Experiment set8IT040 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS11965 -7.3 -5.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23360 -6.9 -4.8 diaminopimelate decarboxylase compare
BWI76_RS09645 -6.6 -2.9 thioredoxin-disulfide reductase compare
BWI76_RS20350 -6.4 -5.9 amidophosphoribosyltransferase compare
BWI76_RS21265 -6.4 -14.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04470 -6.2 -12.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS01615 -6.1 -12.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09755 -6.0 -9.6 phosphoserine transaminase compare
BWI76_RS20895 -5.9 -6.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20965 -5.9 -6.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS27385 -5.7 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS02995 -5.7 -7.2 aspartate carbamoyltransferase compare
BWI76_RS23920 -5.7 -6.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04465 -5.5 -6.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04160 -5.5 -6.8 phosphoserine phosphatase compare
BWI76_RS09910 -5.4 -17.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00835 -5.2 -13.2 phosphoenolpyruvate carboxylase compare
BWI76_RS00990 -5.2 -7.9 ketol-acid reductoisomerase compare
BWI76_RS25645 -5.2 -10.0 shikimate dehydrogenase compare
BWI76_RS04645 -5.0 -5.0 3-dehydroquinase compare
BWI76_RS22755 -4.9 -10.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18925 -4.9 -8.8 histidinol dehydrogenase compare
BWI76_RS18920 -4.9 -3.9 ATP phosphoribosyltransferase compare
BWI76_RS00400 -4.8 -3.3 glutamine synthetase compare
BWI76_RS15660 -4.8 -2.1 hypothetical protein compare
BWI76_RS21475 -4.7 -8.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18935 -4.7 -9.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS07065 -4.7 -8.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18930 -4.7 -7.8 histidinol-phosphate transaminase compare
BWI76_RS26085 -4.7 -3.4 3-dehydroquinate synthase compare
BWI76_RS04255 -4.5 -11.4 threonine synthase compare
BWI76_RS04240 -4.5 -3.3 thr operon leader peptide compare
BWI76_RS10990 -4.4 -2.5 dihydroorotase compare
BWI76_RS18940 -4.4 -5.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00855 -4.3 -8.6 argininosuccinate lyase compare
BWI76_RS00805 -4.3 -8.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS07070 -4.3 -7.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20355 -4.3 -3.0 colicin V production protein compare
BWI76_RS00850 -4.2 -11.6 acetylglutamate kinase compare
BWI76_RS22690 -4.2 -4.5 adenylyl-sulfate kinase compare
BWI76_RS00975 -4.1 -7.3 dihydroxy-acid dehydratase compare
BWI76_RS05835 -4.1 -3.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS04250 -4.1 -9.4 homoserine kinase compare
BWI76_RS01610 -4.0 -6.8 phosphoribosylamine--glycine ligase compare
BWI76_RS05840 -3.9 -6.9 glutamate 5-kinase compare
BWI76_RS23220 -3.9 -10.8 amino-acid N-acetyltransferase compare
BWI76_RS18950 -3.8 -5.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18955 -3.8 -7.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS08385 -3.8 -5.1 citrate (Si)-synthase compare
BWI76_RS00845 -3.8 -10.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23365 -3.7 -6.6 LysR family transcriptional regulator compare
BWI76_RS04245 -3.7 -12.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS22765 -3.6 -11.3 sulfite reductase subunit alpha compare
BWI76_RS25115 -3.5 -7.1 argininosuccinate synthase compare
BWI76_RS03010 -3.4 -7.1 ornithine carbamoyltransferase compare
BWI76_RS22760 -3.4 -8.6 sulfite reductase subunit beta compare
BWI76_RS04510 -3.4 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01655 -3.3 -9.7 homoserine O-succinyltransferase compare
BWI76_RS26000 -3.1 -8.5 aspartate aminotransferase family protein compare
BWI76_RS04675 -3.1 -6.5 3-isopropylmalate dehydrogenase compare
BWI76_RS04665 -3.1 -19.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00980 -3.0 -13.5 PLP-dependent threonine dehydratase compare
BWI76_RS04670 -2.9 -9.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00785 -2.8 -7.4 cystathionine gamma-synthase compare
BWI76_RS27390 -2.8 -3.1 ribonuclease PH compare
BWI76_RS09760 -2.8 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20650 -2.7 -3.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS23240 -2.7 -3.6 exonuclease V subunit gamma compare
BWI76_RS23265 -2.6 -4.9 hypothetical protein compare
BWI76_RS02530 -2.5 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS04680 -2.5 -8.9 2-isopropylmalate synthase compare
BWI76_RS02735 -2.5 -4.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS23230 -2.5 -3.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS01800 -2.4 -5.9 glucose-6-phosphate isomerase compare
BWI76_RS00965 -2.4 -2.1 acetolactate synthase 2 small subunit compare
BWI76_RS21480 -2.4 -6.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS09660 -2.4 -2.3 DNA translocase FtsK compare
BWI76_RS11840 -2.3 -4.0 tryptophan synthase subunit alpha compare
BWI76_RS24285 -2.2 -8.1 cystathionine beta-lyase compare
BWI76_RS21465 -2.2 -3.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04685 -2.1 -6.5 putative leucine operon leader peptide compare
BWI76_RS26055 -2.0 -7.8 siroheme synthase compare
BWI76_RS11855 -2.0 -9.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11850 -2.0 -9.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15850 -2.0 -1.7 DUF1317 domain-containing protein compare
BWI76_RS24900 -2.0 -2.5 DeoR family transcriptional regulator compare
BWI76_RS11845 -1.9 -3.3 tryptophan synthase subunit beta compare
BWI76_RS20640 -1.9 -4.8 cysteine synthase A compare
BWI76_RS00985 -1.8 -5.9 transcriptional regulator IlvY compare
BWI76_RS01210 -1.8 -2.5 tyrosine recombinase XerC compare
BWI76_RS25070 -1.8 -2.4 hypothetical protein compare
BWI76_RS20435 -1.7 -1.5 chorismate synthase compare
BWI76_RS21140 -1.6 -2.6 molecular chaperone HscA compare
BWI76_RS11860 -1.6 -8.3 anthranilate synthase component I compare
BWI76_RS06680 -1.6 -1.3 hypothetical protein compare
BWI76_RS05200 -1.5 -2.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22805 -1.5 -7.6 GTP diphosphokinase compare
BWI76_RS15840 -1.4 -2.9 prophage protein compare
BWI76_RS11980 -1.4 -1.8 DeoR family transcriptional regulator compare
BWI76_RS25425 -1.4 -2.4 arginine repressor compare
BWI76_RS19865 -1.3 -2.2 ecotin compare
BWI76_RS09450 -1.3 -1.8 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS20380 -1.3 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS20440 -1.2 -1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS27430 -1.2 -1.6 (p)ppGpp synthetase compare
BWI76_RS11900 -1.2 -1.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS11255 -1.2 -2.1 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS18780 -1.2 -2.5 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS20995 -1.2 -5.7 RNA degradosome polyphosphate kinase compare
BWI76_RS00390 -1.2 -3.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS16090 -1.2 -1.1 two-component system response regulator DcuR compare
BWI76_RS15830 -1.1 -2.7 hypothetical protein compare
BWI76_RS09970 -1.1 -1.8 porin OmpA compare
BWI76_RS17720 -1.1 -0.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS00960 -1.0 -3.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS21580 -1.0 -1.6 SsrA-binding protein compare
BWI76_RS01890 -1.0 -4.6 transcriptional regulator Zur compare
BWI76_RS20155 -1.0 -2.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS22695 -1.0 -3.9 sulfate adenylyltransferase compare
BWI76_RS14435 -1.0 -1.6 glutamine ABC transporter ATP-binding protein compare
BWI76_RS26570 -1.0 -2.2 anion permease compare
BWI76_RS23480 -1.0 -5.2 EAL domain-containing protein compare
BWI76_RS22700 -1.0 -3.0 sulfate adenylyltransferase subunit 2 compare
BWI76_RS25065 -1.0 -1.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS20750 -1.0 -1.1 carboxysome structural protein EutK compare
BWI76_RS20970 -0.9 -1.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS25285 -0.9 -1.4 HPr family phosphocarrier protein compare
BWI76_RS21680 -0.9 -2.0 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS18000 -0.9 -1.6 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS10955 -0.9 -1.1 hypothetical protein compare
BWI76_RS09655 -0.9 -3.8 leucine-responsive regulatory protein compare
BWI76_RS11515 -0.9 -1.1 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS17110 -0.9 -1.5 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS21450 -0.8 -2.4 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS05075 -0.8 -0.9 type II secretion system protein GspG compare
BWI76_RS00385 -0.8 -5.4 nitrogen assimilation regulatory protein compare
BWI76_RS02180 -0.8 -1.6 hypothetical protein compare
BWI76_RS17330 -0.8 -1.5 nitrate reductase subunit beta compare
BWI76_RS19685 -0.8 -4.2 lysine transporter compare
BWI76_RS19465 -0.8 -2.5 hypothetical protein compare
BWI76_RS10450 -0.8 -2.5 tRNA-Tyr compare
BWI76_RS08210 -0.8 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21235 -0.8 -1.2 hypothetical protein compare
BWI76_RS22095 -0.8 -2.6 multidrug export protein EmrA compare
BWI76_RS13545 -0.8 -1.1 N-acetyltransferase compare
BWI76_RS16755 -0.8 -2.6 acetoin reductase compare
BWI76_RS01195 -0.8 -0.8 membrane protein compare
BWI76_RS01275 -0.7 -2.3 LysR family transcriptional regulator compare
BWI76_RS14935 -0.7 -1.0 NIPSNAP family containing protein compare
BWI76_RS26590 -0.7 -2.2 transcriptional regulator compare
BWI76_RS08275 -0.7 -1.4 LexA regulated protein compare
BWI76_RS06240 -0.7 -2.9 branched-chain amino acid transport system 2 carrier protein BrnQ compare
BWI76_RS17325 -0.7 -2.9 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS00345 -0.7 -2.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS15215 -0.7 -0.9 N-acetyltransferase compare
BWI76_RS01685 -0.7 -5.5 methionine synthase compare
BWI76_RS22705 -0.7 -3.3 siroheme synthase compare
BWI76_RS19025 -0.7 -4.1 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS00710 -0.7 -1.3 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS09650 -0.7 -3.3 hypothetical protein compare
BWI76_RS09025 -0.7 -1.1 GntR family transcriptional regulator compare
BWI76_RS25335 -0.7 -1.2 stringent starvation protein A compare
BWI76_RS13240 -0.7 -1.1 hypothetical protein compare
BWI76_RS25600 -0.7 -0.9 tRNA-Thr compare
BWI76_RS11155 -0.7 -1.5 penicillin-binding protein activator LpoB compare
BWI76_RS25060 -0.7 -2.0 lipoprotein NlpI compare
BWI76_RS04530 -0.7 -1.3 peptidylprolyl isomerase SurA compare
BWI76_RS06595 -0.7 -1.6 hypothetical protein compare
BWI76_RS11345 -0.7 -2.8 LysR family transcriptional regulator compare
BWI76_RS01925 -0.7 -3.4 aromatic amino acid aminotransferase compare
BWI76_RS08310 -0.7 -1.7 potassium-transporting ATPase subunit C compare
BWI76_RS16425 -0.7 -1.2 hypothetical protein compare
BWI76_RS08520 -0.6 -1.9 colicin transporter TolQ compare
BWI76_RS15765 -0.6 -1.3 hypothetical protein compare
BWI76_RS09530 -0.6 -0.9 hypothetical protein compare
BWI76_RS08525 -0.6 -2.4 colicin transporter compare
BWI76_RS15045 -0.6 -1.8 LysR family transcriptional regulator compare
BWI76_RS09190 -0.6 -1.3 hypothetical protein compare
BWI76_RS07780 -0.6 -0.9 hypothetical protein compare
BWI76_RS04100 -0.6 -2.5 peptide chain release factor 3 compare
BWI76_RS21375 -0.6 -0.9 autonomous glycyl radical cofactor GrcA compare
BWI76_RS17050 -0.6 -3.7 FAD-binding oxidoreductase compare
BWI76_RS04595 -0.6 -3.8 DNA-binding transcriptional regulator AraC compare
BWI76_RS19235 -0.6 -2.8 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS04050 -0.6 -1.7 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS11130 -0.6 -2.1 PTS glucose transporter subunit IIBC compare
BWI76_RS21945 -0.6 -1.5 LysR family transcriptional regulator compare
BWI76_RS15210 -0.6 -1.2 LysR family transcriptional regulator compare
BWI76_RS17615 -0.6 -2.0 RNA pseudouridine synthase compare
BWI76_RS08730 -0.6 -2.6 histidine utilization repressor compare
BWI76_RS16500 -0.6 -1.4 superoxide dismutase [Fe] compare
BWI76_RS23125 -0.6 -1.5 propanediol dehydratase small subunit compare
BWI76_RS17975 -0.6 -1.3 tail-specific protease compare
BWI76_RS20910 -0.6 -1.8 glycine cleavage system transcriptional repressor compare
BWI76_RS25480 -0.6 -2.4 ribonuclease E/G compare
BWI76_RS13955 -0.6 -0.7 hypothetical protein compare
BWI76_RS27830 -0.6 -1.2 type I toxin-antitoxin system toxin TisB compare
BWI76_RS10770 -0.6 -1.9 pyrimidine utilization protein C compare
BWI76_RS03045 -0.6 -0.9 hypothetical protein compare
BWI76_RS06120 -0.6 -1.0 membrane protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source MS_media in Klebsiella michiganensis M5al

For carbon source MS_media across organisms