Experiment set8IT043 for Pseudomonas syringae pv. syringae B728a

Compare to:

library passed through aphids in food, 24 hours

200 most important genes:

  gene name fitness t score description  
Psyr_1668 -3.9 -11.2 amidophosphoribosyltransferase compare
Psyr_4407 -3.3 -4.4 phosphoribosylamine--glycine ligase compare
Psyr_3462 -3.0 -4.6 conserved hypothetical protein compare
Psyr_4270 -2.8 -7.6 serine hydroxymethyltransferase compare
Psyr_3445 -2.6 -6.2 Flagellar biosynthesis protein, FliO compare
Psyr_3690 -2.0 -6.3 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_3457 -1.9 -6.3 Flagellar FliF M-ring protein compare
Psyr_4991 -1.9 -2.7 hypothetical protein compare
Psyr_1269 -1.9 -4.6 phosphoribosylformylglycinamidine synthase compare
Psyr_3481 -1.8 -7.0 Flagellar basal-body rod protein FlgB compare
Psyr_3453 -1.8 -7.3 flagellar protein FliJ, putative compare
Psyr_3480 -1.7 -4.0 Flagellar basal-body rod protein FlgC compare
Psyr_0487 -1.7 -4.3 glutathione synthase compare
Psyr_3446 -1.7 -2.9 Surface presentation of antigens (SPOA) protein compare
Psyr_3473 -1.7 -2.7 Flagellar P-ring protein compare
Psyr_3475 -1.6 -4.0 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3447 -1.6 -5.9 Flagellar motor switch protein FliM compare
Psyr_3439 -1.6 -5.6 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3437 -1.6 -11.0 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG compare
Psyr_3478 -1.6 -10.6 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE compare
Psyr_0255 -1.6 -2.5 glutamate-cysteine ligase compare
Psyr_0378 -1.6 -7.6 Glycosyl transferase, family 2 compare
Psyr_3449 -1.5 -5.4 Flagellar hook-length control protein compare
Psyr_4622 -1.5 -5.8 Nucleotidyl transferase compare
Psyr_0574 -1.5 -4.4 protease FtsH subunit HflK compare
Psyr_1378 -1.5 -2.8 RecA protein compare
Psyr_3020 -1.5 -3.3 precorrin-4 C11-methyltransferase compare
Psyr_3487 -1.5 -7.9 flagellar protein FlgA compare
Psyr_3489 -1.5 -4.9 FlgN compare
Psyr_3456 -1.5 -7.4 Flagellar motor switch protein FliG compare
Psyr_3454 -1.5 -8.8 ATPase FliI/YscN compare
Psyr_4203 -1.5 -1.6 SsrA-binding protein compare
Psyr_0377 -1.5 -6.4 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3464 -1.5 -8.1 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN compare
Psyr_3472 -1.4 -8.2 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase compare
Psyr_1613 -1.4 -1.4 septum site-determining protein MinC compare
Psyr_3471 -1.4 -9.3 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3432 -1.4 -2.6 MotA/TolQ/ExbB proton channel compare
Psyr_0565 -1.4 -5.1 Protein of unknown function UPF0126 compare
Psyr_3474 -1.4 -9.1 Flagellar L-ring protein compare
Psyr_0215 -1.4 -7.8 Exodeoxyribonuclease III xth compare
Psyr_3440 -1.4 -7.2 Flagellar biosynthesis protein FlhA compare
Psyr_3441 -1.4 -9.5 Flagellar biosynthetic protein FlhB compare
Psyr_3461 -1.4 -8.4 Helix-turn-helix, Fis-type compare
Psyr_4882 -1.4 -7.0 protein translocase subunit secB compare
Psyr_0402 -1.4 -10.7 Peptidoglycan glycosyltransferase compare
Psyr_3470 -1.3 -10.0 Flagellin, N-terminal compare
Psyr_3455 -1.3 -5.3 Flagellar assembly protein FliH compare
Psyr_3443 -1.3 -4.9 Flagellar biosynthesis protein FliQ compare
Psyr_1140 -1.3 -3.6 Disulfide bond formation protein DsbB compare
Psyr_4567 -1.3 -4.4 Protein of unknown function UPF0075 compare
Psyr_3442 -1.3 -5.8 Flagellar biosynthesis protein FliR compare
Psyr_3893 -1.3 -7.2 OmpA/MotB compare
Psyr_3431 -1.3 -5.5 OmpA/MotB compare
Psyr_3428 -1.3 -5.5 CheW-like protein compare
Psyr_3463 -1.3 -4.1 Flagellar protein FliS compare
Psyr_3466 -1.2 -2.3 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_4623 -1.2 -8.5 Aminoglycoside phosphotransferase compare
Psyr_0268 -1.2 -2.9 DSBA oxidoreductase compare
Psyr_1247 -1.2 -1.8 conserved hypothetical protein compare
Psyr_3434 -1.1 -5.0 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt compare
Psyr_3485 -1.1 -6.3 MCP methyltransferase, CheR-type compare
Psyr_3469 -1.1 -7.8 Glycosyl transferase, family 2 compare
Psyr_4194 -1.1 -3.3 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_5132 -1.1 -2.5 Glucose-inhibited division protein A subfamily compare
Psyr_4754 -1.1 -2.8 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3906 -1.1 -1.1 regulatory protein, DeoR compare
Psyr_3199 -1.1 -2.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0014 -1.1 -3.4 lipid A biosynthesis acyltransferase compare
Psyr_3436 -1.1 -4.4 Response regulator receiver compare
Psyr_3193 -1.1 -2.2 Transcription factor jumonji, jmjC compare
Psyr_2973 -1.0 -2.7 Glyoxalase I compare
Psyr_3433 -1.0 -3.1 Protein-glutamate methylesterase compare
Psyr_5133 -1.0 -2.7 tRNA modification GTPase trmE compare
Psyr_3644 -1.0 -3.1 prephenate dehydrogenase compare
Psyr_1670 -1.0 -1.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_2223 -1.0 -1.5 sarcosine oxidase, delta subunit compare
Psyr_1633 -1.0 -2.3 MotA/TolQ/ExbB proton channel compare
Psyr_0826 -1.0 -5.2 glucose-6-phosphate isomerase compare
Psyr_3296 -1.0 -2.3 MOSC:MOSC, N-terminal beta barrel compare
Psyr_2446 -1.0 -4.1 MCP methyltransferase, CheR-type compare
Psyr_3755 -1.0 -1.0 conserved hypothetical protein compare
Psyr_0579 -1.0 -6.2 RNAse R compare
Psyr_4115 -1.0 -2.4 phosphoheptose isomerase compare
Psyr_4880 -0.9 -4.4 conserved hypothetical protein compare
Psyr_3458 -0.9 -2.8 Flagellar hook-basal body complex protein FliE compare
Psyr_2347 -0.9 -1.9 hypothetical protein compare
Psyr_3298 -0.9 -2.6 conserved hypothetical protein compare
Psyr_0822 -0.9 -1.8 1-phosphofructokinase compare
Psyr_3429 -0.9 -1.7 CheW-like protein compare
Psyr_3620 -0.9 -1.9 hypothetical protein compare
Psyr_4473 -0.9 -4.4 OmpW compare
Psyr_1973 -0.9 -2.7 Aspartate transaminase compare
Psyr_4078 -0.9 -6.7 AmpG-related permease compare
Psyr_4158 -0.8 -5.5 conserved hypothetical protein compare
Psyr_3226 -0.8 -3.3 Transcriptional activator RfaH compare
Psyr_4464 -0.8 -1.4 lipoprotein, putative compare
Psyr_3435 -0.8 -3.8 chemotaxis phosphatase, CheZ compare
Psyr_RNA61 -0.8 -2.1 tRNA-Gly compare
Psyr_1816 -0.8 -2.5 transcriptional regulator, GntR family compare
Psyr_5067 -0.8 -3.7 conserved hypothetical protein compare
Psyr_4627 -0.8 -1.7 dimethyladenosine transferase compare
Psyr_RNA28 -0.8 -1.2 tRNA-Val compare
Psyr_4733 -0.8 -4.8 betaine aldehyde dehydrogenase compare
Psyr_3419 -0.8 -2.5 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_3691 -0.8 -4.2 conserved hypothetical protein compare
Psyr_3688 -0.8 -1.3 conserved hypothetical protein compare
Psyr_1661 -0.8 -5.8 conserved hypothetical protein compare
Psyr_2449 -0.8 -2.1 Response regulator receiver compare
Psyr_0291 -0.7 -3.5 DedA compare
Psyr_2820 -0.7 -2.0 RecT protein compare
Psyr_2752 -0.7 -2.2 conserved hypothetical protein compare
Psyr_2980 -0.7 -1.7 UDP-glucose pyrophosphorylase compare
Psyr_0849 -0.7 -2.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2875 -0.7 -2.7 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_4420 -0.7 -2.5 precorrin-6A reductase compare
Psyr_3448 -0.7 -3.7 Flagellar basal body-associated protein FliL compare
Psyr_3281 -0.7 -1.7 Glycoside hydrolase, family 3, N-terminal compare
Psyr_3476 -0.7 -1.0 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_1751 -0.7 -2.3 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4460 -0.7 -1.5 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0575 -0.7 -1.7 protease FtsH subunit HflC compare
Psyr_3262 -0.7 -1.7 dnaK suppressor protein, putative compare
Psyr_4566 -0.7 -4.6 Peptidase M23B compare
Psyr_1374 -0.7 -4.5 RNA polymerase, sigma 38 subunit, RpoS compare
Psyr_4144 -0.7 -1.4 Protein of unknown function DUF1239 compare
Psyr_2462 -0.7 -2.4 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2464 -0.6 -3.8 methionine synthase (B12-dependent) compare
Psyr_1250 -0.6 -1.6 conserved hypothetical protein compare
Psyr_1044 -0.6 -4.2 transcriptional regulator, LysR family compare
Psyr_3142 -0.6 -1.6 general secretion pathway protein N, putative compare
Psyr_4512 -0.6 -2.7 putative phage-related protein compare
Psyr_3934 -0.6 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_0486 -0.6 -4.6 TonB, C-terminal compare
Psyr_4920 -0.6 -1.2 conserved hypothetical bacteriophage protein compare
Psyr_1389 -0.6 -2.0 Protein of unknown function DUF1456 compare
Psyr_0278 -0.6 -3.9 ABC-3 compare
Psyr_4852 -0.6 -4.4 D-3-phosphoglycerate dehydrogenase compare
Psyr_1217 -0.6 -1.8 Sigma-70 region 2:Sigma-70 region 4 compare
Psyr_2226 -0.6 -2.8 formyltetrahydrofolate deformylase compare
Psyr_0406 -0.6 -2.0 Pilus assembly protein, PilQ compare
Psyr_1198 -0.6 -1.9 type III secretion protein HrpF compare
Psyr_1111 -0.6 -1.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2339 -0.6 -1.6 hypothetical protein compare
Psyr_2733 -0.6 -1.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_3479 -0.6 -2.0 Flagellar hook capping protein compare
Psyr_4418 -0.6 -2.0 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_3611 -0.6 -2.6 Protein of unknown function DUF815 compare
Psyr_3460 -0.6 -2.9 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_3808 -0.6 -0.7 hypothetical protein compare
Psyr_0982 -0.6 -2.8 conserved hypothetical protein compare
Psyr_3028 -0.6 -1.7 Protein of unknown function DUF28 compare
Psyr_3728 -0.6 -2.3 hypothetical protein compare
Psyr_1008 -0.6 -1.9 conserved hypothetical protein compare
Psyr_3680 -0.6 -2.7 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_3427 -0.6 -1.6 conserved hypothetical protein compare
Psyr_2137 -0.6 -2.1 molybdopterin molybdochelatase compare
Psyr_1843 -0.6 -1.4 Protein of unknown function DUF1311 compare
Psyr_2824 -0.6 -2.6 conserved hypothetical protein compare
Psyr_1401 -0.6 -2.5 Histidine triad (HIT) protein compare
Psyr_4057 -0.6 -2.0 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_2636 -0.6 -2.8 TspO/MBR-related protein compare
Psyr_3678 -0.6 -3.0 adenosylcobinamide-phosphate synthase compare
Psyr_2067 -0.6 -1.6 ABC transporter compare
Psyr_1747 -0.6 -1.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1946 -0.6 -1.6 diaminobutyrate aminotransferase apoenzyme compare
Psyr_4138 -0.6 -1.9 Toluene tolerance compare
Psyr_4480 -0.6 -0.9 outer membrane transport energization protein TonB compare
Psyr_0025 -0.6 -1.2 shikimate dehydrogenase compare
Psyr_4884 -0.5 -2.8 Rhodanese-like protein compare
Psyr_3675 -0.5 -2.0 adenosylcobinamide kinase compare
Psyr_3287 -0.5 -0.8 DNA topoisomerase I compare
Psyr_3701 -0.5 -1.6 thioredoxin, putative compare
Psyr_3293 -0.5 -1.1 UspA compare
Psyr_2312 -0.5 -1.0 Protein of unknown function DUF24 compare
Psyr_0561 -0.5 -3.6 chemotaxis motA protein compare
Psyr_2441 -0.5 -2.1 transcriptional regulator, AraC family compare
Psyr_1275 -0.5 -2.1 Protein of unknown function DUF1289 compare
Psyr_3841 -0.5 -1.8 conserved hypothetical protein compare
Psyr_3609 -0.5 -3.1 conserved hypothetical protein compare
Psyr_4089 -0.5 -2.3 PAS compare
Psyr_0882 -0.5 -3.1 conserved hypothetical protein compare
Psyr_0410 -0.5 -4.0 conserved hypothetical protein compare
Psyr_1811 -0.5 -2.2 transcriptional regulator, GntR family compare
Psyr_4087 -0.5 -1.4 Protein of unknown function DUF520 compare
Psyr_3681 -0.5 -1.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_2088 -0.5 -1.6 2-methylaconitate cis-trans isomerase compare
Psyr_3826 -0.5 -2.3 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_3324 -0.5 -1.9 transcriptional regulator, TetR family compare
Psyr_0576 -0.5 -2.2 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_3974 -0.5 -2.2 ABC transporter compare
Psyr_4732 -0.5 -4.2 choline dehydrogenase compare
Psyr_3135 -0.5 -1.3 transcriptional regulator, GntR family compare
Psyr_4113 -0.5 -3.6 LppC putative lipoprotein compare
Psyr_0525 -0.5 -2.5 Lipopolysaccharide kinase compare
Psyr_2809 -0.5 -2.0 hypothetical protein compare
Psyr_1097 -0.5 -0.9 glycine cleavage system H protein compare
Psyr_2453 -0.5 -2.0 NUDIX hydrolase compare
Psyr_0051 -0.5 -1.9 conserved hypothetical protein compare
Psyr_2690 -0.5 -2.4 Glycosyl transferase, family 2 compare


Specific Phenotypes

For 20 genes in this experiment