Experiment set8IT028 for Burkholderia phytofirmans PsJN

Compare to:

2-Deoxyadenosine 5-monophosphate 5 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS02940 +6.9 34.5 adenine phosphoribosyltransferase conserved
BPHYT_RS16245 +6.7 29.0 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS33580 +6.2 16.9 geranyltranstransferase compare
BPHYT_RS16255 +5.8 12.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS03280 +4.6 9.6 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS11325 +4.1 17.4 voltage-gated chloride channel protein ClcB compare
BPHYT_RS03555 +4.0 8.9 glutamine-synthetase adenylyltransferase conserved
BPHYT_RS05960 +3.4 11.4 endoribonuclease L-PSP compare
BPHYT_RS09155 +3.2 13.0 3-ketoacyl-ACP reductase compare
BPHYT_RS21745 +3.1 13.6 choline dehydrogenase compare
BPHYT_RS16090 +3.1 1.9 hypothetical protein compare
BPHYT_RS12815 +3.1 11.8 IclR family transcriptional regulator compare
BPHYT_RS36385 +2.9 2.2 TetR family transcriptional regulator compare
BPHYT_RS21740 +2.8 14.6 IclR family transcriptional regulator compare
BPHYT_RS21750 +2.7 9.4 major facilitator transporter compare
BPHYT_RS08580 +2.7 9.8 ADP-ribose pyrophosphatase compare
BPHYT_RS17085 +2.6 11.7 hypoxanthine phosphoribosyltransferase compare
BPHYT_RS07615 +2.5 8.6 glycogen synthase compare
BPHYT_RS36300 +2.4 10.8 hypothetical protein compare
BPHYT_RS03880 +2.4 16.0 LysR family transcriptional regulator compare
BPHYT_RS29720 +2.3 2.3 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS18935 +2.3 13.0 flagellar biosynthesis regulator FlhF compare
BPHYT_RS36220 +2.3 0.9 hypothetical protein compare
BPHYT_RS16445 +2.3 5.4 RNA helicase compare
BPHYT_RS26965 +2.3 1.7 L-lactate dehydrogenase, LldG subunit (from data) compare
BPHYT_RS18925 +2.2 12.6 RNA polymerase sigma70 compare
BPHYT_RS36420 +2.2 4.0 hypothetical protein compare
BPHYT_RS13655 +2.2 15.3 GTP pyrophosphokinase compare
BPHYT_RS16665 +2.2 4.7 peroxiredoxin compare
BPHYT_RS08615 +2.2 2.5 hypothetical protein compare
BPHYT_RS19435 +2.2 6.0 16S rRNA methyltransferase compare
BPHYT_RS05905 +2.2 1.9 hypothetical protein compare
BPHYT_RS16880 +2.1 2.3 malic enzyme compare
BPHYT_RS23230 +2.1 2.4 histidine kinase compare
BPHYT_RS12845 +2.1 14.7 ATPase compare
BPHYT_RS15080 +2.1 5.5 FAD-binding molybdopterin dehydrogenase conserved
BPHYT_RS08835 +2.0 10.6 glyoxylate carboligase conserved
BPHYT_RS33920 +2.0 8.4 type II citrate synthase compare
BPHYT_RS23875 +2.0 1.3 sugar ABC transporter ATP-binding protein compare
BPHYT_RS25770 +2.0 2.0 hypothetical protein compare
BPHYT_RS11235 +2.0 2.3 hypothetical protein compare
BPHYT_RS16710 +2.0 1.7 LysR family transcriptional regulator compare
BPHYT_RS08840 +1.9 8.3 LysR family transcriptional regulator compare
BPHYT_RS15455 +1.9 6.4 hypothetical protein compare
BPHYT_RS33845 +1.9 5.8 bacteriocin production protein compare
BPHYT_RS14505 +1.9 3.0 membrane protein compare
BPHYT_RS36365 +1.9 2.6 hypothetical protein compare
BPHYT_RS28930 +1.9 1.9 chromosome partitioning protein ParA compare
BPHYT_RS32395 +1.8 1.3 hypothetical protein compare
BPHYT_RS15085 +1.8 10.5 aldehyde oxidase conserved
BPHYT_RS35835 +1.8 1.7 hypothetical protein compare
BPHYT_RS16250 +1.8 2.5 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS04055 +1.8 5.7 PST family polysaccharide export protein compare
BPHYT_RS23910 +1.8 4.2 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS03875 +1.8 3.0 dehydrogenase compare
BPHYT_RS25500 +1.8 1.8 hypothetical protein compare
BPHYT_RS14655 +1.8 6.9 Fis family transcriptional regulator compare
BPHYT_RS21705 +1.8 5.8 sulfoacetaldehyde acetyltransferase compare
BPHYT_RS02560 +1.8 10.2 glutathione synthetase compare
BPHYT_RS25335 +1.7 1.6 hypothetical protein compare
BPHYT_RS30295 +1.7 3.3 acyl-CoA dehydrogenase compare
BPHYT_RS09850 +1.7 1.9 molybdopterin oxidoreductase compare
BPHYT_RS31910 +1.7 1.9 hypothetical protein compare
BPHYT_RS18825 +1.6 5.1 flagellar biosynthesis protein FliP compare
BPHYT_RS16180 +1.6 1.0 TetR family transcriptional regulator compare
BPHYT_RS11545 +1.6 10.1 allantoicase compare
BPHYT_RS18945 +1.6 7.1 flagellar biosynthesis protein FlhB compare
BPHYT_RS07520 +1.6 6.8 permease compare
BPHYT_RS19680 +1.6 10.4 glutamate--cysteine ligase compare
BPHYT_RS13200 +1.6 2.1 molybdopterin binding oxidoreductase compare
BPHYT_RS20280 +1.6 2.8 hypothetical protein compare
BPHYT_RS18890 +1.6 3.6 flagellar basal body rod protein FlgC compare
BPHYT_RS03980 +1.6 7.1 mannose-1-phosphate guanyltransferase compare
BPHYT_RS08030 +1.6 3.6 transposase compare
BPHYT_RS14185 +1.5 3.0 transcription elongation factor GreA compare
BPHYT_RS09115 +1.5 2.3 RNA polymerase sigma factor RpoS compare
BPHYT_RS09405 +1.5 5.8 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS14880 +1.5 2.4 integration host factor subunit beta compare
BPHYT_RS20905 +1.5 1.3 hypothetical protein compare
BPHYT_RS05290 +1.5 1.4 hypothetical protein compare
BPHYT_RS33685 +1.5 7.5 molybdate ABC transporter substrate-binding protein compare
BPHYT_RS10350 +1.5 1.9 hypothetical protein compare
BPHYT_RS23350 +1.5 2.1 NAD-dependent epimerase/dehydratase compare
BPHYT_RS23175 +1.5 1.7 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase compare
BPHYT_RS18880 +1.5 9.0 flagellar hook protein FlgE compare
BPHYT_RS18865 +1.5 3.0 flagellar L-ring protein FlgH compare
BPHYT_RS04140 +1.5 3.5 polysaccharide biosynthesis protein compare
BPHYT_RS05235 +1.5 1.6 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase compare
BPHYT_RS04035 +1.5 4.1 transferase compare
BPHYT_RS18795 +1.5 6.6 flagellar export protein FliJ compare
BPHYT_RS18620 +1.5 5.2 transcriptional regulator compare
BPHYT_RS08490 +1.5 3.3 Crp/Fnr family transcriptional regulator compare
BPHYT_RS06400 +1.5 5.9 oxygen-dependent coproporphyrinogen-III oxidase compare
BPHYT_RS15450 +1.5 6.2 chromosome partitioning protein compare
BPHYT_RS02880 +1.5 1.7 ATP-dependent protease compare
BPHYT_RS02435 +1.4 1.4 hypothetical protein compare
BPHYT_RS28075 +1.4 1.1 cytochrome B561 compare
BPHYT_RS11870 +1.4 1.2 AraC family transcriptional regulator compare
BPHYT_RS31690 +1.4 2.3 hypothetical protein compare
BPHYT_RS03645 +1.4 2.4 tRNA dimethylallyltransferase compare
BPHYT_RS17205 +1.4 1.7 peroxiredoxin compare
BPHYT_RS28025 +1.4 1.2 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS33460 +1.4 1.3 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS23930 +1.4 3.0 triphosphoribosyl-dephospho-CoA synthase compare
BPHYT_RS18830 +1.4 5.7 flagellar biosynthesis protein FliQ compare
BPHYT_RS23990 +1.4 1.0 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS14250 +1.4 6.6 glycosyl transferase compare
BPHYT_RS18790 +1.4 6.2 ATP synthase compare
BPHYT_RS19325 +1.4 2.3 glycine cleavage system H protein compare
BPHYT_RS36565 +1.4 5.3 hypothetical protein compare
BPHYT_RS12520 +1.3 2.2 nicotinate phosphoribosyltransferase compare
BPHYT_RS18940 +1.3 7.2 flagellar biosynthesis protein FlhA compare
BPHYT_RS23760 +1.3 3.0 phosphonate ABC transporter permease compare
BPHYT_RS33980 +1.3 8.4 aconitate hydratase conserved
BPHYT_RS09410 +1.3 4.1 LysR family transcriptional regulator compare
BPHYT_RS14245 +1.3 1.5 membrane protein compare
BPHYT_RS18785 +1.3 2.5 flagellar assembly protein FliH compare
BPHYT_RS33695 +1.3 5.1 molybdenum ABC transporter ATPase compare
BPHYT_RS33615 +1.3 2.6 decarboxylase compare
BPHYT_RS34780 +1.3 3.1 phytoene synthase compare
BPHYT_RS11515 +1.3 5.4 LysR family transcriptional regulator conserved
BPHYT_RS04050 +1.3 5.4 group 1 glycosyl transferase compare
BPHYT_RS18900 +1.3 8.1 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS31755 +1.3 2.7 amino acid ABC transporter ATPase compare
BPHYT_RS29675 +1.3 2.4 flagellar motor protein MotB compare
BPHYT_RS28980 +1.3 2.6 membrane protein compare
BPHYT_RS18775 +1.3 7.2 flagellar M-ring protein FliF compare
BPHYT_RS23260 +1.3 4.5 isovaleryl-CoA dehydrogenase compare
BPHYT_RS09600 +1.3 2.8 hypothetical protein compare
BPHYT_RS35735 +1.3 1.2 nitroreductase compare
BPHYT_RS29945 +1.3 1.5 histidine kinase compare
BPHYT_RS28320 +1.3 2.1 molecular chaperone DnaJ compare
BPHYT_RS16085 +1.3 2.1 DeoR faimly transcriptional regulator compare
BPHYT_RS04885 +1.3 1.6 threonine-phosphate decarboxylase compare
BPHYT_RS14715 +1.2 4.3 molybdenum cofactor biosynthesis protein MogA compare
BPHYT_RS21240 +1.2 6.0 LuxR family transcriptional regulator compare
BPHYT_RS14255 +1.2 10.3 ABC transporter compare
BPHYT_RS12290 +1.2 3.1 universal stress protein UspA compare
BPHYT_RS34185 +1.2 4.2 cold-shock protein compare
BPHYT_RS18875 +1.2 5.4 flagellar basal body rod protein FlgF compare
BPHYT_RS23265 +1.2 3.2 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS36555 +1.2 5.3 hypothetical protein compare
BPHYT_RS04040 +1.2 4.7 hypothetical protein compare
BPHYT_RS11155 +1.2 1.1 hypothetical protein compare
BPHYT_RS04005 +1.2 2.1 GDP-L-fucose synthase compare
BPHYT_RS02415 +1.2 4.0 cytochrome C550 compare
BPHYT_RS22420 +1.2 1.5 membrane protein compare
BPHYT_RS09400 +1.2 5.5 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS02975 +1.2 1.9 membrane protein compare
BPHYT_RS07325 +1.2 1.0 GntR family transcriptional regulator compare
BPHYT_RS17430 +1.2 3.1 thiol:disulfide interchange protein compare
BPHYT_RS05895 +1.2 1.1 hypothetical protein compare
BPHYT_RS31205 +1.2 1.7 peptide ABC transporter ATP-binding protein compare
BPHYT_RS18870 +1.2 3.6 flagellar basal body rod protein FlgG compare
BPHYT_RS11320 +1.2 2.8 glutathione S-transferase compare
BPHYT_RS03900 +1.2 1.0 phospholipid-binding protein compare
BPHYT_RS16455 +1.2 7.1 ferritin compare
BPHYT_RS07050 +1.2 1.0 membrane protein compare
BPHYT_RS03090 +1.1 1.2 hypothetical protein compare
BPHYT_RS21130 +1.1 1.6 F420-dependent oxidoreductase compare
BPHYT_RS25935 +1.1 2.1 type III secretion protein compare
BPHYT_RS02150 +1.1 1.8 biotin synthase compare
BPHYT_RS13185 +1.1 2.1 2,4-dienoyl-CoA reductase compare
BPHYT_RS10030 +1.1 3.1 hemolysin D compare
BPHYT_RS22325 +1.1 2.3 histidine kinase compare
BPHYT_RS04125 +1.1 3.2 hypothetical protein compare
BPHYT_RS04150 +1.1 5.0 UDP-galactopyranose mutase compare
BPHYT_RS20725 +1.1 1.0 histidine kinase compare
BPHYT_RS16815 +1.1 1.4 ureidoglycolate hydrolase compare
BPHYT_RS05155 +1.1 3.3 acetyltransferase GCN5 compare
BPHYT_RS16535 +1.1 4.5 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
BPHYT_RS18885 +1.1 3.9 flagellar basal body rod modification protein FlgD compare
BPHYT_RS31960 +1.1 2.9 hypothetical protein compare
BPHYT_RS03990 +1.1 4.9 sugar ABC transporter substrate-binding protein compare
BPHYT_RS28055 +1.1 2.2 membrane protein compare
BPHYT_RS05610 +1.1 4.7 DNA-cytosine methyltransferase compare
BPHYT_RS10125 +1.1 1.5 hypothetical protein compare
BPHYT_RS07435 +1.1 1.6 amino acid transporter compare
BPHYT_RS28360 +1.1 0.5 carboxymuconolactone decarboxylase compare
BPHYT_RS15575 +1.1 4.2 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
BPHYT_RS07425 +1.1 2.6 hypothetical protein compare
BPHYT_RS11040 +1.1 0.9 GntR family transcriptional regulator compare
BPHYT_RS18810 +1.1 4.2 flagellar motor switch protein FliM compare
BPHYT_RS13815 +1.1 2.9 hypothetical protein compare
BPHYT_RS09545 +1.1 0.8 peptide methionine sulfoxide reductase compare
BPHYT_RS26570 +1.1 0.8 5'-nucleotidase compare
BPHYT_RS28245 +1.1 1.5 MFS transporter compare
BPHYT_RS09385 +1.1 0.8 FAD-dependent oxidoreductase compare
BPHYT_RS18580 +1.1 6.3 short-chain dehydrogenase compare
BPHYT_RS08060 +1.1 3.0 ribosome maturation factor RimP compare
BPHYT_RS18860 +1.1 3.2 flagellar P-ring protein FlgI compare
BPHYT_RS18895 +1.1 4.1 flagellar basal body rod protein FlgB compare
BPHYT_RS10230 +1.1 1.5 hypothetical protein compare
BPHYT_RS15095 +1.1 5.7 adenine deaminase conserved
BPHYT_RS27505 +1.1 3.6 hypothetical protein compare
BPHYT_RS35405 +1.1 2.2 hypothetical protein compare
BPHYT_RS30140 +1.1 1.4 3-methylitaconate isomerase compare
BPHYT_RS20600 +1.0 2.5 peroxiredoxin compare
BPHYT_RS30195 +1.0 1.6 ABC transporter substrate-binding protein compare
BPHYT_RS09245 +1.0 1.7 ABC transporter ATP-binding protein compare


Specific Phenotypes

For 39 genes in this experiment

For carbon source 2-Deoxyadenosine 5-monophosphate in Burkholderia phytofirmans PsJN

For carbon source 2-Deoxyadenosine 5-monophosphate across organisms