Experiment set8IT029 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -10.5 -6.8 histidinol-phosphate transaminase compare
BWI76_RS20355 -9.4 -6.3 colicin V production protein compare
BWI76_RS00805 -9.2 -6.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18920 -7.9 -5.4 ATP phosphoribosyltransferase compare
BWI76_RS04465 -7.8 -5.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -7.7 -7.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS18935 -7.6 -7.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS24285 -7.5 -8.9 cystathionine beta-lyase compare
BWI76_RS01655 -7.3 -7.6 homoserine O-succinyltransferase compare
BWI76_RS10990 -6.9 -3.9 dihydroorotase compare
BWI76_RS23920 -6.9 -6.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18925 -6.8 -7.8 histidinol dehydrogenase compare
BWI76_RS23360 -6.8 -4.7 diaminopimelate decarboxylase compare
BWI76_RS04685 -6.6 -11.0 putative leucine operon leader peptide compare
BWI76_RS00990 -6.5 -9.1 ketol-acid reductoisomerase compare
BWI76_RS21475 -6.5 -6.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00785 -6.3 -7.6 cystathionine gamma-synthase compare
BWI76_RS04255 -6.3 -10.5 threonine synthase compare
BWI76_RS04675 -6.2 -5.7 3-isopropylmalate dehydrogenase compare
BWI76_RS01615 -6.2 -10.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04670 -6.2 -9.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18950 -6.2 -4.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04645 -6.1 -7.3 3-dehydroquinase compare
BWI76_RS18955 -6.1 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00980 -6.1 -12.3 PLP-dependent threonine dehydratase compare
BWI76_RS21265 -6.0 -11.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04245 -6.0 -16.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -5.9 -8.7 amino-acid N-acetyltransferase compare
BWI76_RS09755 -5.8 -7.8 phosphoserine transaminase compare
BWI76_RS04510 -5.8 -3.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS25115 -5.7 -10.2 argininosuccinate synthase compare
BWI76_RS04160 -5.7 -8.3 phosphoserine phosphatase compare
BWI76_RS05835 -5.7 -4.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS03010 -5.6 -7.0 ornithine carbamoyltransferase compare
BWI76_RS11840 -5.6 -4.7 tryptophan synthase subunit alpha compare
BWI76_RS07065 -5.3 -7.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20895 -5.2 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00965 -5.2 -2.0 acetolactate synthase 2 small subunit compare
BWI76_RS00845 -5.2 -8.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11855 -5.2 -7.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS07070 -5.1 -5.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00855 -5.1 -10.0 argininosuccinate lyase compare
BWI76_RS04240 -5.0 -2.2 thr operon leader peptide compare
BWI76_RS02995 -5.0 -6.1 aspartate carbamoyltransferase compare
BWI76_RS22755 -5.0 -9.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS27385 -5.0 -6.7 orotate phosphoribosyltransferase compare
BWI76_RS23365 -4.9 -8.3 LysR family transcriptional regulator compare
BWI76_RS04665 -4.9 -14.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS20965 -4.9 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26570 -4.9 -4.7 anion permease compare
BWI76_RS09645 -4.8 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS20350 -4.8 -6.2 amidophosphoribosyltransferase compare
BWI76_RS00850 -4.7 -8.0 acetylglutamate kinase compare
BWI76_RS11845 -4.7 -3.7 tryptophan synthase subunit beta compare
BWI76_RS00975 -4.6 -8.5 dihydroxy-acid dehydratase compare
BWI76_RS13920 -4.6 -6.8 magnesium-translocating P-type ATPase compare
BWI76_RS11850 -4.6 -9.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04250 -4.6 -7.4 homoserine kinase compare
BWI76_RS11965 -4.5 -3.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS22760 -4.5 -6.1 sulfite reductase subunit beta compare
BWI76_RS00400 -4.4 -2.9 glutamine synthetase compare
BWI76_RS26085 -4.4 -3.2 3-dehydroquinate synthase compare
BWI76_RS02530 -4.4 -4.2 tRNA dimethylallyltransferase compare
BWI76_RS05840 -4.3 -4.4 glutamate 5-kinase compare
BWI76_RS09760 -4.3 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01210 -4.3 -3.2 tyrosine recombinase XerC compare
BWI76_RS25645 -4.3 -7.1 shikimate dehydrogenase compare
BWI76_RS22765 -4.3 -11.1 sulfite reductase subunit alpha compare
BWI76_RS22690 -4.3 -5.9 adenylyl-sulfate kinase compare
BWI76_RS04680 -4.3 -8.4 2-isopropylmalate synthase compare
BWI76_RS18940 -4.2 -4.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS01200 -4.2 -3.5 diaminopimelate epimerase compare
BWI76_RS15115 -4.1 -6.9 MFS transporter compare
BWI76_RS20435 -4.1 -2.3 chorismate synthase compare
BWI76_RS23240 -4.1 -2.8 exonuclease V subunit gamma compare
BWI76_RS02735 -4.1 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS11860 -4.0 -5.5 anthranilate synthase component I compare
BWI76_RS01610 -4.0 -5.4 phosphoribosylamine--glycine ligase compare
BWI76_RS09910 -3.9 -14.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00835 -3.9 -10.2 phosphoenolpyruvate carboxylase compare
BWI76_RS20650 -3.9 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08385 -3.8 -4.8 citrate (Si)-synthase compare
BWI76_RS25320 -3.6 -9.9 glutamate synthase compare
BWI76_RS05200 -3.6 -3.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS21465 -3.5 -2.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05015 -3.3 -2.8 transcriptional regulator compare
BWI76_RS18165 -3.3 -2.4 NUDIX pyrophosphatase compare
BWI76_RS02410 -3.2 -3.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS26000 -3.1 -7.6 aspartate aminotransferase family protein compare
BWI76_RS23480 -3.0 -11.0 EAL domain-containing protein compare
BWI76_RS15225 -3.0 -3.3 DeoR family transcriptional regulator compare
BWI76_RS25315 -3.0 -9.9 glutamate synthase large subunit compare
BWI76_RS06525 -3.0 -4.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS00960 -3.0 -5.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00985 -2.9 -5.3 transcriptional regulator IlvY compare
BWI76_RS23230 -2.8 -3.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS26055 -2.8 -7.0 siroheme synthase compare
BWI76_RS00180 -2.7 -1.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09660 -2.6 -2.5 DNA translocase FtsK compare
BWI76_RS01800 -2.6 -4.9 glucose-6-phosphate isomerase compare
BWI76_RS19870 -2.6 -3.0 malate:quinone oxidoreductase compare
BWI76_RS23265 -2.5 -4.1 hypothetical protein compare
BWI76_RS27390 -2.3 -3.2 ribonuclease PH compare
BWI76_RS27165 -2.2 -5.0 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS08380 -2.2 -2.0 endonuclease VIII compare
BWI76_RS00385 -2.2 -9.2 nitrogen assimilation regulatory protein compare
BWI76_RS20640 -2.1 -4.5 cysteine synthase A compare
BWI76_RS09655 -2.0 -6.1 leucine-responsive regulatory protein compare
BWI76_RS06530 -2.0 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS21075 -2.0 -2.0 membrane protein compare
BWI76_RS13915 -2.0 -3.9 magnesium transport protein MgtC compare
BWI76_RS03665 -2.0 -2.5 ABC transporter ATP-binding protein compare
BWI76_RS04100 -2.0 -4.1 peptide chain release factor 3 compare
BWI76_RS06765 -1.9 -3.3 transcriptional regulator compare
BWI76_RS24025 -1.9 -6.2 agmatinase compare
BWI76_RS00345 -1.9 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS00390 -1.9 -3.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS16965 -1.8 -2.2 murein lipoprotein compare
BWI76_RS06800 -1.8 -1.7 DUF2496 domain-containing protein compare
BWI76_RS15110 -1.8 -9.7 putative excinuclease ABC subunit A compare
BWI76_RS20380 -1.8 -1.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS16535 -1.8 -6.4 MATE family efflux transporter conserved
BWI76_RS25065 -1.7 -2.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS06770 -1.6 -8.3 Hha toxicity attenuator compare
BWI76_RS01275 -1.6 -5.2 LysR family transcriptional regulator compare
BWI76_RS05450 -1.6 -2.0 ribonuclease HI compare
BWI76_RS21310 -1.6 -1.2 DNA repair protein RecO compare
BWI76_RS26460 -1.5 -5.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00440 -1.5 -1.6 CopG family transcriptional regulator compare
BWI76_RS19770 -1.5 -2.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS15850 -1.5 -1.2 DUF1317 domain-containing protein compare
BWI76_RS15840 -1.5 -2.7 prophage protein compare
BWI76_RS26455 -1.4 -2.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21370 -1.4 -2.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS25505 -1.4 -7.3 RNase E specificity factor CsrD compare
BWI76_RS09650 -1.4 -4.1 hypothetical protein compare
BWI76_RS15060 -1.4 -3.3 MarR family transcriptional regulator compare
BWI76_RS04305 -1.4 -1.2 molecular chaperone DnaJ compare
BWI76_RS17975 -1.4 -3.7 tail-specific protease compare
BWI76_RS13595 -1.4 -2.7 transcriptional regulator compare
BWI76_RS18710 -1.3 -8.6 GGDEF-domain containing protein compare
BWI76_RS17720 -1.3 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS26200 -1.3 -5.0 starch synthase compare
BWI76_RS20695 -1.3 -1.5 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS22700 -1.2 -2.3 sulfate adenylyltransferase subunit 2 compare
BWI76_RS27440 -1.2 -2.2 DNA helicase RecG compare
BWI76_RS20440 -1.2 -1.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS24850 -1.2 -4.8 DeoR family transcriptional regulator compare
BWI76_RS10745 -1.2 -1.2 hypothetical protein compare
BWI76_RS18715 -1.2 -4.6 hypothetical protein compare
BWI76_RS00380 -1.1 -4.1 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS26390 -1.1 -1.9 cell division protein FtsX compare
BWI76_RS24900 -1.1 -1.5 DeoR family transcriptional regulator compare
BWI76_RS12885 -1.1 -2.2 hypothetical protein compare
BWI76_RS25280 -1.1 -1.9 RNase adaptor protein RapZ compare
BWI76_RS08525 -1.1 -3.1 colicin transporter compare
BWI76_RS16955 -1.1 -1.3 hypothetical protein compare
BWI76_RS04570 -1.1 -3.9 RNA polymerase-associated protein RapA compare
BWI76_RS20050 -1.1 -1.4 hypothetical protein compare
BWI76_RS19010 -1.1 -1.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS10035 -1.1 -1.5 hypothetical protein compare
BWI76_RS26940 -1.0 -5.5 transcriptional regulator compare
BWI76_RS26665 -1.0 -2.2 DNA-binding response regulator compare
BWI76_RS26620 -1.0 -1.0 Fe-S biogenesis protein NfuA compare
BWI76_RS04955 -1.0 -1.8 hypoxanthine phosphoribosyltransferase compare
BWI76_RS25480 -1.0 -2.0 ribonuclease E/G compare
BWI76_RS00600 -1.0 -2.9 LacI family transcriptional regulator compare
BWI76_RS21000 -1.0 -3.1 exopolyphosphatase compare
BWI76_RS17980 -1.0 -2.4 RNA chaperone ProQ compare
BWI76_RS21480 -1.0 -2.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS04715 -1.0 -1.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS25060 -1.0 -2.5 lipoprotein NlpI compare
BWI76_RS00710 -1.0 -1.8 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS26075 -0.9 -2.6 DNA adenine methylase compare
BWI76_RS09870 -0.9 -3.3 aromatic amino acid aminotransferase compare
BWI76_RS01000 -0.9 -1.5 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS22090 -0.9 -1.9 transcriptional regulator compare
BWI76_RS23055 -0.9 -2.9 cobalamin biosynthesis protein CbiG compare
BWI76_RS23485 -0.9 -3.9 hypothetical protein compare
BWI76_RS19465 -0.9 -2.7 hypothetical protein compare
BWI76_RS11430 -0.9 -1.0 lipoprotein compare
BWI76_RS05070 -0.9 -1.5 type II secretion system protein GspH compare
BWI76_RS08530 -0.9 -2.3 protein TolA compare
BWI76_RS17565 -0.9 -1.7 hypothetical protein compare
BWI76_RS17110 -0.9 -1.5 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS09515 -0.9 -1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS26065 -0.9 -1.8 phosphoglycolate phosphatase compare
BWI76_RS15830 -0.9 -1.6 hypothetical protein compare
BWI76_RS06185 -0.9 -3.6 shikimate kinase II compare
BWI76_RS05235 -0.9 -1.1 hypothetical protein compare
BWI76_RS19685 -0.9 -3.2 lysine transporter compare
BWI76_RS19845 -0.9 -4.2 phosphatase compare
BWI76_RS13800 -0.9 -3.2 zinc-dependent alcohol dehydrogenase compare
BWI76_RS12420 -0.9 -1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS23915 -0.9 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS25910 -0.9 -3.9 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS07740 -0.9 -0.9 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS00640 -0.9 -1.7 L-rhamnose mutarotase compare
BWI76_RS25870 -0.9 -1.3 elongation factor Tu compare
BWI76_RS21580 -0.9 -1.3 SsrA-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms