Experiment set8IT032 for Pseudomonas fluorescens FW300-N2E2

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L-Leucine carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_2194 -6.0 -5.8 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) conserved
Pf6N2E2_2192 -4.9 -9.3 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) conserved
Pf6N2E2_480 -4.6 -12.7 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) conserved
Pf6N2E2_2191 -4.3 -15.8 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) conserved
Pf6N2E2_2193 -4.2 -8.3 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) conserved
Pf6N2E2_481 -4.1 -7.8 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) conserved
Pf6N2E2_3580 -2.5 -11.0 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) conserved
Pf6N2E2_3576 -2.4 -10.7 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) conserved
Pf6N2E2_3579 -2.3 -13.7 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) conserved
Pf6N2E2_2924 -2.2 -11.8 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) conserved
Pf6N2E2_634 -2.2 -10.8 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form conserved
Pf6N2E2_2923 -2.2 -9.5 ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) conserved
Pf6N2E2_3578 -2.1 -11.4 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) conserved
Pf6N2E2_2886 -2.1 -15.0 Phosphogluconate repressor HexR, RpiR family compare
Pf6N2E2_5274 -2.0 -7.2 FolM Alternative dihydrofolate reductase 1 conserved
Pf6N2E2_2926 -2.0 -5.1 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) conserved
Pf6N2E2_2696 -1.9 -10.6 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) conserved
Pf6N2E2_2921 -1.9 -9.1 ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) conserved
Pf6N2E2_2391 -1.8 -6.2 FIG137360: hypothetical protein conserved
Pf6N2E2_2732 -1.7 -5.7 Transcriptional regulator, LysR family compare
Pf6N2E2_3577 -1.7 -6.0 ABC transporter for L-leucine/L-isoleucine/D-alanine, ATPase component 1 LivG (from data) conserved
Pf6N2E2_5260 -1.4 -6.7 Phosphate acetyltransferase (EC 2.3.1.8) conserved
Pf6N2E2_4388 -1.4 -7.8 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) compare
Pf6N2E2_4024 -1.2 -5.4 L-Proline/Glycine betaine transporter ProP conserved
Pf6N2E2_1395 +1.4 7.0 Uncharacterized conserved protein compare
Pf6N2E2_1397 +1.4 8.9 ABC transporter permease protein compare
Pf6N2E2_1386 +1.5 7.0 amino acid ABC transporter, periplasmic substrate-binding protein compare
Pf6N2E2_1382 +1.7 11.8 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8) conserved
Pf6N2E2_1100 +2.6 15.4 L-rhamnose operon transcriptional activator RhaR conserved
Pf6N2E2_1101 +2.8 12.1 Transporter, LysE family conserved


Specific phenotypes for carbon source L-Leucine across organisms