Experiment set8IT043 for Pseudomonas fluorescens FW300-N2E2

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Trisodium citrate dihydrate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_4138 -3.2 -16.5 Uncharacterized transporter, similarity to citrate transporter conserved
Pf6N2E2_3160 -2.9 -10.3 Multicopper oxidase conserved
Pf6N2E2_5618 -2.7 -11.3 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites conserved
Pf6N2E2_4447 -2.5 -14.0 Cytochrome c family protein compare
Pf6N2E2_2853 -2.5 -10.3 Iron-regulated protein A precursor conserved
Pf6N2E2_5616 -2.4 -5.3 outer membrane component of uptake system, probably for ferrous iron (from data) conserved
Pf6N2E2_2833 -2.3 -7.0 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) compare
Pf6N2E2_2834 -2.2 -6.0 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) compare
Pf6N2E2_5617 -2.2 -8.6 Iron-regulated protein A precursor compare
Pf6N2E2_5305 -1.8 -13.1 Fe(3+) dicitrate transport protein FecA (from data) conserved
Pf6N2E2_5307 -1.8 -5.2 FIG006045: Sigma factor, ECF subfamily conserved
Pf6N2E2_2839 -1.7 -10.1 Pca regulon regulatory protein PcaR compare
Pf6N2E2_2914 -1.5 -8.0 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) (from data) compare
Pf6N2E2_2913 -1.5 -6.8 Transcriptional regulator PobR, AraC family compare
Pf6N2E2_2837 -1.5 -7.2 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6); Glutaconate CoA-transferase subunit A (EC 2.8.3.12) compare
Pf6N2E2_2838 -1.3 -6.8 4-hydroxybenzoate transporter compare
Pf6N2E2_2769 +1.4 7.4 Tricarboxylate transport protein TctB conserved
Pf6N2E2_2770 +1.7 14.4 Tricarboxylate transport membrane protein TctA conserved


Specific phenotypes for carbon source Trisodium citrate dihydrate across organisms