Experiment set8IT027 for Bacteroides thetaiotaomicron VPI-5482
BHIS with Chlorpromazine hydrochloride 0.2 mM
Group: stressMedia: BHIS + Chlorpromazine hydrochloride (0.2 mM) + Dimethyl Sulfoxide (2 vol%)
Culturing: Btheta_ML6a, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans on 6/18/18
Media components: 7.7 g/L Calf brains, 9.8 g/L Beef heart, 10 g/L Proteose Peptone, 5 g/L Sodium Chloride, 2.5 g/L Disodium phosphate, 1 g/L L-Cysteine, 2 g/L Sodium bicarbonate, 0.005 g/L Hemin
Specific Phenotypes
For 14 genes in this experiment
For stress Chlorpromazine hydrochloride in Bacteroides thetaiotaomicron VPI-5482
For stress Chlorpromazine hydrochloride across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| D-Galacturonate and D-Glucuronate Utilization | 1 |
| Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria | 1 |
| Signal peptidase | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Ubiquinone and menaquinone biosynthesis
- Pentose and glucuronate interconversions
- Ascorbate and aldarate metabolism
- Pyrimidine metabolism
- Histidine metabolism
- Tyrosine metabolism
- Tryptophan metabolism
- Benzoxazinone biosynthesis
- Nucleotide sugars metabolism
- Glycosaminoglycan degradation
- Naphthalene and anthracene degradation
- Porphyrin and chlorophyll metabolism
- Carotenoid biosynthesis - General
- Phenylpropanoid biosynthesis
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
- Drug metabolism - other enzymes
- Biosynthesis of alkaloids derived from shikimate pathway
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| pyrimidine ribonucleosides salvage I | 3 | 3 | 2 |
| 4-deoxy-L-threo-hex-4-enopyranuronate degradation | 5 | 5 | 1 |
| superpathway of pyrimidine ribonucleosides salvage | 10 | 9 | 2 |
| nucleoside and nucleotide degradation (archaea) | 10 | 4 | 1 |
| superpathway of microbial D-galacturonate and D-glucuronate degradation | 31 | 15 | 1 |