Experiment set8IT038 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS08980 +1.1 2.5 DNA starvation/stationary phase protection protein compare
BWI76_RS20785 +1.1 2.4 ethanolamine utilization protein EutJ compare
BWI76_RS06680 +1.0 1.6 hypothetical protein compare
BWI76_RS27425 +1.0 3.4 DNA-directed RNA polymerase subunit omega compare
BWI76_RS24925 +0.9 2.9 DnaA initiator-associating protein DiaA compare
BWI76_RS21540 +0.9 5.8 membrane protein compare
BWI76_RS05645 +0.9 2.5 fructuronate reductase compare
BWI76_RS17770 +0.8 1.5 isomerase/hydrolase compare
BWI76_RS12550 +0.8 2.0 hypothetical protein compare
BWI76_RS14460 +0.8 1.8 MurR/RpiR family transcriptional regulator compare
BWI76_RS25870 +0.8 2.2 elongation factor Tu compare
BWI76_RS12495 +0.8 2.2 2-Cys peroxiredoxin compare
BWI76_RS15980 +0.7 2.6 lysine transporter LysE compare
BWI76_RS21535 +0.7 4.8 inner membrane protein YpjD compare
BWI76_RS16895 +0.7 1.8 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS19325 +0.7 1.2 mandelate racemase compare
BWI76_RS26405 +0.7 1.6 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS24035 +0.7 2.1 hypothetical protein compare
BWI76_RS13960 +0.7 1.5 urea ABC transporter periplasmic protein compare
BWI76_RS16950 +0.7 1.8 TetR family transcriptional regulator compare
BWI76_RS18385 +0.7 1.4 hypothetical protein compare
BWI76_RS10575 +0.7 1.6 polar amino acid ABC transporter permease compare
BWI76_RS06320 +0.6 1.5 Xaa-Pro aminopeptidase compare
BWI76_RS14780 +0.6 1.8 phosphotriesterase compare
BWI76_RS22815 +0.6 4.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS18335 +0.6 4.3 DNA-binding response regulator compare
BWI76_RS14970 +0.6 1.8 pyrroline-5-carboxylate reductase compare
BWI76_RS24500 +0.6 1.4 urease subunit gamma compare
BWI76_RS01190 +0.6 2.2 iron donor protein CyaY compare
BWI76_RS04560 +0.6 2.2 holo-ACP synthase CitX compare
BWI76_RS15410 +0.6 1.9 N-acetyltransferase compare
BWI76_RS27890 +0.6 1.9 GntR family transcriptional regulator compare
BWI76_RS04715 +0.6 1.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS10745 +0.6 1.2 hypothetical protein compare
BWI76_RS14145 +0.6 2.9 dihydrolipoyl dehydrogenase compare
BWI76_RS26515 +0.6 1.9 nickel import ATP-binding protein NikD compare
BWI76_RS23760 +0.6 1.6 tRNA-Gly compare
BWI76_RS11060 +0.6 1.9 septum formation inhibitor Maf compare
BWI76_RS20750 +0.6 1.1 carboxysome structural protein EutK compare
BWI76_RS16210 +0.6 1.7 hypothetical protein compare
BWI76_RS20150 +0.6 1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS04360 +0.6 2.1 ribonucleoside hydrolase RihC compare
BWI76_RS14740 +0.6 2.7 LysR family transcriptional regulator compare
BWI76_RS08600 +0.6 2.2 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS19100 +0.6 3.2 putative acid phosphatase compare
BWI76_RS18070 +0.6 0.9 DNA polymerase III subunit epsilon compare
BWI76_RS06045 +0.6 3.7 hypothetical protein compare
BWI76_RS13730 +0.6 2.1 hypothetical protein compare
BWI76_RS07635 +0.6 1.8 Hok/gef cell toxic protein compare
BWI76_RS13445 +0.6 1.8 alpha/beta hydrolase compare
BWI76_RS12665 +0.6 2.1 hypothetical protein compare
BWI76_RS26235 +0.6 3.0 gluconate transporter compare
BWI76_RS00710 +0.5 1.9 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS17665 +0.5 2.2 proteasome-type protease compare
BWI76_RS08395 +0.5 1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS02695 +0.5 1.8 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS05235 +0.5 1.1 hypothetical protein compare
BWI76_RS13240 +0.5 1.4 hypothetical protein compare
BWI76_RS02745 +0.5 1.1 hypothetical protein compare
BWI76_RS26890 +0.5 1.3 hypothetical protein compare
BWI76_RS06325 +0.5 1.5 hypothetical protein compare
BWI76_RS05970 +0.5 2.0 hypothetical protein compare
BWI76_RS01235 +0.5 2.0 hypothetical protein compare
BWI76_RS21710 +0.5 1.9 nitroreductase compare
BWI76_RS22850 +0.5 1.9 tRNA pseudouridine synthase TruC compare
BWI76_RS17935 +0.5 2.6 DUF2627 domain-containing protein compare
BWI76_RS01720 +0.5 2.3 L-sorbose 1-phosphate reductase (EC 1.1.1.-) (from data) compare
BWI76_RS20130 +0.5 2.0 NADH-quinone oxidoreductase subunit N compare
BWI76_RS18870 +0.5 1.1 protein NifZ compare
BWI76_RS07435 +0.5 1.5 LacI family transcriptional regulator compare
BWI76_RS21565 +0.5 1.0 outer membrane protein assembly factor BamE compare
BWI76_RS08750 +0.5 1.1 kinase inhibitor compare
BWI76_RS09940 +0.5 1.5 paraquat-inducible protein B compare
BWI76_RS15195 +0.5 1.7 DUF4186 domain-containing protein compare
BWI76_RS24825 +0.5 0.9 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS20755 +0.5 1.7 microcompartment protein EutL compare
BWI76_RS03520 +0.5 4.5 diguanylate cyclase compare
BWI76_RS18580 +0.5 1.5 hypothetical protein compare
BWI76_RS12070 +0.5 0.9 hypothetical protein compare
BWI76_RS11460 +0.5 1.6 DUF441 family protein compare
BWI76_RS22505 +0.5 2.6 3-oxoacyl-ACP reductase compare
BWI76_RS05635 +0.5 2.5 AraC family transcriptional regulator compare
BWI76_RS09445 +0.5 1.5 NADPH-dependent oxidoreductase compare
BWI76_RS10820 +0.5 1.5 iron uptake system protein EfeO compare
BWI76_RS17410 +0.5 1.8 sodium-potassium/proton antiporter ChaA compare
BWI76_RS04895 +0.5 0.9 hypothetical protein compare
BWI76_RS19330 +0.5 0.8 HAD family hydrolase compare
BWI76_RS04815 +0.5 1.3 cell division protein ZapD compare
BWI76_RS09155 +0.5 2.5 undecaprenyl-diphosphatase compare
BWI76_RS11285 +0.5 1.0 transcriptional regulator compare
BWI76_RS21490 +0.5 3.5 GGDEF domain-containing protein compare
BWI76_RS01835 +0.5 2.4 chemotaxis protein CheW compare
BWI76_RS06200 +0.5 1.7 hypothetical protein compare
BWI76_RS02920 +0.5 1.8 addiction module toxin RelE compare
BWI76_RS11150 +0.5 1.4 membrane protein compare
BWI76_RS04055 +0.5 4.1 GGDEF domain-containing protein compare
BWI76_RS15760 +0.5 1.1 hypothetical protein compare
BWI76_RS27475 +0.5 3.3 regulatory protein GntR family protein compare
BWI76_RS06340 +0.5 0.8 hypothetical protein compare
BWI76_RS03175 +0.5 2.2 hypothetical protein compare
BWI76_RS15765 +0.5 2.4 hypothetical protein compare
BWI76_RS18270 +0.4 1.6 hypothetical protein compare
BWI76_RS10505 +0.4 2.7 putative guanine/xanthin permease compare
BWI76_RS19520 +0.4 2.4 acetyltransferase GCN5 compare
BWI76_RS15120 +0.4 2.2 hypothetical protein compare
BWI76_RS18090 +0.4 1.7 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS05965 +0.4 1.6 hypothetical protein compare
BWI76_RS05050 +0.4 1.9 general secretion pathway protein GspL compare
BWI76_RS16910 +0.4 1.1 2-keto-4-pentenoate hydratase compare
BWI76_RS04200 +0.4 2.4 phosphoglycerate mutase GpmB compare
BWI76_RS23505 +0.4 3.9 ferrous iron transporter B compare
BWI76_RS21750 +0.4 3.3 amidohydrolase family protein compare
BWI76_RS10540 +0.4 1.6 allantoinase compare
BWI76_RS24080 +0.4 0.9 DUF179 domain-containing protein compare
BWI76_RS09280 +0.4 2.9 terminase endonuclease subunit compare
BWI76_RS06405 +0.4 0.9 2-dehydropantoate 2-reductase compare
BWI76_RS11430 +0.4 0.8 lipoprotein compare
BWI76_RS20730 +0.4 1.2 hypothetical protein compare
BWI76_RS20330 +0.4 1.5 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS19750 +0.4 1.7 elongation factor P-like protein YeiP compare
BWI76_RS09630 +0.4 1.7 leucyl/phenylalanyl-tRNA--protein transferase compare
BWI76_RS17200 +0.4 1.0 hypothetical protein compare
BWI76_RS10510 +0.4 1.2 OHCU decarboxylase compare
BWI76_RS21200 +0.4 1.7 aldose epimerase compare
BWI76_RS24600 +0.4 2.1 dihydroxyacetone kinase compare
BWI76_RS23470 +0.4 3.6 hypothetical protein compare
BWI76_RS20145 +0.4 1.0 NADH-quinone oxidoreductase subunit K compare
BWI76_RS06335 +0.4 1.6 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS18390 +0.4 1.8 hypothetical protein compare
BWI76_RS15290 +0.4 0.9 transcriptional regulator compare
BWI76_RS03920 +0.4 1.5 N-acetyltransferase compare
BWI76_RS23575 +0.4 1.8 hypothetical protein compare
BWI76_RS21715 +0.4 1.5 transcriptional regulator compare
BWI76_RS19980 +0.4 2.0 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS03195 +0.4 2.8 P4 phage protein compare
BWI76_RS19070 +0.4 3.2 rhamnosyltransferase compare
BWI76_RS22470 +0.4 1.1 transporter permease compare
BWI76_RS26005 +0.4 1.8 glutamine amidotransferase compare
BWI76_RS01995 +0.4 0.8 AraC family transcriptional regulator compare
BWI76_RS07165 +0.4 1.7 hypothetical protein compare
BWI76_RS09860 +0.4 1.5 hypothetical protein compare
BWI76_RS06030 +0.4 1.8 homocysteine S-methyltransferase compare
BWI76_RS06975 +0.4 3.0 DNA-binding transcriptional activator AllS compare
BWI76_RS10680 +0.4 2.1 tartrate dehydrogenase compare
BWI76_RS23255 +0.4 1.6 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS07350 +0.4 1.6 alcohol dehydrogenase compare
BWI76_RS26465 +0.4 3.0 4-amino-4-deoxy-L-arabinose lipid A transferase compare
BWI76_RS22095 +0.4 1.7 multidrug export protein EmrA compare
BWI76_RS21485 +0.4 2.9 DUF4154 domain-containing protein compare
BWI76_RS08375 +0.4 1.4 pyroglutamyl-peptidase I compare
BWI76_RS19365 +0.4 2.1 ribulokinase compare
BWI76_RS17515 +0.4 1.3 dihydropyrimidinase compare
BWI76_RS06060 +0.4 1.0 DNA-binding response regulator compare
BWI76_RS26185 +0.4 0.7 thiosulfate sulfurtransferase compare
BWI76_RS15095 +0.4 1.3 isochorismatase compare
BWI76_RS20930 +0.4 1.0 arsenate reductase (glutaredoxin) compare
BWI76_RS05785 +0.4 1.1 CI repressor compare
BWI76_RS02855 +0.4 1.2 cytochrome B562 compare
BWI76_RS22435 +0.4 1.6 iron ABC transporter permease AfeC compare
BWI76_RS13380 +0.4 1.5 hypothetical protein compare
BWI76_RS13110 +0.4 1.8 phenylacetic acid degradation protein compare
BWI76_RS08910 +0.4 1.5 transketolase domain-containing protein compare
BWI76_RS19470 +0.4 1.3 DNA-binding response regulator compare
BWI76_RS22855 +0.4 1.7 hypothetical protein compare
BWI76_RS24720 +0.4 0.6 hypothetical protein compare
BWI76_RS25930 +0.4 2.2 glutathione-regulated potassium-efflux system protein KefB compare
BWI76_RS16300 +0.4 1.6 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS13850 +0.4 2.1 N-acetyltransferase compare
BWI76_RS12790 +0.4 0.8 lactate dehydrogenase compare
BWI76_RS11780 +0.4 1.4 2-deoxyglucose-6-phosphatase compare
BWI76_RS20155 +0.4 0.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS18430 +0.4 1.2 hypothetical protein compare
BWI76_RS15315 +0.4 1.4 DNA-binding protein compare
BWI76_RS26785 +0.4 2.6 UDP-forming cellulose synthase catalytic subunit compare
BWI76_RS02200 +0.4 1.2 phosphonate C-P lyase system protein PhnL compare
BWI76_RS08765 +0.4 1.3 8-amino-7-oxononanoate synthase compare
BWI76_RS10255 +0.4 2.1 dihydrodipicolinate synthase family protein compare
BWI76_RS12985 +0.4 1.0 transcriptional regulator compare
BWI76_RS08800 +0.4 2.2 phosphoethanolamine transferase EptA compare
BWI76_RS01690 +0.4 1.6 membrane protein compare
BWI76_RS13980 +0.4 0.9 hypothetical protein compare
BWI76_RS02020 +0.4 2.2 Na+/H+ antiporter compare
BWI76_RS16420 +0.4 1.6 anhydro-N-acetylmuramic acid kinase compare
BWI76_RS18130 +0.4 2.0 zinc ABC transporter substrate-binding protein compare
BWI76_RS19880 +0.4 2.1 magnesium transporter compare
BWI76_RS27745 +0.4 0.9 PTS sugar transporter subunit IIB compare
BWI76_RS23695 +0.4 2.1 deoxyribonyl-CoA synthetase (from data) compare
BWI76_RS19890 +0.4 1.1 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS15260 +0.4 0.9 hypothetical protein compare
BWI76_RS24890 +0.4 2.1 PTS system galactitol-specific transporter subunit IIC compare
BWI76_RS24330 +0.4 1.5 TIGR00156 family protein compare
BWI76_RS16665 +0.4 1.8 ABC transporter permease compare
BWI76_RS17765 +0.4 1.2 hypothetical protein compare
BWI76_RS14435 +0.4 0.9 glutamine ABC transporter ATP-binding protein compare
BWI76_RS24965 +0.4 1.1 SCP2 domain-containing protein compare
BWI76_RS18230 +0.4 1.5 trehalose-6-phosphate synthase compare
BWI76_RS05700 +0.4 2.1 coenzyme F420-dependent NADP oxidoreductase compare
BWI76_RS05630 +0.4 1.9 TonB-dependent siderophore receptor compare
BWI76_RS09765 +0.4 1.6 metalloprotease compare
BWI76_RS02805 +0.4 1.9 sugar ABC transporter permease compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms