Experiment set8IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -10.3 -7.2 histidinol-phosphate transaminase compare
BWI76_RS20965 -10.1 -6.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS21475 -9.6 -6.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS11965 -9.2 -6.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18950 -9.1 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS02995 -8.5 -8.3 aspartate carbamoyltransferase compare
BWI76_RS23920 -8.4 -5.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18940 -8.2 -5.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00855 -8.2 -8.0 argininosuccinate lyase compare
BWI76_RS04465 -8.1 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -8.0 -7.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS00805 -7.8 -5.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18920 -7.8 -5.4 ATP phosphoribosyltransferase compare
BWI76_RS20350 -7.7 -7.3 amidophosphoribosyltransferase compare
BWI76_RS07065 -7.7 -9.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20355 -7.4 -5.3 colicin V production protein compare
BWI76_RS01655 -7.4 -8.2 homoserine O-succinyltransferase compare
BWI76_RS18955 -7.3 -6.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS23220 -7.0 -9.4 amino-acid N-acetyltransferase compare
BWI76_RS05840 -7.0 -6.9 glutamate 5-kinase compare
BWI76_RS04675 -7.0 -9.7 3-isopropylmalate dehydrogenase compare
BWI76_RS24285 -6.9 -9.0 cystathionine beta-lyase compare
BWI76_RS07070 -6.9 -6.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00785 -6.9 -8.2 cystathionine gamma-synthase compare
BWI76_RS04665 -6.7 -21.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09645 -6.7 -2.9 thioredoxin-disulfide reductase compare
BWI76_RS21265 -6.7 -15.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS26085 -6.6 -4.6 3-dehydroquinate synthase compare
BWI76_RS00980 -6.6 -14.1 PLP-dependent threonine dehydratase compare
BWI76_RS18935 -6.6 -7.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00845 -6.6 -11.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00850 -6.6 -9.2 acetylglutamate kinase compare
BWI76_RS04670 -6.5 -11.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS27385 -6.4 -9.8 orotate phosphoribosyltransferase compare
BWI76_RS04255 -6.3 -12.0 threonine synthase compare
BWI76_RS01615 -6.2 -12.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11860 -6.2 -10.4 anthranilate synthase component I compare
BWI76_RS23365 -6.2 -5.2 LysR family transcriptional regulator compare
BWI76_RS03010 -6.2 -8.1 ornithine carbamoyltransferase compare
BWI76_RS04245 -6.1 -17.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11840 -6.1 -3.1 tryptophan synthase subunit alpha compare
BWI76_RS22760 -6.1 -10.0 sulfite reductase subunit beta compare
BWI76_RS04250 -6.0 -8.1 homoserine kinase compare
BWI76_RS25115 -6.0 -9.4 argininosuccinate synthase compare
BWI76_RS23360 -6.0 -5.8 diaminopimelate decarboxylase compare
BWI76_RS00990 -6.0 -10.7 ketol-acid reductoisomerase compare
BWI76_RS08385 -5.9 -5.8 citrate (Si)-synthase compare
BWI76_RS00835 -5.9 -14.9 phosphoenolpyruvate carboxylase compare
BWI76_RS11850 -5.9 -8.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS13920 -5.8 -8.0 magnesium-translocating P-type ATPase compare
BWI76_RS09755 -5.8 -10.5 phosphoserine transaminase compare
BWI76_RS05835 -5.8 -5.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS20895 -5.8 -7.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04685 -5.8 -12.9 putative leucine operon leader peptide compare
BWI76_RS01610 -5.8 -6.3 phosphoribosylamine--glycine ligase compare
BWI76_RS09910 -5.6 -14.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00975 -5.6 -9.3 dihydroxy-acid dehydratase compare
BWI76_RS00985 -5.6 -8.0 transcriptional regulator IlvY compare
BWI76_RS22765 -5.3 -14.1 sulfite reductase subunit alpha compare
BWI76_RS04645 -5.3 -5.3 3-dehydroquinase compare
BWI76_RS18925 -5.3 -8.0 histidinol dehydrogenase compare
BWI76_RS25645 -5.2 -8.9 shikimate dehydrogenase compare
BWI76_RS04680 -5.0 -10.2 2-isopropylmalate synthase compare
BWI76_RS00400 -4.9 -3.3 glutamine synthetase compare
BWI76_RS09760 -4.9 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01800 -4.8 -4.9 glucose-6-phosphate isomerase compare
BWI76_RS22755 -4.6 -6.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS27390 -4.6 -3.4 ribonuclease PH compare
BWI76_RS11855 -4.6 -11.0 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00180 -4.5 -2.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04160 -4.5 -8.3 phosphoserine phosphatase compare
BWI76_RS10990 -4.5 -2.5 dihydroorotase compare
BWI76_RS11845 -4.4 -3.6 tryptophan synthase subunit beta compare
BWI76_RS02735 -4.4 -5.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS21465 -4.3 -3.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS23240 -4.3 -2.9 exonuclease V subunit gamma compare
BWI76_RS04240 -4.2 -4.0 thr operon leader peptide compare
BWI76_RS20435 -4.1 -2.5 chorismate synthase compare
BWI76_RS20650 -3.9 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS23265 -3.8 -5.6 hypothetical protein compare
BWI76_RS00965 -3.8 -2.3 acetolactate synthase 2 small subunit compare
BWI76_RS26570 -3.8 -5.1 anion permease compare
BWI76_RS26055 -3.7 -6.5 siroheme synthase compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS00960 -3.6 -5.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS22690 -3.6 -4.0 adenylyl-sulfate kinase compare
BWI76_RS15115 -3.4 -6.4 MFS transporter compare
BWI76_RS26000 -3.4 -7.3 aspartate aminotransferase family protein compare
BWI76_RS01200 -3.3 -3.8 diaminopimelate epimerase compare
BWI76_RS05015 -3.0 -3.5 transcriptional regulator compare
BWI76_RS05200 -2.9 -3.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS06525 -2.8 -5.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS04510 -2.7 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01275 -2.5 -8.6 LysR family transcriptional regulator compare
BWI76_RS15225 -2.2 -1.8 DeoR family transcriptional regulator compare
BWI76_RS05450 -2.1 -2.5 ribonuclease HI compare
BWI76_RS00390 -2.1 -6.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS20640 -2.0 -4.4 cysteine synthase A compare
BWI76_RS22695 -2.0 -7.7 sulfate adenylyltransferase compare
BWI76_RS27430 -1.9 -1.8 (p)ppGpp synthetase compare
BWI76_RS01210 -1.9 -2.4 tyrosine recombinase XerC compare
BWI76_RS23480 -1.9 -11.5 EAL domain-containing protein compare
BWI76_RS06530 -1.9 -7.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS17975 -1.8 -2.4 tail-specific protease compare
BWI76_RS01350 -1.8 -1.9 NAD(P)H-flavin reductase compare
BWI76_RS09655 -1.8 -5.8 leucine-responsive regulatory protein compare
BWI76_RS20970 -1.7 -2.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS13915 -1.7 -3.6 magnesium transport protein MgtC compare
BWI76_RS17720 -1.7 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS00970 -1.7 -2.4 branched chain amino acid aminotransferase compare
BWI76_RS20440 -1.7 -1.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS22700 -1.6 -4.1 sulfate adenylyltransferase subunit 2 compare
BWI76_RS20380 -1.6 -1.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS26620 -1.6 -1.7 Fe-S biogenesis protein NfuA compare
BWI76_RS15850 -1.5 -1.0 DUF1317 domain-containing protein compare
BWI76_RS15110 -1.5 -7.9 putative excinuclease ABC subunit A compare
BWI76_RS21480 -1.5 -3.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS25070 -1.5 -2.2 hypothetical protein compare
BWI76_RS13595 -1.5 -3.2 transcriptional regulator compare
BWI76_RS26075 -1.5 -3.8 DNA adenine methylase compare
BWI76_RS27440 -1.4 -3.5 DNA helicase RecG compare
BWI76_RS20995 -1.4 -6.2 RNA degradosome polyphosphate kinase compare
BWI76_RS12090 -1.4 -2.8 HNH endonuclease compare
BWI76_RS04705 -1.4 -5.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS18165 -1.4 -1.3 NUDIX pyrophosphatase compare
BWI76_RS22705 -1.3 -6.8 siroheme synthase compare
BWI76_RS21370 -1.3 -2.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS02530 -1.3 -2.9 tRNA dimethylallyltransferase compare
BWI76_RS15840 -1.3 -2.0 prophage protein compare
BWI76_RS16965 -1.3 -2.9 murein lipoprotein compare
BWI76_RS09660 -1.3 -1.1 DNA translocase FtsK compare
BWI76_RS21140 -1.3 -1.7 molecular chaperone HscA compare
BWI76_RS00385 -1.2 -7.7 nitrogen assimilation regulatory protein compare
BWI76_RS09870 -1.2 -5.9 aromatic amino acid aminotransferase compare
BWI76_RS25315 -1.2 -9.7 glutamate synthase large subunit compare
BWI76_RS25425 -1.2 -1.3 arginine repressor compare
BWI76_RS24025 -1.2 -6.6 agmatinase compare
BWI76_RS00345 -1.2 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS19025 -1.2 -7.5 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS17110 -1.2 -1.9 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS17615 -1.1 -3.2 RNA pseudouridine synthase compare
BWI76_RS19690 -1.1 -1.7 LysR family transcriptional regulator compare
BWI76_RS25065 -1.1 -3.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS25320 -1.1 -5.5 glutamate synthase compare
BWI76_RS00380 -1.1 -6.7 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS07740 -1.1 -1.9 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS16075 -1.1 -1.4 oxidoreductase compare
BWI76_RS09610 -1.1 -2.5 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS12145 -1.1 -1.7 hypothetical protein compare
BWI76_RS25960 -1.1 -3.5 NUDIX hydrolase compare
BWI76_RS17400 -1.1 -1.5 transporter compare
BWI76_RS19375 -1.0 -2.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS01685 -1.0 -6.7 methionine synthase compare
BWI76_RS02985 -1.0 -3.5 reactive intermediate/imine deaminase compare
BWI76_RS05555 -1.0 -2.0 Crl family RNA polymerase assembly factor compare
BWI76_RS06185 -1.0 -5.6 shikimate kinase II compare
BWI76_RS21580 -1.0 -0.9 SsrA-binding protein compare
BWI76_RS24075 -1.0 -2.7 glutathione synthase compare
BWI76_RS23885 -1.0 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS25505 -0.9 -5.4 RNase E specificity factor CsrD compare
BWI76_RS11130 -0.9 -4.9 PTS glucose transporter subunit IIBC compare
BWI76_RS26395 -0.9 -4.0 cell division protein FtsE compare
BWI76_RS11040 -0.9 -2.3 ribonuclease E compare
BWI76_RS26175 -0.9 -4.4 DeoR/GlpR family transcriptional regulator compare
BWI76_RS26200 -0.9 -4.2 starch synthase compare
BWI76_RS05970 -0.9 -2.6 hypothetical protein compare
BWI76_RS16315 -0.9 -1.4 SirA-like protein compare
BWI76_RS17980 -0.9 -1.7 RNA chaperone ProQ compare
BWI76_RS15830 -0.9 -1.6 hypothetical protein compare
BWI76_RS25280 -0.9 -2.0 RNase adaptor protein RapZ compare
BWI76_RS18415 -0.9 -2.6 very short patch repair endonuclease compare
BWI76_RS00600 -0.9 -3.6 LacI family transcriptional regulator compare
BWI76_RS14390 -0.8 -1.6 hypothetical protein compare
BWI76_RS01205 -0.8 -2.0 DUF484 family protein compare
BWI76_RS09650 -0.8 -4.1 hypothetical protein compare
BWI76_RS25335 -0.8 -3.2 stringent starvation protein A compare
BWI76_RS24100 -0.8 -2.7 YggS family pyridoxal phosphate enzyme compare
BWI76_RS11520 -0.8 -1.1 hypothetical protein compare
BWI76_RS21000 -0.8 -3.9 exopolyphosphatase compare
BWI76_RS11835 -0.8 -2.0 putative regulatory protein MarR compare
BWI76_RS10815 -0.8 -3.1 iron permease compare
BWI76_RS06765 -0.8 -2.5 transcriptional regulator compare
BWI76_RS00355 -0.8 -2.0 DNA polymerase I compare
BWI76_RS15835 -0.8 -0.8 hypothetical protein compare
BWI76_RS14615 -0.8 -1.1 hypothetical protein compare
BWI76_RS01330 -0.8 -2.7 twin-arginine translocase subunit TatC compare
BWI76_RS05120 -0.8 -4.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS22090 -0.8 -2.0 transcriptional regulator compare
BWI76_RS25300 -0.8 -2.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS06770 -0.8 -5.1 Hha toxicity attenuator compare
BWI76_RS24115 -0.8 -3.6 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS19845 -0.7 -2.7 phosphatase compare
BWI76_RS24850 -0.7 -4.4 DeoR family transcriptional regulator compare
BWI76_RS21565 -0.7 -1.1 outer membrane protein assembly factor BamE compare
BWI76_RS19685 -0.7 -3.0 lysine transporter compare
BWI76_RS23485 -0.7 -3.9 hypothetical protein compare
BWI76_RS18715 -0.7 -3.8 hypothetical protein compare
BWI76_RS14820 -0.7 -1.5 LysR family transcriptional regulator compare
BWI76_RS14805 -0.7 -2.0 hypothetical protein compare
BWI76_RS21310 -0.7 -0.8 DNA repair protein RecO compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source MS_media across organisms