellar basal body-associated protein FliL compare
HP15_541 +0.5 2.0 peptide chain release factor 3 compare
HP15_623 +0.5 1.2 RNA methyltransferase, TrmH family, group 3 compare
HP15_2663 +0.4 1.7 response regulator receiver and unknown domain protein compare
HP15_1794 +0.4 0.7 secreted protein compare
HP15_16 +0.4 1.3 glyoxalase/bleomycin resistance protein/dioxygenase-like protein compare
HP15_2176 +0.4 2.0 pyruvate kinase II compare
HP15_1793 +0.4 0.3 conserved hypothetical protein compare
HP15_1647 +0.4 0.7 DoxX compare
HP15_1158 +0.4 0.7 SlyX protein compare
HP15_2552 +0.4 1.6 silent information regulator protein Sir2 compare
HP15_597 +0.4 0.9 peptidase S16, lon domain protein compare
HP15_910 +0.4 1.4 3-hydroxyisobutyrate dehydrogenase compare
HP15_3531 +0.4 0.6 hypothetical protein compare
HP15_2324 +0.4 3.2 flagellar assembly protein H compare
HP15_1124 +0.4 1.9 conserved hypothetical protein compare
HP15_1812 +0.4 1.1 type IV pilus assembly PilZ compare
HP15_550 +0.4 1.4 phosphoheptose isomerase compare
HP15_73 +0.4 2.3 hypothetical protein compare
HP15_1631 +0.4 2.2 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) compare
HP15_164 +0.4 1.5 conserved hypothetical protein compare
HP15_2528 +0.4 0.5 hypothetical protein compare
HP15_1477 +0.4 3.1 flagellar hook-associated protein FlgL compare
HP15_3256 +0.4 0.7 phospho-2-dehydro-3-heoxyheptonate aldolase compare
HP15_2641 +0.4 1.5 conserved hypothetical protein compare
HP15_2313 +0.4 1.8 flagellar biosynthesis protein, FliO compare
HP15_892 +0.4 1.1 uncharacterized conserved protein UCP029543 compare
HP15_1209 +0.4 1.3 glycosyltransferase involved in cell wall biogenesis compare
HP15_2371 +0.4 2.4 flagellin FliC compare
HP15_p187g52 +0.4 2.1 hypothetical protein compare
HP15_4117 +0.4 0.9 membrane or secreted protein compare
HP15_1252 +0.4 0.7 small component of pyruvate transporter (TIGR03647) (from data) compare
HP15_2638 +0.4 0.5 hypothetical protein compare
HP15_968 +0.4 1.4 hypothetical protein compare
HP15_p42g21 +0.4 1.3 oriT binding protein TraJ compare
HP15_2321 +0.4 1.0 anti-sigma-factor antagonist compare
HP15_2533 +0.4 2.4 conserved hypothetical protein, secreted compare
HP15_800 +0.4 1.4 protein YhiQ compare
HP15_3994 +0.4 2.0 alternate ATPase, F0 complex, subunit C compare
HP15_2867 +0.4 1.2 HypX compare
HP15_1457 +0.4 0.9 HAD-superfamily subfamily IB, PSPase-like protein compare
HP15_1867 +0.4 1.6 biopolymer transport protein compare
HP15_2326 +0.4 3.1 flagellar MS-ring protein compare
HP15_3603 +0.4 1.5 transcriptional regulator, HxlR family compare
HP15_643 +0.4 1.6 transmembrane pair domain protein compare
HP15_3278 +0.4 1.9 dimethyladenosine transferase compare
HP15_2081 +0.4 1.2 ATP-dependent Clp protease adaptor protein ClpS compare
HP15_2369 +0.4 3.0 flagellar hook-associated 2 domain protein compare
HP15_409 +0.4 1.9 hypothetical biogenesis protein MshI-like protein compare
HP15_2592 +0.4 1.3 multiple resistance and pH regulation protein F compare
HP15_542 +0.4 1.5 TatD-related deoxyribonuclease compare
HP15_736 +0.4 0.8 protein containing DUF1244 compare
HP15_2445 +0.4 1.1 protein yhbJ compare
HP15_1284 +0.4 0.8 conserved hypothetical protein, secreted compare
HP15_1157 +0.4 1.8 cold-shock DNA-binding domain protein compare
HP15_1658 +0.4 0.6 glutaredoxin-like protein compare
HP15_1382 +0.4 1.6 M18-family aminopeptidase 2 compare
HP15_221 +0.4 1.4 anti-RNA polymerase sigma 70 factor compare
HP15_2312 +0.4 2.3 flagellar biosynthesis protein FliP compare
HP15_2305 +0.4 3.4 flagellar biosynthesis protein A compare
HP15_594 +0.4 1.7 peptidoglycan-binding domain 1 protein-like protein compare
HP15_2882 +0.4 0.9 hypothetical protein compare
HP15_655 +0.4 1.1 phage tail collar domain protein-like protein compare
HP15_328 +0.4 0.5 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_794 +0.4 1.7 conserved hypothetical protein compare
HP15_1470 +0.4 3.1 flagellar hook protein FlgE compare
HP15_3547 +0.4 1.3 hypothetical protein compare
HP15_1474 +0.4 2.7 flagellar P-ring protein precursor I compare
HP15_3140 +0.4 1.7 pyrroloquinoline quinone biosynthesis protein PqqB compare
HP15_3638 +0.4 2.0 antibiotic biosynthesis monooxygenase domain protein compare
HP15_902 +0.4 1.1 hypothetical protein compare
HP15_356 +0.4 0.3 anhydro-N-acetylmuramic acid kinase compare
HP15_429 +0.4 2.0 GTP-binding protein TypA compare
HP15_2309 +0.4 2.3 flagellar biosynthesis protein FlhB compare
HP15_2001 +0.4 2.0 hypothetical protein compare
HP15_1659 +0.4 1.3 hypothetical protein compare
HP15_111 +0.4 1.0 nitrogen regulatory protein PII-like protein compare
HP15_2780 +0.4 1.1 monofunctional biosynthetic peptidoglycan transglycosylase compare
HP15_1544 +0.4 1.9 flagella synthesis protein FlgN compare


Specific Phenotypes

None in this experiment

For Marinobacter adhaerens HP15 in nitrogen source experiments

For nitrogen source Glycine across organisms