Experiment set8IT042 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS21475 -9.4 -6.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS20895 -8.2 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS02995 -8.2 -8.0 aspartate carbamoyltransferase compare
BWI76_RS04465 -7.9 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23920 -7.3 -7.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20355 -7.2 -5.2 colicin V production protein compare
BWI76_RS11965 -7.2 -5.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18950 -7.2 -6.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS01615 -7.0 -10.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18940 -7.0 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23360 -6.9 -4.7 diaminopimelate decarboxylase compare
BWI76_RS07070 -6.5 -6.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18930 -6.3 -4.3 histidinol-phosphate transaminase compare
BWI76_RS21265 -6.3 -12.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04470 -6.1 -11.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS18920 -6.0 -5.7 ATP phosphoribosyltransferase compare
BWI76_RS01610 -5.7 -7.9 phosphoribosylamine--glycine ligase compare
BWI76_RS04160 -5.6 -7.2 phosphoserine phosphatase compare
BWI76_RS20965 -5.4 -3.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08385 -5.2 -6.1 citrate (Si)-synthase compare
BWI76_RS04645 -5.2 -5.2 3-dehydroquinase compare
BWI76_RS10990 -5.2 -5.0 dihydroorotase compare
BWI76_RS09910 -5.1 -16.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS09755 -5.1 -9.0 phosphoserine transaminase compare
BWI76_RS27385 -5.0 -7.2 orotate phosphoribosyltransferase compare
BWI76_RS00990 -4.9 -12.7 ketol-acid reductoisomerase compare
BWI76_RS05835 -4.9 -3.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS00835 -4.8 -16.3 phosphoenolpyruvate carboxylase compare
BWI76_RS00400 -4.8 -3.3 glutamine synthetase compare
BWI76_RS25645 -4.7 -7.9 shikimate dehydrogenase compare
BWI76_RS22765 -4.7 -16.5 sulfite reductase subunit alpha compare
BWI76_RS04250 -4.7 -6.4 homoserine kinase compare
BWI76_RS20350 -4.7 -6.6 amidophosphoribosyltransferase compare
BWI76_RS26085 -4.6 -3.7 3-dehydroquinate synthase compare
BWI76_RS22755 -4.6 -9.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS07065 -4.5 -6.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05840 -4.5 -6.0 glutamate 5-kinase compare
BWI76_RS00855 -4.5 -10.7 argininosuccinate lyase compare
BWI76_RS23365 -4.3 -4.8 LysR family transcriptional regulator compare
BWI76_RS04255 -4.2 -7.2 threonine synthase compare
BWI76_RS23240 -4.2 -2.9 exonuclease V subunit gamma compare
BWI76_RS09760 -4.0 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20435 -4.0 -2.4 chorismate synthase compare
BWI76_RS18935 -4.0 -8.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00785 -3.8 -9.6 cystathionine gamma-synthase compare
BWI76_RS00975 -3.8 -10.2 dihydroxy-acid dehydratase compare
BWI76_RS04670 -3.8 -9.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00845 -3.8 -9.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22760 -3.8 -7.5 sulfite reductase subunit beta compare
BWI76_RS00965 -3.6 -2.2 acetolactate synthase 2 small subunit compare
BWI76_RS18925 -3.6 -8.6 histidinol dehydrogenase compare
BWI76_RS00805 -3.5 -6.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS23220 -3.5 -5.8 amino-acid N-acetyltransferase compare
BWI76_RS03010 -3.5 -8.1 ornithine carbamoyltransferase compare
BWI76_RS04245 -3.5 -14.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04675 -3.5 -6.3 3-isopropylmalate dehydrogenase compare
BWI76_RS00850 -3.5 -12.1 acetylglutamate kinase compare
BWI76_RS02735 -3.5 -5.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS01800 -3.4 -4.5 glucose-6-phosphate isomerase compare
BWI76_RS25115 -3.4 -7.5 argininosuccinate synthase compare
BWI76_RS01655 -3.3 -12.3 homoserine O-succinyltransferase compare
BWI76_RS04665 -3.3 -18.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS27390 -3.3 -3.0 ribonuclease PH compare
BWI76_RS18955 -3.1 -6.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11840 -3.1 -6.3 tryptophan synthase subunit alpha compare
BWI76_RS01200 -3.1 -3.4 diaminopimelate epimerase compare
BWI76_RS23230 -3.0 -2.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS04240 -2.9 -2.5 thr operon leader peptide compare
BWI76_RS26000 -2.9 -6.6 aspartate aminotransferase family protein compare
BWI76_RS09645 -2.8 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS11845 -2.8 -5.3 tryptophan synthase subunit beta compare
BWI76_RS00980 -2.8 -11.2 PLP-dependent threonine dehydratase compare
BWI76_RS21465 -2.7 -4.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS02410 -2.5 -2.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS21480 -2.3 -6.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS04680 -2.3 -8.9 2-isopropylmalate synthase compare
BWI76_RS22690 -2.2 -1.7 adenylyl-sulfate kinase compare
BWI76_RS04685 -2.2 -5.4 putative leucine operon leader peptide compare
BWI76_RS24285 -2.1 -6.9 cystathionine beta-lyase compare
BWI76_RS20650 -2.1 -2.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26055 -2.0 -7.1 siroheme synthase compare
BWI76_RS11850 -2.0 -6.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11855 -2.0 -5.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11860 -1.9 -7.3 anthranilate synthase component I compare
BWI76_RS00985 -1.9 -4.6 transcriptional regulator IlvY compare
BWI76_RS22805 -1.7 -8.3 GTP diphosphokinase compare
BWI76_RS20440 -1.6 -1.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS16485 -1.6 -2.0 ribonuclease T compare
BWI76_RS09655 -1.6 -3.9 leucine-responsive regulatory protein compare
BWI76_RS15215 -1.5 -1.5 N-acetyltransferase compare
BWI76_RS09660 -1.5 -1.7 DNA translocase FtsK compare
BWI76_RS26570 -1.4 -3.1 anion permease compare
BWI76_RS22700 -1.4 -2.7 sulfate adenylyltransferase subunit 2 compare
BWI76_RS15850 -1.4 -1.1 DUF1317 domain-containing protein compare
BWI76_RS01325 -1.3 -3.0 twin-arginine translocase subunit TatB compare
BWI76_RS00960 -1.3 -3.5 acetolactate synthase 2 catalytic subunit compare
BWI76_RS20640 -1.3 -3.2 cysteine synthase A compare
BWI76_RS25065 -1.2 -2.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01210 -1.2 -2.2 tyrosine recombinase XerC compare
BWI76_RS21070 -1.2 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS16275 -1.2 -2.3 fumarate hydratase FumA compare
BWI76_RS00390 -1.2 -2.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS13480 -1.2 -1.6 XRE family transcriptional regulator compare
BWI76_RS19700 -1.2 -2.7 deoxyribonuclease IV compare
BWI76_RS15830 -1.1 -3.3 hypothetical protein compare
BWI76_RS21370 -1.1 -1.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS00385 -1.1 -5.3 nitrogen assimilation regulatory protein compare
BWI76_RS22695 -1.1 -4.9 sulfate adenylyltransferase compare
BWI76_RS01275 -1.0 -5.0 LysR family transcriptional regulator compare
BWI76_RS25335 -1.0 -2.5 stringent starvation protein A compare
BWI76_RS08380 -1.0 -1.5 endonuclease VIII compare
BWI76_RS21140 -1.0 -1.7 molecular chaperone HscA compare
BWI76_RS08210 -1.0 -1.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS05200 -1.0 -2.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS13545 -1.0 -1.3 N-acetyltransferase compare
BWI76_RS05260 -1.0 -1.6 chaperone compare
BWI76_RS07185 -1.0 -1.8 hypothetical protein compare
BWI76_RS17190 -1.0 -2.6 TonB system transport protein TonB compare
BWI76_RS21165 -1.0 -1.6 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS27820 -1.0 -1.3 ilvB operon leader peptide IvbL compare
BWI76_RS25070 -1.0 -1.6 hypothetical protein compare
BWI76_RS23265 -0.9 -2.8 hypothetical protein compare
BWI76_RS15840 -0.9 -2.1 prophage protein compare
BWI76_RS23480 -0.9 -5.7 EAL domain-containing protein compare
BWI76_RS11170 -0.9 -1.2 hypothetical protein compare
BWI76_RS10935 -0.9 -3.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21235 -0.9 -1.3 hypothetical protein compare
BWI76_RS04510 -0.9 -1.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01890 -0.9 -2.9 transcriptional regulator Zur compare
BWI76_RS06525 -0.8 -3.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS13245 -0.8 -1.6 DNA-damage-inducible protein I compare
BWI76_RS20750 -0.8 -1.0 carboxysome structural protein EutK compare
BWI76_RS20970 -0.8 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS00345 -0.8 -1.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS25285 -0.8 -1.2 HPr family phosphocarrier protein compare
BWI76_RS15350 -0.8 -1.1 hypothetical protein compare
BWI76_RS13435 -0.8 -1.3 hypothetical protein compare
BWI76_RS17110 -0.8 -1.4 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS09970 -0.8 -1.3 porin OmpA compare
BWI76_RS12985 -0.8 -1.3 transcriptional regulator compare
BWI76_RS11130 -0.8 -3.7 PTS glucose transporter subunit IIBC compare
BWI76_RS04305 -0.8 -0.9 molecular chaperone DnaJ compare
BWI76_RS10835 -0.8 -1.3 hypothetical protein compare
BWI76_RS08840 -0.8 -1.1 hypothetical protein compare
BWI76_RS07725 -0.8 -1.0 iron-enterobactin transporter permease compare
BWI76_RS10500 -0.8 -1.8 flavoprotein monooxygenase compare
BWI76_RS20995 -0.7 -3.7 RNA degradosome polyphosphate kinase compare
BWI76_RS18065 -0.7 -1.3 DNA polymerase III subunit theta compare
BWI76_RS02725 -0.7 -0.9 HxlR family transcriptional regulator compare
BWI76_RS14075 -0.7 -1.1 TetR family transcriptional regulator compare
BWI76_RS16090 -0.7 -1.1 two-component system response regulator DcuR compare
BWI76_RS06015 -0.7 -1.3 hypothetical protein compare
BWI76_RS25425 -0.7 -1.3 arginine repressor compare
BWI76_RS25920 -0.7 -0.9 peptidylprolyl isomerase compare
BWI76_RS18580 -0.7 -1.1 hypothetical protein compare
BWI76_RS13955 -0.7 -1.7 hypothetical protein compare
BWI76_RS11235 -0.7 -0.9 hypothetical protein compare
BWI76_RS18770 -0.7 -0.9 DNA gyrase inhibitor compare
BWI76_RS16500 -0.7 -1.5 superoxide dismutase [Fe] compare
BWI76_RS00180 -0.7 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS24925 -0.7 -2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS14050 -0.7 -1.6 AP endonuclease, family 2 compare
BWI76_RS01350 -0.7 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS16955 -0.7 -0.9 hypothetical protein compare
BWI76_RS09870 -0.6 -2.8 aromatic amino acid aminotransferase compare
BWI76_RS17235 -0.6 -2.6 peptide ABC transporter permease compare
BWI76_RS17400 -0.6 -0.9 transporter compare
BWI76_RS15945 -0.6 -2.0 voltage-gated ClC-type chloride channel ClcB compare
BWI76_RS13895 -0.6 -1.8 LysR family transcriptional regulator compare
BWI76_RS07550 -0.6 -3.6 Zn-dependent hydrolase compare
BWI76_RS18140 -0.6 -2.3 zinc ABC transporter permease compare
BWI76_RS21375 -0.6 -0.9 autonomous glycyl radical cofactor GrcA compare
BWI76_RS14935 -0.6 -0.8 NIPSNAP family containing protein compare
BWI76_RS16870 -0.6 -2.0 LysR family transcriptional regulator compare
BWI76_RS16000 -0.6 -0.9 multidrug transporter subunit MdtI compare
BWI76_RS05895 -0.6 -2.1 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS20150 -0.6 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS01165 -0.6 -2.6 protoheme IX biogenesis protein HemY compare
BWI76_RS24100 -0.6 -1.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS27915 -0.6 -1.4 YceK/YidQ family lipoprotein compare
BWI76_RS21470 -0.6 -1.9 gluconolaconase compare
BWI76_RS05165 -0.6 -2.0 cobalamin-binding protein compare
BWI76_RS26095 -0.6 -1.0 shikimate kinase compare
BWI76_RS02225 -0.6 -2.1 phosphonate C-P lyase system protein PhnG compare
BWI76_RS11580 -0.6 -1.5 L-asparaginase 1 compare
BWI76_RS11410 -0.6 -1.4 leucine efflux protein compare
BWI76_RS18165 -0.6 -0.8 NUDIX pyrophosphatase compare
BWI76_RS12195 -0.6 -1.6 hypothetical protein compare
BWI76_RS26300 -0.6 -1.8 glycerol-3-phosphate transporter permease compare
BWI76_RS13755 -0.6 -1.0 hypothetical protein compare
BWI76_RS01940 -0.6 -2.2 hypothetical protein compare
BWI76_RS05640 -0.6 -2.1 GntR family transcriptional regulator compare
BWI76_RS10450 -0.6 -2.6 tRNA-Tyr compare
BWI76_RS01685 -0.6 -3.8 methionine synthase compare
BWI76_RS13125 -0.6 -1.8 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS24965 -0.6 -1.2 SCP2 domain-containing protein compare
BWI76_RS26175 -0.6 -2.5 DeoR/GlpR family transcriptional regulator compare
BWI76_RS27440 -0.6 -2.2 DNA helicase RecG compare
BWI76_RS11030 -0.6 -2.0 MFS transporter compare
BWI76_RS23915 -0.6 -1.4 5-formyltetrahydrofolate cyclo-ligase compare


Specific Phenotypes

For 2 genes in this experiment

For exudates Brachypodium distachyon 13-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 13-day exudates across organisms