Experiment set8IT036 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS11675 +1.0 2.9 arginine N-succinyltransferase compare
BWI76_RS11060 +0.8 2.5 septum formation inhibitor Maf compare
BWI76_RS18605 +0.8 1.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS23690 +0.8 2.0 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS08980 +0.8 1.7 DNA starvation/stationary phase protection protein compare
BWI76_RS05075 +0.8 1.4 type II secretion system protein GspG compare
BWI76_RS27605 +0.8 1.4 hypothetical protein compare
BWI76_RS20720 +0.8 1.8 hypothetical protein compare
BWI76_RS16075 +0.8 1.9 oxidoreductase compare
BWI76_RS07645 +0.8 1.4 short-chain dehydrogenase/reductase compare
BWI76_RS12170 +0.8 3.1 hypothetical protein compare
BWI76_RS16315 +0.7 1.5 SirA-like protein compare
BWI76_RS01565 +0.7 2.2 NADH pyrophosphatase compare
BWI76_RS07995 +0.7 3.0 twin-arginine translocase subunit TatA compare
BWI76_RS06190 +0.7 1.6 hypothetical protein compare
BWI76_RS03080 +0.7 3.4 (Fe-S)-cluster assembly protein compare
BWI76_RS27425 +0.7 1.5 DNA-directed RNA polymerase subunit omega compare
BWI76_RS07780 +0.7 1.5 hypothetical protein compare
BWI76_RS20000 +0.7 3.7 competence/damage-inducible protein A compare
BWI76_RS03295 +0.7 1.9 transposase compare
BWI76_RS10500 +0.7 2.6 flavoprotein monooxygenase compare
BWI76_RS14415 +0.7 1.5 transcriptional regulator, TetR family protein compare
BWI76_RS26150 +0.7 2.2 molecular chaperone Hsp33 compare
BWI76_RS17955 +0.7 1.7 hypothetical protein compare
BWI76_RS26095 +0.7 1.7 shikimate kinase compare
BWI76_RS06335 +0.7 2.3 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS08380 +0.7 1.7 endonuclease VIII compare
BWI76_RS09290 +0.7 1.4 phage Tail Protein X compare
BWI76_RS05235 +0.6 1.4 hypothetical protein compare
BWI76_RS16660 +0.6 2.2 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS04565 +0.6 2.1 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS22085 +0.6 1.7 L-valine transporter subunit YgaH compare
BWI76_RS01795 +0.6 3.6 hypothetical protein compare
BWI76_RS12420 +0.6 1.2 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS14065 +0.6 1.2 hypothetical protein compare
BWI76_RS01885 +0.6 1.2 CsbD family protein compare
BWI76_RS22815 +0.6 4.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12225 +0.6 1.9 hypothetical protein compare
BWI76_RS04605 +0.6 1.4 thiamine ABC transporter ATP-binding protein compare
BWI76_RS02655 +0.6 1.8 hypothetical protein compare
BWI76_RS05655 +0.6 2.3 hypothetical protein compare
BWI76_RS24925 +0.6 1.5 DnaA initiator-associating protein DiaA compare
BWI76_RS08765 +0.6 2.3 8-amino-7-oxononanoate synthase compare
BWI76_RS01775 +0.6 1.1 hypothetical protein compare
BWI76_RS15285 +0.6 2.0 stress protection protein MarC compare
BWI76_RS27745 +0.6 1.9 PTS sugar transporter subunit IIB compare
BWI76_RS21130 +0.6 1.0 Fe-S assembly protein IscX compare
BWI76_RS17470 +0.6 2.3 MerR family transcriptional regulator compare
BWI76_RS06325 +0.6 1.4 hypothetical protein compare
BWI76_RS13785 +0.6 1.5 ABC transporter permease compare
BWI76_RS18335 +0.6 3.6 DNA-binding response regulator compare
BWI76_RS06635 +0.6 1.7 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS26485 +0.6 3.5 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS20360 +0.6 1.1 cell division protein DedD compare
BWI76_RS14505 +0.6 0.9 salicylate synthase Irp9 compare
BWI76_RS23125 +0.6 1.4 propanediol dehydratase small subunit compare
BWI76_RS00415 +0.6 2.9 glucose-1-phosphatase compare
BWI76_RS11190 +0.5 1.9 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS10760 +0.5 1.9 nitroreductase family protein compare
BWI76_RS11680 +0.5 1.5 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS17370 +0.5 1.3 nitrate transporter NasD compare
BWI76_RS21460 +0.5 1.4 translation inhibitor protein RaiA compare
BWI76_RS20750 +0.5 1.0 carboxysome structural protein EutK compare
BWI76_RS01995 +0.5 1.2 AraC family transcriptional regulator compare
BWI76_RS18070 +0.5 2.3 DNA polymerase III subunit epsilon compare
BWI76_RS26480 +0.5 2.8 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS16420 +0.5 2.2 anhydro-N-acetylmuramic acid kinase compare
BWI76_RS09450 +0.5 1.7 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS25655 +0.5 1.3 DNA topoisomerase type IA zn finger domain-containing protein compare
BWI76_RS19010 +0.5 1.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS12495 +0.5 1.4 2-Cys peroxiredoxin compare
BWI76_RS10345 +0.5 4.4 MFS transporter compare
BWI76_RS16895 +0.5 0.7 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS12070 +0.5 1.0 hypothetical protein compare
BWI76_RS17330 +0.5 2.0 nitrate reductase subunit beta compare
BWI76_RS11255 +0.5 1.3 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS18770 +0.5 1.0 DNA gyrase inhibitor compare
BWI76_RS07855 +0.5 1.9 PucR family transcriptional regulator compare
BWI76_RS05915 +0.5 2.2 helix-turn-helix transcriptional regulator compare
BWI76_RS13130 +0.5 1.8 phenylacetic acid degradation protein PaaD compare
BWI76_RS27770 +0.5 1.5 hypothetical protein compare
BWI76_RS27455 +0.5 2.1 DUF805 domain-containing protein compare
BWI76_RS10350 +0.5 3.7 EamA family transporter compare
BWI76_RS25000 +0.5 0.7 malonate decarboxylase acyl carrier protein compare
BWI76_RS15825 +0.5 0.9 hypothetical protein compare
BWI76_RS05965 +0.5 1.6 hypothetical protein compare
BWI76_RS16425 +0.5 1.0 hypothetical protein compare
BWI76_RS22235 +0.5 1.6 transcriptional regulator GutM compare
BWI76_RS07985 +0.5 0.8 fluoride ion transporter CrcB compare
BWI76_RS03285 +0.5 2.5 hypothetical protein compare
BWI76_RS16905 +0.5 1.6 acetaldehyde dehydrogenase (acetylating) compare
BWI76_RS17530 +0.5 1.7 hypothetical protein compare
BWI76_RS24480 +0.5 3.1 undecaprenyl-diphosphatase compare
BWI76_RS00075 +0.5 1.2 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS17920 +0.5 2.2 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS05045 +0.5 1.3 general secretion pathway protein GspM compare
BWI76_RS26855 +0.5 1.7 cellulose synthase operon protein YhjQ compare
BWI76_RS09825 +0.5 3.3 envelope biogenesis factor ElyC compare
BWI76_RS14840 +0.5 1.2 hypothetical protein compare
BWI76_RS25305 +0.5 1.7 TIGR01212 family radical SAM protein compare
BWI76_RS14740 +0.5 1.9 LysR family transcriptional regulator compare
BWI76_RS17045 +0.5 1.1 hypothetical protein compare
BWI76_RS24575 +0.5 0.5 hypothetical protein compare
BWI76_RS11430 +0.5 0.8 lipoprotein compare
BWI76_RS08875 +0.5 3.5 multidrug ABC transporter ATP-binding protein compare
BWI76_RS12980 +0.4 2.3 AraC family transcriptional regulator compare
BWI76_RS24785 +0.4 1.6 DUF805 domain-containing protein compare
BWI76_RS23470 +0.4 3.8 hypothetical protein compare
BWI76_RS26580 +0.4 3.1 universal stress protein A compare
BWI76_RS26980 +0.4 1.4 cold-shock protein compare
BWI76_RS22515 +0.4 1.8 acyl dehydratase compare
BWI76_RS18350 +0.4 2.3 L-cystine ABC transporter ATP-binding protein YecC compare
BWI76_RS20465 +0.4 1.1 hypothetical protein compare
BWI76_RS02635 +0.4 1.2 3-keto-L-gulonate-6-phosphate decarboxylase compare
BWI76_RS26285 +0.4 1.2 glycerophosphodiester phosphodiesterase compare
BWI76_RS27200 +0.4 1.2 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS15015 +0.4 1.0 DUF2132 domain-containing protein compare
BWI76_RS20230 +0.4 1.1 hypothetical protein compare
BWI76_RS20380 +0.4 0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS17615 +0.4 0.6 RNA pseudouridine synthase compare
BWI76_RS19310 +0.4 1.3 ABC transporter permease compare
BWI76_RS14390 +0.4 1.0 hypothetical protein compare
BWI76_RS07165 +0.4 1.3 hypothetical protein compare
BWI76_RS17410 +0.4 2.5 sodium-potassium/proton antiporter ChaA compare
BWI76_RS01170 +0.4 2.1 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS23895 +0.4 0.5 Xaa-Pro aminopeptidase compare
BWI76_RS10040 +0.4 1.2 heat-shock protein HspQ compare
BWI76_RS16910 +0.4 0.7 2-keto-4-pentenoate hydratase compare
BWI76_RS10890 +0.4 1.5 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS21675 +0.4 1.1 hypothetical protein compare
BWI76_RS18015 +0.4 3.0 serine/threonine-protein phosphatase compare
BWI76_RS22435 +0.4 1.7 iron ABC transporter permease AfeC compare
BWI76_RS08310 +0.4 1.3 potassium-transporting ATPase subunit C compare
BWI76_RS00880 +0.4 1.6 membrane protein compare
BWI76_RS02880 +0.4 2.2 membrane protein compare
BWI76_RS05005 +0.4 1.5 polynucleotide adenylyltransferase compare
BWI76_RS25510 +0.4 1.6 oxidoreductase compare
BWI76_RS23335 +0.4 2.8 GNAT family acetyltransferase compare
BWI76_RS23505 +0.4 3.5 ferrous iron transporter B compare
BWI76_RS18420 +0.4 2.5 DNA (cytosine-5-)-methyltransferase compare
BWI76_RS09100 +0.4 1.6 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS13220 +0.4 2.1 N-acetyltransferase compare
BWI76_RS17805 +0.4 0.8 membrane protein compare
BWI76_RS15530 +0.4 1.6 hypothetical protein compare
BWI76_RS20245 +0.4 1.7 transketolase subunit B compare
BWI76_RS20430 +0.4 1.5 penicillin-insensitive murein endopeptidase compare
BWI76_RS26015 +0.4 1.4 DUF2559 domain-containing protein compare
BWI76_RS12750 +0.4 1.2 hypothetical protein compare
BWI76_RS23580 +0.4 1.7 hypothetical protein compare
BWI76_RS11350 +0.4 1.7 DeoR family transcriptional regulator compare
BWI76_RS05520 +0.4 1.5 hypothetical protein compare
BWI76_RS10380 +0.4 0.8 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS22695 +0.4 1.7 sulfate adenylyltransferase compare
BWI76_RS13745 +0.4 1.5 formate dehydrogenase subunit beta compare
BWI76_RS10770 +0.4 1.1 pyrimidine utilization protein C compare
BWI76_RS13470 +0.4 1.4 transporter compare
BWI76_RS16335 +0.4 1.0 division septum protein Blr compare
BWI76_RS13425 +0.4 2.6 1-pyrroline dehydrogenase compare
BWI76_RS21445 +0.4 1.8 hypothetical protein compare
BWI76_RS09045 +0.4 2.4 alpha-glucosidase compare
BWI76_RS23595 +0.4 1.5 N-acetyltransferase compare
BWI76_RS26130 +0.4 1.5 ADP compounds hydrolase NudE compare
BWI76_RS26325 +0.4 1.8 altronate hydrolase compare
BWI76_RS07465 +0.4 1.6 TetR family transcriptional regulator compare
BWI76_RS27900 +0.4 1.4 DNA damage-inducible protein D compare
BWI76_RS19550 +0.4 2.4 phospho-cellobiase compare
BWI76_RS26475 +0.4 2.5 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS13170 +0.4 1.3 methyltransferase compare
BWI76_RS27005 +0.4 1.5 hypothetical protein compare
BWI76_RS09695 +0.4 1.3 MFS transporter compare
BWI76_RS10255 +0.4 1.0 dihydrodipicolinate synthase family protein compare
BWI76_RS16510 +0.4 1.9 transcriptional repressor PurR compare
BWI76_RS04180 +0.4 2.5 hypothetical protein compare
BWI76_RS18495 +0.4 2.3 hypothetical protein compare
BWI76_RS16300 +0.4 1.8 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS24585 +0.4 1.5 glycerol dehydrogenase compare
BWI76_RS25850 +0.4 1.8 prepilin peptidase compare
BWI76_RS07805 +0.4 1.7 sugar ABC transporter permease compare
BWI76_RS13025 +0.4 1.7 histidine phosphatase family protein compare
BWI76_RS08705 +0.4 1.8 putative LuxR family regulatory protein compare
BWI76_RS03180 +0.4 1.6 phage transcriptional regulator, AlpA compare
BWI76_RS16120 +0.4 0.8 4-carboxymuconolactone decarboxylase compare
BWI76_RS17375 +0.4 0.7 nitrate ABC transporter, permease protein compare
BWI76_RS05445 +0.4 1.4 type 11 methyltransferase compare
BWI76_RS13250 +0.4 0.7 cytochrome b561 compare
BWI76_RS07600 +0.4 1.9 aspartate aminotransferase family protein compare
BWI76_RS18425 +0.4 0.9 phosphohydrolase compare
BWI76_RS13590 +0.4 1.5 hypothetical protein compare
BWI76_RS26730 +0.4 1.4 inner membrane protein YhjD compare
BWI76_RS17895 +0.4 1.4 PTS mannose/fructose/sorbose transporter subunit IIC compare
BWI76_RS06080 +0.4 1.3 taurine dioxygenase compare
BWI76_RS06205 +0.4 1.2 recombination-associated protein RdgC compare
BWI76_RS26215 +0.4 1.9 glycogen-branching enzyme compare
BWI76_RS13195 +0.4 1.8 glutamate dehydrogenase compare
BWI76_RS09975 +0.4 1.9 cell division inhibitor SulA compare
BWI76_RS15125 +0.4 1.8 acetyltransferase compare
BWI76_RS07795 +0.4 1.8 oxidoreductase compare
BWI76_RS24225 +0.4 1.0 hypothetical protein compare
BWI76_RS17570 +0.4 0.5 iron-sulfur-binding protein compare
BWI76_RS23305 +0.4 1.6 NADP(H)-dependent aldo-keto reductase compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms