Experiment set8IT036 for Caulobacter crescentus NA1000

Compare to:

PYE with CHIR-090 2 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03918 +1.5 3.1 hypothetical protein compare
CCNA_01910 +1.4 2.9 ABC transporter substrate-binding protein compare
CCNA_02000 +1.3 2.4 SSU ribosomal protein S2P compare
CCNA_02534 +1.1 2.5 hypothetical protein compare
CCNA_00147 +1.1 1.6 hypothetical protein compare
CCNA_00409 +1.0 1.8 hypothetical protein compare
CCNA_01270 +0.9 2.3 hypothetical protein compare
CCNA_03070 +0.8 2.2 4-oxalocrotonate tautomerase compare
CCNA_02010 +0.8 1.5 hypothetical protein compare
CCNA_03635 +0.8 1.6 hypothetical protein compare
CCNA_01712 +0.8 3.8 CopY/TcrY family transcriptional repressor compare
CCNA_02242 +0.7 4.1 PHB granule-associated protein, phasin2 compare
CCNA_02942 +0.7 2.3 nucleoside-diphosphate-sugar epimerase compare
CCNA_01942 +0.7 3.0 Rrf2 family protein compare
CCNA_03944 +0.7 0.9 hypothetical protein compare
CCNA_01804 +0.7 4.4 glutathione peroxidase compare
CCNA_01058 +0.7 4.0 helix-turn-helix transcriptional regulator compare
CCNA_01913 +0.7 5.1 MarR-family transcriptional regulator compare
CCNA_01716 +0.7 1.5 hypothetical protein compare
CCNA_03252 +0.7 3.8 CopY/TcrY-family transcriptional regulator compare
CCNA_01939 +0.6 2.8 ADP-ribosylglycohydrolase compare
CCNA_03951 +0.6 3.4 hypothetical protein compare
CCNA_03762 +0.6 2.5 acetolactate synthase-related protein compare
CCNA_02330 +0.6 2.7 hypothetical protein compare
CCNA_01849 +0.6 4.1 quinol cytochrome oxidase polypeptide III compare
CCNA_R0054 +0.6 1.6 tRNA-Gly compare
CCNA_01178 +0.6 2.6 conserved hypothetical protein, DUF934 compare
CCNA_01578 +0.6 3.5 beta-lactamase repressor compare
CCNA_01968 +0.6 1.9 pentapeptide repeats containing protein compare
CCNA_01840 +0.6 4.6 MerR-family transcriptional regulator compare
CCNA_01094 +0.6 2.3 hypothetical protein compare
CCNA_01979 +0.6 2.5 LexA repressor compare
CCNA_01276 +0.6 1.4 cytochrome c5 compare
CCNA_02984 +0.6 3.0 hypothetical protein compare
CCNA_00765 +0.6 3.1 hypothetical protein compare
CCNA_01801 +0.6 3.0 hypothetical protein compare
CCNA_01541 +0.6 4.3 LysR-family transcriptional regulator compare
CCNA_01405 +0.6 2.2 GIY-YIG domain protein compare
CCNA_01729 +0.6 1.4 transporter, sodium/bile acid symporter family compare
CCNA_02124 +0.6 2.8 hypothetical protein compare
CCNA_01333 +0.6 3.4 hypothetical protein compare
CCNA_02040 +0.6 1.2 phosphoserine phosphatase compare
CCNA_01779 +0.6 1.7 hypothetical protein compare
CCNA_00347 +0.6 1.7 hypothetical protein compare
CCNA_01074 +0.6 1.9 entericidin B-like protein compare
CCNA_01677 +0.6 3.5 carboxypeptidase G2 precursor compare
CCNA_00109 +0.6 4.1 thioredoxin compare
CCNA_03809 +0.6 3.3 organic solvent resistance transport system permease compare
CCNA_02997 +0.5 2.8 cold shock protein CspA compare
CCNA_02180 +0.5 0.9 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_01505 +0.5 1.5 hypothetical protein compare
CCNA_00919 +0.5 2.4 hypothetical protein compare
CCNA_01453 +0.5 1.9 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_03829 +0.5 2.7 hypothetical protein compare
CCNA_02297 +0.5 3.2 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01850 +0.5 4.2 quinol cytochrome oxidase polypeptide I compare
CCNA_00643 +0.5 1.4 hypothetical protein compare
CCNA_01255 +0.5 2.4 hypothetical protein compare
CCNA_00895 +0.5 3.0 hypothetical protein compare
CCNA_01338 +0.5 2.8 glyoxalase family protein compare
CCNA_00769 +0.5 3.6 TetR family transcriptional regulator compare
CCNA_03132 +0.5 2.3 transcriptional regulator, antitoxin protein higA compare
CCNA_02931 +0.5 2.1 flgE-related flagellar hook protein compare
CCNA_01041 +0.5 2.0 hypothetical protein compare
CCNA_03970 +0.5 1.8 hypothetical protein compare
CCNA_01129 +0.5 2.3 flagellar biosynthesis protein FliQ compare
CCNA_03929 +0.5 1.7 hypothetical protein compare
CCNA_02878 +0.5 0.8 hypothetical protein compare
CCNA_02248 +0.5 0.7 hypothetical protein compare
CCNA_03479 +0.5 3.5 MarR-family transcriptional regulator compare
CCNA_01655 +0.5 3.0 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01948 +0.5 2.8 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00845 +0.5 2.8 antitoxin protein relB-1 compare
CCNA_01728 +0.5 2.9 short chain dehydrogenase compare
CCNA_00929 +0.5 3.7 Riboflavin-specific deaminase family protein compare
CCNA_01186 +0.5 2.5 hypothetical protein compare
CCNA_01975 +0.5 3.0 anthranilate phosphoribosyltransferase compare
CCNA_03349 +0.5 1.3 hypothetical protein compare
CCNA_01820 +0.5 3.3 GTP-binding protein hflX compare
CCNA_02225 +0.5 2.8 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_02551 +0.5 2.2 hypothetical protein compare
CCNA_03818 +0.5 1.9 hypothetical protein compare
CCNA_01790 +0.5 1.7 protein translocase subunit secG compare
CCNA_00255 +0.5 0.7 esterase compare
CCNA_03911 +0.5 1.7 hypothetical protein compare
CCNA_00023 +0.5 2.2 putative periplasmic protein compare
CCNA_01745 +0.5 2.8 thioredoxin peroxidase compare
CCNA_01967 +0.5 1.7 hypothetical protein with pentapeptide repeats compare
CCNA_02338 +0.5 3.0 hypothetical protein compare
CCNA_02379 +0.5 3.0 hypothetical protein compare
CCNA_02067 +0.5 2.4 conserved membrane spanning protein compare
CCNA_01851 +0.5 3.6 quinol cytochrome oxidase polypeptide II compare
CCNA_02241 +0.5 1.8 endoribonuclease L-PSP compare
CCNA_01134 +0.5 2.3 LuxR-family transcriptional regulator compare
CCNA_03555 +0.5 3.2 esterase lipase family protein compare
CCNA_00518 +0.5 2.3 LSU ribosomal protein L25P compare
CCNA_03893 +0.5 1.2 hypothetical protein compare
CCNA_01684 +0.5 2.6 phenylalanine-4-hydroxylase compare
CCNA_01175 +0.5 2.3 uroporphyrin-III C-methyltransferase compare
CCNA_01248 +0.5 2.7 TetR-family transcriptional regulator compare
CCNA_00129 +0.5 2.1 hypothetical protein compare
CCNA_00311 +0.4 3.3 Zn-dependent protease family protein compare
CCNA_02025 +0.4 1.7 hypothetical protein compare
CCNA_02601 +0.4 3.5 glutathione-dependent formaldehyde dehydrogenase compare
CCNA_00189 +0.4 1.0 zinc-finger domain protein compare
CCNA_01778 +0.4 3.2 penicillin-binding protein compare
CCNA_03123 +0.4 2.7 ArsR-family transcriptional regulator compare
CCNA_00153 +0.4 1.8 adenine nucleotide exchange factor GrpE compare
CCNA_02597 +0.4 1.9 hypothetical protein compare
CCNA_01575 +0.4 3.5 glucose / sorbosone dehydrogenase compare
CCNA_01528 +0.4 2.9 flagellin fljK compare
CCNA_01752 +0.4 2.1 YicC-family protein compare
CCNA_01531 +0.4 3.4 acetyltransferase compare
CCNA_00931 +0.4 3.2 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_02004 +0.4 1.0 SOS-induced inhibitor of cell division SidA compare
CCNA_00706 +0.4 2.5 hypothetical protein compare
CCNA_03913 +0.4 0.5 hypothetical protein compare
CCNA_03078 +0.4 0.8 Arc/MetJ-family transcriptional regulator compare
CCNA_01680 +0.4 3.3 succinylarginine dihydrolase compare
CCNA_01286 +0.4 1.8 hypothetical protein compare
CCNA_00930 +0.4 3.1 riboflavin synthase alpha chain compare
CCNA_00946 +0.4 2.8 Basal-body rod modification protein FlgD compare
CCNA_00425 +0.4 1.3 hypothetical protein compare
CCNA_03808 +0.4 3.3 organic solvent resistance transport system Ttg2C protein compare
CCNA_01848 +0.4 3.0 quinol cytochrome oxidase polypeptide IV compare
CCNA_01437 +0.4 1.0 transglycosylase associated protein compare
CCNA_01484 +0.4 1.1 DNA Ligase IV adenylation domain protein compare
CCNA_03107 +0.4 2.5 cytidine deaminase compare
CCNA_01480 +0.4 1.1 hypothetical protein compare
CCNA_02452 +0.4 2.0 hypothetical protein compare
CCNA_02805 +0.4 1.8 hypothetical protein compare
CCNA_01393 +0.4 3.7 soluble lytic murein transglycosylase compare
CCNA_02617 +0.4 3.2 histidinol-phosphate aminotransferase compare
CCNA_01824 +0.4 2.4 hypothetical protein compare
CCNA_00495 +0.4 1.7 putative membrane protein insertion efficiency factor YidD compare
CCNA_03940 +0.4 2.1 hypothetical protein compare
CCNA_03669 +0.4 1.6 outer membrane protein compare
CCNA_01501 +0.4 1.1 protein kinase C-like superfamily protein compare
CCNA_02249 +0.4 2.1 conserved hypothetical cytosolic protein compare
CCNA_03216 +0.4 1.8 hypothetical protein compare
CCNA_03973 +0.4 1.0 hypothetical protein compare
CCNA_01748 +0.4 2.7 methyltransferase compare
CCNA_03938 +0.4 1.5 hypothetical protein compare
CCNA_03114 +0.4 1.6 hypothetical protein compare
CCNA_01964 +0.4 0.6 NADH dehydrogenase compare
CCNA_00834 +0.4 2.7 flagellin FljM compare
CCNA_00149 +0.4 1.2 Cro/CI-family transcriptional regulator compare
CCNA_01344 +0.4 2.7 hypothetical protein compare
CCNA_01335 +0.4 2.7 ABC-type multidrug transport system, ATPase component compare
CCNA_03955 +0.4 0.6 hypothetical protein compare
CCNA_03196 +0.4 1.6 hypothetical protein compare
CCNA_01520 +0.4 1.2 hypothetical protein compare
CCNA_02695 +0.4 1.9 hypothetical protein compare
CCNA_00107 +0.4 1.3 Trm112p-like protein compare
CCNA_00811 +0.4 2.2 TetR-family transcriptional regulator compare
CCNA_00625 +0.4 2.6 two-component receiver domain protein compare
CCNA_02657 +0.4 2.5 hypothetical protein compare
CCNA_01949 +0.4 1.1 bactofilin A BacA compare
CCNA_00860 +0.4 1.1 holdfast inhibitor protein HfiA compare
CCNA_00703 +0.4 1.5 hypothetical protein compare
CCNA_02703 +0.4 1.5 5-hydroxyisourate hydrolase compare
CCNA_01847 +0.4 2.9 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02073 +0.4 1.7 cupin domain transcriptional regulator compare
CCNA_00269 +0.4 2.5 YbaB/EbfC-family DNA-binding protein compare
CCNA_02367 +0.4 2.9 CelR-family transcriptional regulator compare
CCNA_03975 +0.4 2.1 hypothetical protein compare
CCNA_01267 +0.4 2.1 NTF2 superfamily protein compare
CCNA_02567 +0.4 2.8 sensory transduction histidine kinase pleC compare
CCNA_02544 +0.4 1.8 hypothetical protein compare
CCNA_02892 +0.4 0.7 hypothetical protein compare
CCNA_01413 +0.4 2.3 phosphoglycerate mutase family protein compare
CCNA_01926 +0.4 1.8 GGDEF diguanylate cyclase DgcB compare
CCNA_01530 +0.4 2.8 flagellin FljJ compare
CCNA_01629 +0.4 2.3 signal peptidase I compare
CCNA_03961 +0.4 1.7 hypothetical protein compare
CCNA_01931 +0.4 2.9 TetR-family transcriptional regulator compare
CCNA_02619 +0.4 3.1 stomatin/prohibitin-related protein compare
CCNA_01527 +0.4 2.8 flagellin fljL compare
CCNA_00962 +0.4 1.7 MarR-family transcriptional regulator compare
CCNA_03325 +0.4 2.5 hypothetical protein compare
CCNA_02341 +0.4 1.7 small heat shock protein compare
CCNA_01777 +0.4 2.6 hybrid sensor histidine kinase/receiver domain protein compare
CCNA_00887 +0.4 1.7 hypothetical protein compare
CCNA_02348 +0.4 1.4 acetyltransferase, GNAT family compare
CCNA_01802 +0.4 0.8 hypothetical protein compare
CCNA_02608 +0.4 2.0 hypothetical protein compare
CCNA_03176 +0.4 1.0 nucleotidyltransferase compare
CCNA_01602 +0.4 1.7 glutathione S-transferase compare
CCNA_00954 +0.4 2.8 AAA-family response regulator flbD compare
CCNA_01678 +0.4 2.3 arginine N-succinyltransferase, beta chain compare
CCNA_02133 +0.4 1.4 glucokinase compare
CCNA_01266 +0.4 2.3 NTF2 superfamily protein compare
CCNA_03989 +0.4 2.8 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00369 +0.4 2.9 magnesium and cobalt efflux protein corC-like protein compare
CCNA_01235 +0.4 2.1 AcrR-family transcriptional regulator compare
CCNA_02063 +0.4 1.3 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_00108 +0.4 2.4 lon endopeptidase-related protein compare
CCNA_02983 +0.4 2.5 polyprenyl-phosphate beta-D-glucosyltransferase compare
CCNA_03806 +0.4 2.7 outer membrane lipoprotein compare
CCNA_03522 +0.4 2.8 Zn-dependent protease TldD compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress CHIR-090 across organisms