Experiment set8IT031 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -8.1 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20355 -7.4 -4.0 colicin V production protein compare
BWI76_RS09645 -7.0 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS26085 -6.5 -4.1 3-dehydroquinate synthase compare
BWI76_RS18920 -6.4 -5.5 ATP phosphoribosyltransferase compare
BWI76_RS04470 -6.4 -10.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS07070 -6.2 -6.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20895 -6.1 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18930 -5.7 -5.5 histidinol-phosphate transaminase compare
BWI76_RS23360 -5.6 -3.6 diaminopimelate decarboxylase compare
BWI76_RS23920 -5.5 -6.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00965 -5.5 -2.0 acetolactate synthase 2 small subunit compare
BWI76_RS04675 -5.4 -7.6 3-isopropylmalate dehydrogenase compare
BWI76_RS11860 -5.3 -11.1 anthranilate synthase component I compare
BWI76_RS07065 -5.3 -9.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04240 -5.2 -2.1 thr operon leader peptide compare
BWI76_RS00855 -5.0 -9.8 argininosuccinate lyase compare
BWI76_RS20965 -4.9 -5.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04670 -4.8 -8.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09760 -4.7 -6.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00400 -4.7 -2.9 glutamine synthetase compare
BWI76_RS09755 -4.6 -7.0 phosphoserine transaminase compare
BWI76_RS00980 -4.6 -12.9 PLP-dependent threonine dehydratase compare
BWI76_RS00805 -4.6 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS22755 -4.5 -10.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04255 -4.5 -7.9 threonine synthase compare
BWI76_RS11840 -4.5 -7.3 tryptophan synthase subunit alpha compare
BWI76_RS04250 -4.4 -9.6 homoserine kinase compare
BWI76_RS01615 -4.4 -9.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00990 -4.4 -12.7 ketol-acid reductoisomerase compare
BWI76_RS25320 -4.4 -9.5 glutamate synthase compare
BWI76_RS00180 -4.3 -2.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS18935 -4.3 -7.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04510 -4.3 -3.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS25115 -4.2 -10.6 argininosuccinate synthase compare
BWI76_RS20435 -4.2 -2.2 chorismate synthase compare
BWI76_RS21265 -4.2 -14.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS02735 -4.2 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS18925 -4.2 -6.5 histidinol dehydrogenase compare
BWI76_RS23220 -4.2 -7.2 amino-acid N-acetyltransferase compare
BWI76_RS18940 -4.1 -5.3 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11845 -4.1 -4.8 tryptophan synthase subunit beta compare
BWI76_RS15115 -4.1 -7.3 MFS transporter compare
BWI76_RS01655 -4.1 -6.0 homoserine O-succinyltransferase compare
BWI76_RS20650 -4.0 -2.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04245 -4.0 -16.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00975 -4.0 -9.4 dihydroxy-acid dehydratase compare
BWI76_RS00785 -4.0 -6.5 cystathionine gamma-synthase compare
BWI76_RS18950 -3.9 -3.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04665 -3.9 -16.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04160 -3.9 -8.6 phosphoserine phosphatase compare
BWI76_RS11850 -3.8 -7.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS22765 -3.8 -10.5 sulfite reductase subunit alpha compare
BWI76_RS23365 -3.8 -9.6 LysR family transcriptional regulator compare
BWI76_RS00845 -3.8 -8.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS26940 -3.8 -6.9 transcriptional regulator compare
BWI76_RS03010 -3.7 -7.5 ornithine carbamoyltransferase compare
BWI76_RS22690 -3.7 -4.2 adenylyl-sulfate kinase compare
BWI76_RS05450 -3.7 -2.4 ribonuclease HI compare
BWI76_RS22760 -3.7 -8.4 sulfite reductase subunit beta compare
BWI76_RS25315 -3.7 -10.4 glutamate synthase large subunit compare
BWI76_RS26570 -3.7 -3.0 anion permease compare
BWI76_RS23230 -3.6 -2.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS20350 -3.6 -6.3 amidophosphoribosyltransferase compare
BWI76_RS26055 -3.6 -9.3 siroheme synthase compare
BWI76_RS01610 -3.5 -8.2 phosphoribosylamine--glycine ligase compare
BWI76_RS21475 -3.5 -8.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04645 -3.5 -3.9 3-dehydroquinase compare
BWI76_RS18955 -3.5 -4.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00385 -3.5 -8.3 nitrogen assimilation regulatory protein compare
BWI76_RS10990 -3.5 -4.2 dihydroorotase compare
BWI76_RS00390 -3.5 -7.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS00850 -3.4 -9.5 acetylglutamate kinase compare
BWI76_RS05015 -3.4 -3.8 transcriptional regulator compare
BWI76_RS13920 -3.4 -4.9 magnesium-translocating P-type ATPase compare
BWI76_RS04685 -3.4 -8.8 putative leucine operon leader peptide compare
BWI76_RS01210 -3.3 -2.6 tyrosine recombinase XerC compare
BWI76_RS11855 -3.2 -7.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23240 -3.1 -4.3 exonuclease V subunit gamma compare
BWI76_RS23265 -3.1 -3.3 hypothetical protein compare
BWI76_RS05840 -3.1 -6.5 glutamate 5-kinase compare
BWI76_RS11965 -3.1 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS08385 -3.1 -3.7 citrate (Si)-synthase compare
BWI76_RS05200 -3.0 -4.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04680 -3.0 -8.3 2-isopropylmalate synthase compare
BWI76_RS23480 -2.9 -11.5 EAL domain-containing protein compare
BWI76_RS05835 -2.9 -3.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS19840 -2.9 -1.8 hypothetical protein compare
BWI76_RS24285 -2.8 -7.3 cystathionine beta-lyase compare
BWI76_RS17720 -2.8 -1.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01200 -2.7 -2.3 diaminopimelate epimerase compare
BWI76_RS06765 -2.6 -3.1 transcriptional regulator compare
BWI76_RS02995 -2.6 -6.6 aspartate carbamoyltransferase compare
BWI76_RS25645 -2.6 -7.4 shikimate dehydrogenase compare
BWI76_RS02530 -2.6 -3.2 tRNA dimethylallyltransferase compare
BWI76_RS09910 -2.6 -13.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05120 -2.5 -6.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS15850 -2.5 -1.8 DUF1317 domain-containing protein compare
BWI76_RS27385 -2.5 -6.8 orotate phosphoribosyltransferase compare
BWI76_RS15225 -2.4 -2.6 DeoR family transcriptional regulator compare
BWI76_RS09635 -2.3 -2.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS26425 -2.3 -7.6 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS00345 -2.3 -4.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS06530 -2.3 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS27165 -2.3 -3.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS09660 -2.3 -2.0 DNA translocase FtsK compare
BWI76_RS27305 -2.2 -6.8 glycosyl transferase compare
BWI76_RS00835 -2.2 -8.2 phosphoenolpyruvate carboxylase compare
BWI76_RS06525 -2.2 -4.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS21465 -2.0 -2.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS08495 -2.0 -4.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00960 -2.0 -6.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS13915 -2.0 -3.9 magnesium transport protein MgtC compare
BWI76_RS23070 -1.9 -5.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS17380 -1.9 -4.3 nitrate transporter component compare
BWI76_RS00985 -1.9 -8.6 transcriptional regulator IlvY compare
BWI76_RS18455 -1.9 -2.0 tRNA-Ser compare
BWI76_RS24850 -1.8 -7.1 DeoR family transcriptional regulator compare
BWI76_RS25425 -1.7 -1.4 arginine repressor compare
BWI76_RS17975 -1.7 -4.0 tail-specific protease compare
BWI76_RS22805 -1.7 -10.1 GTP diphosphokinase compare
BWI76_RS25065 -1.7 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS03665 -1.7 -2.2 ABC transporter ATP-binding protein compare
BWI76_RS01275 -1.6 -4.3 LysR family transcriptional regulator compare
BWI76_RS06770 -1.6 -6.4 Hha toxicity attenuator compare
BWI76_RS15110 -1.6 -8.3 putative excinuclease ABC subunit A compare
BWI76_RS04705 -1.6 -6.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS16535 -1.6 -5.0 MATE family efflux transporter conserved
BWI76_RS23055 -1.6 -4.7 cobalamin biosynthesis protein CbiG compare
BWI76_RS08520 -1.6 -3.3 colicin transporter TolQ compare
BWI76_RS27820 -1.6 -2.3 ilvB operon leader peptide IvbL compare
BWI76_RS17375 -1.6 -3.2 nitrate ABC transporter, permease protein compare
BWI76_RS26000 -1.5 -3.7 aspartate aminotransferase family protein compare
BWI76_RS00600 -1.5 -5.8 LacI family transcriptional regulator compare
BWI76_RS15840 -1.5 -2.3 prophage protein compare
BWI76_RS19845 -1.5 -4.5 phosphatase compare
BWI76_RS02580 -1.4 -2.2 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS20440 -1.4 -1.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS27390 -1.4 -3.0 ribonuclease PH compare
BWI76_RS19670 -1.4 -2.3 S-formylglutathione hydrolase compare
BWI76_RS02180 -1.4 -1.9 hypothetical protein compare
BWI76_RS24025 -1.4 -4.8 agmatinase compare
BWI76_RS27440 -1.4 -2.4 DNA helicase RecG compare
BWI76_RS25700 -1.4 -5.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS22700 -1.4 -5.2 sulfate adenylyltransferase subunit 2 compare
BWI76_RS01185 -1.3 -2.2 adenylate cyclase compare
BWI76_RS25600 -1.3 -1.2 tRNA-Thr compare
BWI76_RS04570 -1.3 -5.9 RNA polymerase-associated protein RapA compare
BWI76_RS17365 -1.3 -6.5 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS25060 -1.3 -3.1 lipoprotein NlpI compare
BWI76_RS22705 -1.3 -5.4 siroheme synthase compare
BWI76_RS17805 -1.3 -1.4 membrane protein compare
BWI76_RS26395 -1.3 -2.6 cell division protein FtsE compare
BWI76_RS01325 -1.3 -1.4 twin-arginine translocase subunit TatB compare
BWI76_RS27915 -1.2 -2.1 YceK/YidQ family lipoprotein compare
BWI76_RS18715 -1.2 -4.9 hypothetical protein compare
BWI76_RS23485 -1.2 -5.7 hypothetical protein compare
BWI76_RS21370 -1.2 -2.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS17370 -1.2 -2.0 nitrate transporter NasD compare
BWI76_RS05010 -1.2 -1.9 tRNA glutamyl-Q synthetase compare
BWI76_RS01870 -1.2 -3.9 diacylglycerol kinase compare
BWI76_RS17385 -1.2 -7.7 nitrate regulatory protein compare
BWI76_RS20360 -1.1 -1.2 cell division protein DedD compare
BWI76_RS01115 -1.1 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS13595 -1.1 -2.3 transcriptional regulator compare
BWI76_RS14075 -1.1 -1.8 TetR family transcriptional regulator compare
BWI76_RS16035 -1.1 -3.3 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS17110 -1.1 -1.8 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS02410 -1.1 -1.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS26775 -1.1 -2.7 endo-1,4-D-glucanase compare
BWI76_RS25280 -1.1 -2.0 RNase adaptor protein RapZ compare
BWI76_RS06910 -1.1 -1.5 transcriptional regulator compare
BWI76_RS01330 -1.1 -2.5 twin-arginine translocase subunit TatC compare
BWI76_RS26390 -1.1 -3.1 cell division protein FtsX compare
BWI76_RS14980 -1.1 -1.9 hypothetical protein compare
BWI76_RS12860 -1.0 -1.5 hypothetical protein compare
BWI76_RS04270 -1.0 -2.3 transaldolase compare
BWI76_RS21000 -1.0 -4.3 exopolyphosphatase compare
BWI76_RS06190 -1.0 -1.0 hypothetical protein compare
BWI76_RS15830 -1.0 -1.7 hypothetical protein compare
BWI76_RS06800 -1.0 -1.2 DUF2496 domain-containing protein compare
BWI76_RS25070 -1.0 -1.5 hypothetical protein compare
BWI76_RS19465 -1.0 -2.0 hypothetical protein compare
BWI76_RS25505 -1.0 -4.9 RNase E specificity factor CsrD compare
BWI76_RS18710 -1.0 -6.5 GGDEF-domain containing protein compare
BWI76_RS09655 -1.0 -2.4 leucine-responsive regulatory protein compare
BWI76_RS01280 -1.0 -5.4 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS11430 -1.0 -1.1 lipoprotein compare
BWI76_RS16645 -1.0 -1.5 DeoR family transcriptional regulator compare
BWI76_RS09640 -1.0 -1.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11580 -1.0 -2.0 L-asparaginase 1 compare
BWI76_RS17980 -0.9 -1.4 RNA chaperone ProQ compare
BWI76_RS12090 -0.9 -3.0 HNH endonuclease compare
BWI76_RS09530 -0.9 -1.1 hypothetical protein compare
BWI76_RS01800 -0.9 -3.7 glucose-6-phosphate isomerase compare
BWI76_RS15760 -0.9 -1.4 hypothetical protein compare
BWI76_RS21165 -0.9 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS17955 -0.9 -2.0 hypothetical protein compare
BWI76_RS20375 -0.9 -1.1 membrane protein compare
BWI76_RS23075 -0.9 -3.3 cobalt-precorrin-5B (C(1))-methyltransferase compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms