Experiment set8IT032 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS04160 -9.6 -6.6 phosphoserine phosphatase compare
BWI76_RS21475 -9.5 -6.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18950 -9.2 -5.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18940 -8.3 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04255 -8.0 -7.8 threonine synthase compare
BWI76_RS18920 -7.9 -4.7 ATP phosphoribosyltransferase compare
BWI76_RS04470 -7.8 -7.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS04645 -7.7 -5.3 3-dehydroquinase compare
BWI76_RS24285 -7.6 -8.4 cystathionine beta-lyase compare
BWI76_RS23220 -7.5 -9.7 amino-acid N-acetyltransferase compare
BWI76_RS00805 -7.3 -5.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS20965 -7.3 -4.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08385 -7.2 -3.4 citrate (Si)-synthase compare
BWI76_RS09645 -6.9 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS05015 -6.8 -4.2 transcriptional regulator compare
BWI76_RS11860 -6.7 -9.1 anthranilate synthase component I compare
BWI76_RS04670 -6.6 -11.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04465 -6.6 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20895 -6.6 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20350 -6.6 -6.9 amidophosphoribosyltransferase compare
BWI76_RS26085 -6.4 -3.4 3-dehydroquinate synthase compare
BWI76_RS00855 -6.3 -5.7 argininosuccinate lyase compare
BWI76_RS07070 -6.2 -6.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25320 -6.2 -8.8 glutamate synthase compare
BWI76_RS04250 -6.1 -7.0 homoserine kinase compare
BWI76_RS01610 -6.0 -8.5 phosphoribosylamine--glycine ligase compare
BWI76_RS00850 -6.0 -7.5 acetylglutamate kinase compare
BWI76_RS04245 -6.0 -16.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS05840 -5.9 -7.2 glutamate 5-kinase compare
BWI76_RS04665 -5.9 -17.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04685 -5.8 -11.1 putative leucine operon leader peptide compare
BWI76_RS20355 -5.7 -4.0 colicin V production protein compare
BWI76_RS18935 -5.7 -6.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11965 -5.5 -3.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00845 -5.5 -7.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23365 -5.5 -5.0 LysR family transcriptional regulator compare
BWI76_RS18930 -5.4 -4.3 histidinol-phosphate transaminase compare
BWI76_RS03010 -5.4 -8.3 ornithine carbamoyltransferase compare
BWI76_RS00965 -5.3 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS01615 -5.3 -8.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11850 -5.3 -5.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11840 -5.2 -4.6 tryptophan synthase subunit alpha compare
BWI76_RS23920 -5.2 -5.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS11855 -5.2 -4.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04675 -5.2 -6.4 3-isopropylmalate dehydrogenase compare
BWI76_RS21265 -5.1 -9.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS13920 -5.1 -5.9 magnesium-translocating P-type ATPase compare
BWI76_RS00980 -5.1 -9.5 PLP-dependent threonine dehydratase compare
BWI76_RS00385 -5.1 -8.3 nitrogen assimilation regulatory protein compare
BWI76_RS09755 -5.1 -10.0 phosphoserine transaminase compare
BWI76_RS11845 -5.0 -2.6 tryptophan synthase subunit beta compare
BWI76_RS00990 -4.9 -7.0 ketol-acid reductoisomerase compare
BWI76_RS04680 -4.9 -10.1 2-isopropylmalate synthase compare
BWI76_RS02995 -4.8 -6.3 aspartate carbamoyltransferase compare
BWI76_RS00975 -4.8 -8.0 dihydroxy-acid dehydratase compare
BWI76_RS25315 -4.8 -9.1 glutamate synthase large subunit compare
BWI76_RS09760 -4.8 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25115 -4.7 -5.8 argininosuccinate synthase compare
BWI76_RS17720 -4.6 -1.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05200 -4.6 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS01655 -4.6 -5.3 homoserine O-succinyltransferase compare
BWI76_RS25645 -4.5 -7.4 shikimate dehydrogenase compare
BWI76_RS23360 -4.5 -4.4 diaminopimelate decarboxylase compare
BWI76_RS22755 -4.5 -7.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00400 -4.5 -2.4 glutamine synthetase compare
BWI76_RS07065 -4.4 -6.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05835 -4.3 -2.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS00835 -4.3 -11.3 phosphoenolpyruvate carboxylase compare
BWI76_RS01200 -4.2 -3.5 diaminopimelate epimerase compare
BWI76_RS22760 -4.2 -8.6 sulfite reductase subunit beta compare
BWI76_RS20435 -4.2 -1.8 chorismate synthase compare
BWI76_RS23240 -4.1 -2.9 exonuclease V subunit gamma compare
BWI76_RS00390 -4.1 -6.4 two-component system sensor histidine kinase NtrB compare
BWI76_RS09910 -4.1 -13.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS25065 -4.0 -3.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS21465 -3.9 -2.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS20650 -3.9 -2.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS22765 -3.9 -12.0 sulfite reductase subunit alpha compare
BWI76_RS18925 -3.7 -3.5 histidinol dehydrogenase compare
BWI76_RS26055 -3.7 -6.6 siroheme synthase compare
BWI76_RS12465 -3.7 -1.6 phage shock protein D compare
BWI76_RS15115 -3.6 -6.7 MFS transporter compare
BWI76_RS27430 -3.5 -1.5 (p)ppGpp synthetase compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS18955 -3.5 -5.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS15225 -3.5 -2.6 DeoR family transcriptional regulator compare
BWI76_RS23230 -3.5 -2.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS21580 -3.5 -2.5 SsrA-binding protein compare
BWI76_RS01275 -3.5 -4.8 LysR family transcriptional regulator compare
BWI76_RS06525 -3.4 -6.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS04510 -3.4 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS27385 -3.3 -5.0 orotate phosphoribosyltransferase compare
BWI76_RS04240 -3.3 -3.2 thr operon leader peptide compare
BWI76_RS17975 -3.2 -4.7 tail-specific protease compare
BWI76_RS00785 -3.2 -5.9 cystathionine gamma-synthase compare
BWI76_RS27390 -3.1 -4.2 ribonuclease PH compare
BWI76_RS00960 -3.0 -5.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00180 -2.9 -1.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS22690 -2.9 -1.8 adenylyl-sulfate kinase compare
BWI76_RS26570 -2.8 -2.9 anion permease compare
BWI76_RS00345 -2.8 -4.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS10990 -2.7 -3.2 dihydroorotase compare
BWI76_RS17370 -2.7 -2.6 nitrate transporter NasD compare
BWI76_RS26620 -2.6 -1.4 Fe-S biogenesis protein NfuA compare
BWI76_RS02735 -2.6 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS07475 -2.5 -1.3 DNA-binding transcriptional regulator RamA compare
BWI76_RS23480 -2.4 -11.1 EAL domain-containing protein compare
BWI76_RS13915 -2.4 -4.5 magnesium transport protein MgtC compare
BWI76_RS09655 -2.4 -3.0 leucine-responsive regulatory protein compare
BWI76_RS01330 -2.4 -4.3 twin-arginine translocase subunit TatC compare
BWI76_RS01280 -2.4 -7.8 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS21140 -2.4 -2.1 molecular chaperone HscA compare
BWI76_RS25060 -2.3 -5.0 lipoprotein NlpI compare
BWI76_RS05120 -2.3 -5.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS00985 -2.3 -5.5 transcriptional regulator IlvY compare
BWI76_RS17365 -2.3 -7.1 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS01210 -2.2 -1.4 tyrosine recombinase XerC compare
BWI76_RS01550 -2.2 -3.6 thiamine phosphate synthase compare
BWI76_RS06530 -2.2 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS02530 -2.1 -2.2 tRNA dimethylallyltransferase compare
BWI76_RS04705 -2.1 -4.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS17980 -2.1 -3.3 RNA chaperone ProQ compare
BWI76_RS02410 -2.1 -2.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS27305 -2.1 -4.3 glycosyl transferase compare
BWI76_RS24400 -2.1 -6.2 outer membrane channel protein TolC compare
BWI76_RS08760 -2.0 -4.4 biotin synthase compare
BWI76_RS06765 -2.0 -2.2 transcriptional regulator compare
BWI76_RS05450 -2.0 -1.9 ribonuclease HI compare
BWI76_RS08765 -1.9 -1.8 8-amino-7-oxononanoate synthase compare
BWI76_RS20440 -1.9 -1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23070 -1.9 -6.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS12420 -1.9 -1.3 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS15660 -1.8 -1.1 hypothetical protein compare
BWI76_RS17385 -1.8 -5.6 nitrate regulatory protein compare
BWI76_RS25280 -1.8 -2.1 RNase adaptor protein RapZ compare
BWI76_RS26775 -1.8 -2.7 endo-1,4-D-glucanase compare
BWI76_RS19840 -1.8 -1.2 hypothetical protein compare
BWI76_RS19845 -1.7 -4.7 phosphatase compare
BWI76_RS25160 -1.7 -1.8 transcription elongation factor GreA compare
BWI76_RS20390 -1.7 -3.4 erythronate-4-phosphate dehydrogenase compare
BWI76_RS08180 -1.7 -5.2 asparagine synthase B compare
BWI76_RS15290 -1.6 -1.3 transcriptional regulator compare
BWI76_RS05005 -1.6 -2.4 polynucleotide adenylyltransferase compare
BWI76_RS17380 -1.6 -3.4 nitrate transporter component compare
BWI76_RS26000 -1.6 -6.1 aspartate aminotransferase family protein compare
BWI76_RS00355 -1.6 -1.3 DNA polymerase I compare
BWI76_RS10930 -1.6 -5.3 glucan biosynthesis protein G compare
BWI76_RS12090 -1.5 -2.1 HNH endonuclease compare
BWI76_RS15110 -1.5 -7.0 putative excinuclease ABC subunit A compare
BWI76_RS23265 -1.5 -2.4 hypothetical protein compare
BWI76_RS08925 -1.5 -3.2 DNA-binding protein YbiB compare
BWI76_RS01800 -1.5 -2.2 glucose-6-phosphate isomerase compare
BWI76_RS13595 -1.4 -2.5 transcriptional regulator compare
BWI76_RS26410 -1.4 -2.1 membrane protein compare
BWI76_RS22805 -1.4 -5.7 GTP diphosphokinase compare
BWI76_RS25600 -1.4 -0.9 tRNA-Thr compare
BWI76_RS12270 -1.4 -2.4 hypothetical protein compare
BWI76_RS09730 -1.4 -1.3 pyruvate formate lyase 1-activating protein compare
BWI76_RS27165 -1.3 -2.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS24025 -1.3 -4.3 agmatinase compare
BWI76_RS05570 -1.3 -1.1 hypothetical protein compare
BWI76_RS06770 -1.3 -5.2 Hha toxicity attenuator compare
BWI76_RS00380 -1.3 -4.2 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS10935 -1.3 -3.1 glucan biosynthesis glucosyltransferase H compare
BWI76_RS08520 -1.3 -1.5 colicin transporter TolQ compare
BWI76_RS08665 -1.3 -3.2 6-phosphogluconolactonase compare
BWI76_RS16535 -1.3 -6.8 MATE family efflux transporter compare
BWI76_RS15840 -1.3 -2.2 prophage protein compare
BWI76_RS19025 -1.3 -6.5 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS27455 -1.3 -2.5 DUF805 domain-containing protein compare
BWI76_RS17375 -1.3 -2.2 nitrate ABC transporter, permease protein compare
BWI76_RS25505 -1.3 -4.1 RNase E specificity factor CsrD compare
BWI76_RS25960 -1.2 -3.0 NUDIX hydrolase compare
BWI76_RS21165 -1.2 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS15850 -1.2 -0.7 DUF1317 domain-containing protein compare
BWI76_RS15215 -1.2 -1.1 N-acetyltransferase compare
BWI76_RS25920 -1.2 -1.2 peptidylprolyl isomerase compare
BWI76_RS17290 -1.2 -2.0 formyltetrahydrofolate deformylase compare
BWI76_RS08535 -1.2 -1.0 translocation protein TolB compare
BWI76_RS13435 -1.2 -1.4 hypothetical protein compare
BWI76_RS17565 -1.2 -1.2 hypothetical protein compare
BWI76_RS04305 -1.2 -0.9 molecular chaperone DnaJ compare
BWI76_RS18165 -1.2 -1.2 NUDIX pyrophosphatase compare
BWI76_RS00600 -1.1 -2.9 LacI family transcriptional regulator compare
BWI76_RS10530 -1.1 -1.7 GntR family transcriptional regulator with compare
BWI76_RS08775 -1.1 -5.2 dethiobiotin synthase compare
BWI76_RS19850 -1.1 -2.0 tRNA-Pro compare
BWI76_RS15060 -1.1 -2.5 MarR family transcriptional regulator compare
BWI76_RS06800 -1.1 -1.1 DUF2496 domain-containing protein compare
BWI76_RS06340 -1.1 -0.9 hypothetical protein compare
BWI76_RS17195 -1.1 -1.8 hypothetical protein compare
BWI76_RS03105 -1.1 -0.9 myo-inosose-2 dehydratase compare
BWI76_RS04715 -1.1 -1.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26075 -1.1 -2.5 DNA adenine methylase compare
BWI76_RS21350 -1.1 -2.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS16315 -1.1 -1.2 SirA-like protein compare
BWI76_RS01935 -1.1 -0.8 thiamin phosphate synthase compare
BWI76_RS01555 -1.1 -5.1 phosphomethylpyrimidine synthase ThiC compare
BWI76_RS23915 -1.0 -1.3 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS08770 -1.0 -2.4 malonyl-ACP O-methyltransferase BioC compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms