Experiment set8IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with MS_media 0.5x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS09635 +1.1 2.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20750 +1.1 2.2 carboxysome structural protein EutK compare
BWI76_RS12465 +1.0 2.0 phage shock protein D compare
BWI76_RS17770 +0.9 1.9 isomerase/hydrolase compare
BWI76_RS15035 +0.8 2.5 metal ABC transporter permease compare
BWI76_RS11110 +0.8 3.2 cell division protein YceG compare
BWI76_RS19495 +0.8 1.8 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS20155 +0.8 2.3 NADH-quinone oxidoreductase subunit I compare
BWI76_RS18605 +0.8 1.4 oxidoreductase molybdopterin-binding protein compare
BWI76_RS16935 +0.8 1.6 shikimate dehydrogenase compare
BWI76_RS09560 +0.7 2.3 DoxX family membrane protein compare
BWI76_RS05050 +0.7 2.3 general secretion pathway protein GspL compare
BWI76_RS08495 +0.7 4.7 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00025 +0.7 1.1 hypothetical protein compare
BWI76_RS10755 +0.7 1.6 pyrimidine utilization flavin reductase protein F compare
BWI76_RS08765 +0.7 2.3 8-amino-7-oxononanoate synthase compare
BWI76_RS13820 +0.7 1.8 hypothetical protein compare
BWI76_RS11015 +0.6 1.7 hypothetical protein compare
BWI76_RS12625 +0.6 3.4 isoflavone reductase compare
BWI76_RS01585 +0.6 3.8 transcriptional regulator compare
BWI76_RS23820 +0.6 2.3 flavodoxin FldB compare
BWI76_RS07645 +0.6 1.9 short-chain dehydrogenase/reductase compare
BWI76_RS20720 +0.6 1.6 hypothetical protein compare
BWI76_RS13785 +0.6 1.2 ABC transporter permease compare
BWI76_RS27875 +0.6 1.0 membrane protein compare
BWI76_RS06435 +0.6 1.5 MFS transporter compare
BWI76_RS22205 +0.6 1.8 cation ABC transporter ATP-binding protein compare
BWI76_RS09505 +0.6 1.8 arginine transporter permease subunit ArtM compare
BWI76_RS11190 +0.6 2.4 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS26290 +0.6 3.0 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS14915 +0.6 2.2 hypothetical protein compare
BWI76_RS24945 +0.6 1.2 glutamine amidotransferase compare
BWI76_RS20375 +0.6 1.9 membrane protein compare
BWI76_RS08500 +0.6 1.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS14775 +0.6 1.6 creatinine amidohydrolase compare
BWI76_RS25850 +0.6 2.8 prepilin peptidase compare
BWI76_RS17205 +0.6 2.2 cardiolipin synthase A compare
BWI76_RS08870 +0.5 2.8 inner membrane transport permease YbhS compare
BWI76_RS23050 +0.5 1.8 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS19480 +0.5 2.5 transcriptional regulator compare
BWI76_RS11820 +0.5 1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS20230 +0.5 0.8 hypothetical protein compare
BWI76_RS22935 +0.5 1.5 L-fucose mutarotase compare
BWI76_RS16000 +0.5 1.1 multidrug transporter subunit MdtI compare
BWI76_RS09030 +0.5 2.3 transpeptidase compare
BWI76_RS13320 +0.5 1.6 putative LpxA-like enzyme compare
BWI76_RS15980 +0.5 1.6 lysine transporter LysE compare
BWI76_RS26440 +0.5 1.3 hypothetical protein compare
BWI76_RS10540 +0.5 1.5 allantoinase compare
BWI76_RS26410 +0.5 1.3 membrane protein compare
BWI76_RS14265 +0.5 2.3 LysR family transcriptional regulator compare
BWI76_RS06475 +0.5 0.9 protoheme IX farnesyltransferase compare
BWI76_RS14980 +0.5 1.0 hypothetical protein compare
BWI76_RS11360 +0.5 2.3 L-asparaginase compare
BWI76_RS15530 +0.5 1.9 hypothetical protein compare
BWI76_RS17970 +0.5 1.8 zinc metalloprotease HtpX compare
BWI76_RS20115 +0.5 2.2 hypothetical protein compare
BWI76_RS20090 +0.5 2.1 ribonuclease Z compare
BWI76_RS09275 +0.5 2.3 major capsid protein compare
BWI76_RS24035 +0.5 1.8 hypothetical protein compare
BWI76_RS09305 +0.5 1.0 hypothetical protein compare
BWI76_RS12750 +0.5 1.7 hypothetical protein compare
BWI76_RS20635 +0.5 2.6 sulfate transporter CysZ compare
BWI76_RS08515 +0.5 1.5 acyl-CoA thioesterase YbgC compare
BWI76_RS12865 +0.5 2.8 acetylornithine deacetylase compare
BWI76_RS14325 +0.5 1.8 maturase compare
BWI76_RS06320 +0.5 1.9 Xaa-Pro aminopeptidase compare
BWI76_RS07605 +0.5 2.1 N-acetyltransferase GCN5 compare
BWI76_RS10400 +0.5 2.1 hypothetical protein compare
BWI76_RS10505 +0.5 1.7 putative guanine/xanthin permease compare
BWI76_RS12270 +0.5 1.2 hypothetical protein compare
BWI76_RS24065 +0.5 2.5 deoxyribonuclease I compare
BWI76_RS09615 +0.5 1.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS15435 +0.5 1.0 hypothetical protein compare
BWI76_RS06325 +0.5 2.0 hypothetical protein compare
BWI76_RS18565 +0.5 2.0 pemk protein compare
BWI76_RS11455 +0.5 2.1 AraC family transcriptional regulator compare
BWI76_RS21485 +0.5 3.2 DUF4154 domain-containing protein compare
BWI76_RS24110 +0.5 1.5 YggU family protein compare
BWI76_RS06470 +0.5 1.8 hypothetical protein compare
BWI76_RS21505 +0.5 0.9 hypothetical protein compare
BWI76_RS24500 +0.5 1.7 urease subunit gamma compare
BWI76_RS27735 +0.5 1.0 hypothetical protein compare
BWI76_RS10820 +0.5 0.8 iron uptake system protein EfeO compare
BWI76_RS22815 +0.5 3.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12665 +0.5 1.4 hypothetical protein compare
BWI76_RS07450 +0.5 1.8 transcriptional regulator compare
BWI76_RS15960 +0.5 1.3 LysR family transcriptional regulator compare
BWI76_RS17765 +0.5 1.6 hypothetical protein compare
BWI76_RS09440 +0.5 1.5 hypothetical protein compare
BWI76_RS10680 +0.4 1.5 tartrate dehydrogenase compare
BWI76_RS21810 +0.4 1.0 universal stress protein compare
BWI76_RS17200 +0.4 1.1 hypothetical protein compare
BWI76_RS19710 +0.4 1.1 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS16135 +0.4 1.0 acetyl-CoA acetyltransferase compare
BWI76_RS21675 +0.4 1.1 hypothetical protein compare
BWI76_RS13185 +0.4 2.8 MFS transporter compare
BWI76_RS00480 +0.4 1.1 hypothetical protein compare
BWI76_RS09285 +0.4 2.4 hypothetical protein compare
BWI76_RS16785 +0.4 2.7 peptidase M20 compare
BWI76_RS19325 +0.4 0.5 mandelate racemase compare
BWI76_RS17525 +0.4 1.4 XshC-Cox1-family protein compare
BWI76_RS05430 +0.4 2.6 UbiE/COQ5 family methyltransferase compare
BWI76_RS20180 +0.4 2.5 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS11285 +0.4 0.9 transcriptional regulator compare
BWI76_RS02180 +0.4 1.1 hypothetical protein compare
BWI76_RS23955 +0.4 1.9 LysR family transcriptional regulator compare
BWI76_RS19770 +0.4 0.9 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS22860 +0.4 1.9 SecY-interacting protein compare
BWI76_RS20295 +0.4 1.9 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS19995 +0.4 1.0 IclR family transcriptional regulator compare
BWI76_RS20540 +0.4 1.9 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS24485 +0.4 1.3 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS16810 +0.4 1.2 RpiR family transcriptional regulator compare
BWI76_RS12855 +0.4 1.0 enamine deaminase RidA compare
BWI76_RS18810 +0.4 2.1 nitrogenase iron protein compare
BWI76_RS23320 +0.4 1.0 hypothetical protein compare
BWI76_RS01775 +0.4 0.8 hypothetical protein compare
BWI76_RS14970 +0.4 1.0 pyrroline-5-carboxylate reductase compare
BWI76_RS16910 +0.4 1.0 2-keto-4-pentenoate hydratase compare
BWI76_RS13215 +0.4 0.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS01715 +0.4 2.5 shikimate 5-dehydrogenase compare
BWI76_RS16270 +0.4 2.6 fumarate hydratase, class II compare
BWI76_RS20190 +0.4 2.3 NADH-quinone oxidoreductase subunit A compare
BWI76_RS14505 +0.4 0.9 salicylate synthase Irp9 compare
BWI76_RS19890 +0.4 1.8 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS11300 +0.4 0.7 cupin compare
BWI76_RS11535 +0.4 2.2 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein compare
BWI76_RS01595 +0.4 1.6 zinc resistance protein compare
BWI76_RS07525 +0.4 2.1 ABC transporter permease compare
BWI76_RS23530 +0.4 2.2 MarR family transcriptional regulator compare
BWI76_RS13480 +0.4 0.9 XRE family transcriptional regulator compare
BWI76_RS26515 +0.4 1.6 nickel import ATP-binding protein NikD compare
BWI76_RS08840 +0.4 1.3 hypothetical protein compare
BWI76_RS15030 +0.4 1.6 ABC transporter compare
BWI76_RS04815 +0.4 1.1 cell division protein ZapD compare
BWI76_RS11640 +0.4 2.1 ABC transporter membrane protein compare
BWI76_RS27670 +0.4 1.1 LysR family transcriptional regulator compare
BWI76_RS09165 +0.4 1.9 phosphatase YbjI compare
BWI76_RS13130 +0.4 1.3 phenylacetic acid degradation protein PaaD compare
BWI76_RS15015 +0.4 0.9 DUF2132 domain-containing protein compare
BWI76_RS21020 +0.4 2.4 MFS transporter compare
BWI76_RS15860 +0.4 1.2 adenine-specific DNA methyltransferase compare
BWI76_RS16120 +0.4 1.3 4-carboxymuconolactone decarboxylase compare
BWI76_RS14320 +0.4 0.7 hypothetical protein compare
BWI76_RS14575 +0.4 1.6 TENA/THI-4 family protein compare
BWI76_RS16020 +0.4 1.6 malonate decarboxylase subunit alpha compare
BWI76_RS18225 +0.4 1.2 universal stress protein C compare
BWI76_RS18335 +0.4 2.1 DNA-binding response regulator compare
BWI76_RS16215 +0.4 1.5 hypothetical protein compare
BWI76_RS01690 +0.4 1.4 membrane protein compare
BWI76_RS13055 +0.4 2.7 NmrA family protein compare
BWI76_RS12450 +0.4 1.8 phage shock protein PspA compare
BWI76_RS27395 +0.4 1.3 hypothetical protein compare
BWI76_RS20795 +0.4 0.8 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS16040 +0.4 1.3 biotin-independent malonate decarboxylase subunit gamma compare
BWI76_RS05680 +0.4 2.1 LacI family transcriptional regulator compare
BWI76_RS07110 +0.4 1.7 DNA-binding protein compare
BWI76_RS02825 +0.4 1.8 putative acyltransferase domain protein compare
BWI76_RS25485 +0.4 0.9 septum formation protein Maf compare
BWI76_RS22530 +0.4 2.3 macrolide ABC transporter permease/ATP-binding protein MacB compare
BWI76_RS15190 +0.4 1.7 GGDEF domain-containing protein compare
BWI76_RS21325 +0.4 1.3 hypothetical protein compare
BWI76_RS06490 +0.4 2.3 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS06915 +0.4 2.2 membrane protein compare
BWI76_RS00375 +0.4 0.6 hypothetical protein compare
BWI76_RS03105 +0.4 0.7 myo-inosose-2 dehydratase compare
BWI76_RS10035 +0.4 0.8 hypothetical protein compare
BWI76_RS09130 +0.4 1.8 biofilm formation regulatory protein BssR compare
BWI76_RS20000 +0.4 1.5 competence/damage-inducible protein A compare
BWI76_RS15300 +0.4 1.9 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS07875 +0.4 1.7 dihydrofolate reductase compare
BWI76_RS16510 +0.4 1.8 transcriptional repressor PurR compare
BWI76_RS02875 +0.4 2.3 membrane protein compare
BWI76_RS08865 +0.4 2.5 ABC transporter inner membrane compare
BWI76_RS05500 +0.4 2.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit C compare
BWI76_RS14825 +0.4 0.4 dienelactone hydrolase family protein compare
BWI76_RS03595 +0.4 0.4 ethanolamine utilization protein EutM compare
BWI76_RS15790 +0.4 2.1 replication protein compare
BWI76_RS13730 +0.4 1.0 hypothetical protein compare
BWI76_RS07360 +0.4 2.4 phenylalanine transporter compare
BWI76_RS26125 +0.4 2.7 carboxypeptidase/penicillin-binding protein 1A compare
BWI76_RS09595 +0.4 1.8 macrolide transporter subunit MacA compare
BWI76_RS12895 +0.3 0.9 hypothetical protein compare
BWI76_RS08405 +0.3 1.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS05485 +0.3 2.3 transpeptidase compare
BWI76_RS08735 +0.3 1.6 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS23825 +0.3 2.1 hypothetical protein compare
BWI76_RS07160 +0.3 1.1 MBL fold hydrolase compare
BWI76_RS16765 +0.3 1.7 spermidine/putrescine ABC transporter permease compare
BWI76_RS06465 +0.3 0.7 IclR family transcriptional regulator compare
BWI76_RS01565 +0.3 1.0 NADH pyrophosphatase compare
BWI76_RS01515 +0.3 1.7 PTS family cellobiose transporter subunit IIA compare
BWI76_RS13740 +0.3 1.9 formate dehydrogenase-N subunit alpha compare
BWI76_RS16310 +0.3 2.3 hypothetical protein compare
BWI76_RS06550 +0.3 2.4 competence protein ComEA compare
BWI76_RS00240 +0.3 1.1 FMN-binding protein MioC compare
BWI76_RS10735 +0.3 1.1 hypothetical protein compare
BWI76_RS18425 +0.3 1.3 phosphohydrolase compare
BWI76_RS16830 +0.3 1.8 ABC transporter compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source MS_media across organisms