Experiment set8IT026 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS20350 -9.7 -6.7 amidophosphoribosyltransferase compare
BWI76_RS20355 -9.1 -4.5 colicin V production protein compare
BWI76_RS18950 -8.7 -4.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS01655 -8.7 -7.9 homoserine O-succinyltransferase compare
BWI76_RS04250 -8.0 -7.0 homoserine kinase compare
BWI76_RS01615 -8.0 -5.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS24285 -7.8 -7.6 cystathionine beta-lyase compare
BWI76_RS19845 -7.7 -5.9 phosphatase compare
BWI76_RS04675 -7.7 -7.0 3-isopropylmalate dehydrogenase compare
BWI76_RS04255 -7.3 -8.7 threonine synthase compare
BWI76_RS05835 -7.3 -4.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS04670 -7.2 -10.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21265 -7.1 -14.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11965 -7.1 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04685 -6.9 -9.5 putative leucine operon leader peptide compare
BWI76_RS20895 -6.9 -5.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08385 -6.9 -3.1 citrate (Si)-synthase compare
BWI76_RS04160 -6.8 -6.7 phosphoserine phosphatase compare
BWI76_RS13920 -6.8 -8.1 magnesium-translocating P-type ATPase compare
BWI76_RS24400 -6.7 -4.7 outer membrane channel protein TolC compare
BWI76_RS23365 -6.7 -4.5 LysR family transcriptional regulator compare
BWI76_RS07065 -6.7 -7.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00990 -6.6 -9.1 ketol-acid reductoisomerase compare
BWI76_RS23360 -6.6 -3.6 diaminopimelate decarboxylase compare
BWI76_RS20965 -6.6 -3.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS01325 -6.6 -3.2 twin-arginine translocase subunit TatB compare
BWI76_RS18065 -6.6 -1.9 DNA polymerase III subunit theta compare
BWI76_RS01800 -6.6 -4.5 glucose-6-phosphate isomerase compare
BWI76_RS04665 -6.5 -19.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS11850 -6.5 -8.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS07070 -6.4 -5.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21475 -6.4 -4.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS27385 -6.4 -7.6 orotate phosphoribosyltransferase compare
BWI76_RS10990 -6.4 -2.9 dihydroorotase compare
BWI76_RS18940 -6.3 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS25115 -6.2 -7.8 argininosuccinate synthase compare
BWI76_RS00980 -6.2 -11.4 PLP-dependent threonine dehydratase compare
BWI76_RS05840 -6.2 -6.0 glutamate 5-kinase compare
BWI76_RS25220 -6.2 -4.3 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS26085 -6.2 -3.1 3-dehydroquinate synthase compare
BWI76_RS00855 -6.2 -8.0 argininosuccinate lyase compare
BWI76_RS18930 -6.1 -3.7 histidinol-phosphate transaminase compare
BWI76_RS00785 -6.1 -7.3 cystathionine gamma-synthase compare
BWI76_RS21070 -6.0 -3.0 outer membrane protein assembly factor BamB compare
BWI76_RS06525 -6.0 -4.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS09755 -6.0 -6.0 phosphoserine transaminase compare
BWI76_RS18935 -5.9 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS25230 -5.9 -9.4 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS26570 -5.8 -4.0 anion permease compare
BWI76_RS04470 -5.8 -9.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS00805 -5.8 -3.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18920 -5.7 -4.1 ATP phosphoribosyltransferase compare
BWI76_RS18925 -5.7 -6.6 histidinol dehydrogenase compare
BWI76_RS25645 -5.6 -8.4 shikimate dehydrogenase compare
BWI76_RS23920 -5.6 -4.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04510 -5.6 -2.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS04245 -5.6 -15.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS03010 -5.6 -7.1 ornithine carbamoyltransferase compare
BWI76_RS11855 -5.5 -6.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS18955 -5.5 -5.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18755 -5.4 -1.6 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS00850 -5.3 -5.3 acetylglutamate kinase compare
BWI76_RS00845 -5.3 -8.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00965 -5.3 -1.5 acetolactate synthase 2 small subunit compare
BWI76_RS02815 -5.1 -2.7 fructose-bisphosphatase class I compare
BWI76_RS04240 -4.9 -1.7 thr operon leader peptide compare
BWI76_RS02995 -4.9 -6.6 aspartate carbamoyltransferase compare
BWI76_RS23220 -4.8 -5.9 amino-acid N-acetyltransferase compare
BWI76_RS00985 -4.8 -6.1 transcriptional regulator IlvY compare
BWI76_RS01610 -4.8 -5.4 phosphoribosylamine--glycine ligase compare
BWI76_RS04465 -4.7 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04680 -4.6 -9.4 2-isopropylmalate synthase compare
BWI76_RS09910 -4.6 -14.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS27310 -4.5 -7.7 glycosyltransferase compare
BWI76_RS00975 -4.5 -6.3 dihydroxy-acid dehydratase compare
BWI76_RS00835 -4.5 -10.4 phosphoenolpyruvate carboxylase compare
BWI76_RS11860 -4.5 -5.7 anthranilate synthase component I compare
BWI76_RS04645 -4.4 -4.6 3-dehydroquinase compare
BWI76_RS09645 -4.4 -1.8 thioredoxin-disulfide reductase compare
BWI76_RS00400 -4.3 -2.1 glutamine synthetase compare
BWI76_RS17720 -4.3 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS27390 -4.3 -4.2 ribonuclease PH compare
BWI76_RS25215 -4.2 -4.6 phospholipid-binding protein MlaC compare
BWI76_RS20155 -4.1 -2.7 NADH-quinone oxidoreductase subunit I compare
BWI76_RS00180 -4.1 -1.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS25225 -4.1 -5.6 ABC transporter permease compare
BWI76_RS01200 -4.0 -3.2 diaminopimelate epimerase compare
BWI76_RS21370 -4.0 -2.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS23240 -3.9 -2.7 exonuclease V subunit gamma compare
BWI76_RS20475 -3.7 -4.1 phospholipid-binding lipoprotein MlaA compare
BWI76_RS00345 -3.7 -5.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS11840 -3.7 -4.8 tryptophan synthase subunit alpha compare
BWI76_RS26665 -3.6 -2.5 DNA-binding response regulator compare
BWI76_RS11845 -3.6 -3.1 tryptophan synthase subunit beta compare
BWI76_RS20650 -3.5 -2.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS21350 -3.5 -4.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS20150 -3.5 -2.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS00960 -3.5 -5.3 acetolactate synthase 2 catalytic subunit compare
BWI76_RS23265 -3.5 -2.8 hypothetical protein compare
BWI76_RS09760 -3.4 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS06765 -3.4 -3.1 transcriptional regulator compare
BWI76_RS06530 -3.4 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS15115 -3.3 -5.6 MFS transporter compare
BWI76_RS02530 -3.3 -2.7 tRNA dimethylallyltransferase compare
BWI76_RS26000 -3.3 -5.7 aspartate aminotransferase family protein compare
BWI76_RS21465 -3.3 -2.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS25280 -3.2 -2.1 RNase adaptor protein RapZ compare
BWI76_RS20360 -3.2 -1.3 cell division protein DedD compare
BWI76_RS09660 -3.1 -2.0 DNA translocase FtsK compare
BWI76_RS18140 -3.1 -5.1 zinc ABC transporter permease compare
BWI76_RS23885 -3.0 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS04305 -3.0 -1.2 molecular chaperone DnaJ compare
BWI76_RS25060 -2.9 -2.9 lipoprotein NlpI compare
BWI76_RS01330 -2.9 -2.8 twin-arginine translocase subunit TatC compare
BWI76_RS21075 -2.9 -2.3 membrane protein compare
BWI76_RS26670 -2.8 -7.3 two-component sensor histidine kinase compare
BWI76_RS18135 -2.8 -4.5 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS11170 -2.8 -1.4 hypothetical protein compare
BWI76_RS19935 -2.8 -1.6 hypothetical protein compare
BWI76_RS23230 -2.8 -2.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS25425 -2.8 -2.0 arginine repressor compare
BWI76_RS02410 -2.8 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS06800 -2.8 -1.4 DUF2496 domain-containing protein compare
BWI76_RS05260 -2.7 -1.6 chaperone compare
BWI76_RS05015 -2.7 -2.3 transcriptional regulator compare
BWI76_RS08525 -2.7 -3.2 colicin transporter compare
BWI76_RS20435 -2.6 -1.4 chorismate synthase compare
BWI76_RS00355 -2.6 -3.1 DNA polymerase I compare
BWI76_RS13915 -2.6 -4.8 magnesium transport protein MgtC compare
BWI76_RS06680 -2.6 -1.0 hypothetical protein compare
BWI76_RS25065 -2.6 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS15225 -2.5 -1.5 DeoR family transcriptional regulator compare
BWI76_RS12235 -2.5 -2.0 hypothetical protein compare
BWI76_RS18130 -2.5 -3.9 zinc ABC transporter substrate-binding protein compare
BWI76_RS27165 -2.5 -4.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS23480 -2.5 -7.4 EAL domain-containing protein compare
BWI76_RS22690 -2.5 -3.3 adenylyl-sulfate kinase compare
BWI76_RS26455 -2.4 -2.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS16675 -2.4 -1.2 ABC transporter compare
BWI76_RS15110 -2.4 -9.5 putative excinuclease ABC subunit A compare
BWI76_RS01210 -2.3 -1.6 tyrosine recombinase XerC compare
BWI76_RS22755 -2.3 -5.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS17155 -2.3 -1.8 hypothetical protein compare
BWI76_RS02735 -2.3 -2.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26395 -2.3 -3.1 cell division protein FtsE compare
BWI76_RS01275 -2.3 -7.8 LysR family transcriptional regulator compare
BWI76_RS22765 -2.3 -8.4 sulfite reductase subunit alpha compare
BWI76_RS19805 -2.3 -2.7 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS05200 -2.2 -2.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS14615 -2.2 -1.3 hypothetical protein compare
BWI76_RS00875 -2.2 -3.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS22760 -2.2 -5.0 sulfite reductase subunit beta compare
BWI76_RS08500 -2.2 -2.3 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS25320 -2.1 -4.9 glutamate synthase compare
BWI76_RS19010 -2.1 -2.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS04100 -2.1 -2.4 peptide chain release factor 3 compare
BWI76_RS08985 -2.0 -1.9 threonine/homoserine exporter RhtA compare
BWI76_RS20145 -2.0 -1.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS04530 -2.0 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS06770 -2.0 -7.3 Hha toxicity attenuator compare
BWI76_RS07730 -2.0 -1.3 iron-enterobactin transporter membrane protein compare
BWI76_RS01630 -2.0 -1.3 16S ribosomal RNA compare
BWI76_RS04425 -2.0 -2.3 oxaloacetate decarboxylase subunit gamma compare
BWI76_RS01090 -1.9 -4.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS26460 -1.9 -3.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS27440 -1.9 -3.0 DNA helicase RecG compare
BWI76_RS15955 -1.9 -2.9 transcriptional regulator compare
BWI76_RS12950 -1.9 -3.9 acriflavin resistance protein AcrA compare
BWI76_RS20170 -1.9 -3.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS25920 -1.8 -1.7 peptidylprolyl isomerase compare
BWI76_RS11820 -1.8 -1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS05895 -1.8 -3.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS12860 -1.8 -2.0 hypothetical protein compare
BWI76_RS08425 -1.8 -3.6 succinyl-CoA ligase subunit beta compare
BWI76_RS25485 -1.7 -1.3 septum formation protein Maf compare
BWI76_RS00440 -1.7 -1.3 CopG family transcriptional regulator compare
BWI76_RS06475 -1.7 -1.2 protoheme IX farnesyltransferase compare
BWI76_RS04705 -1.7 -2.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS03045 -1.7 -1.1 hypothetical protein compare
BWI76_RS24850 -1.7 -5.5 DeoR family transcriptional regulator compare
BWI76_RS01080 -1.7 -5.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS07725 -1.7 -1.1 iron-enterobactin transporter permease compare
BWI76_RS15845 -1.7 -0.9 hypothetical protein compare
BWI76_RS27820 -1.6 -1.6 ilvB operon leader peptide IvbL compare
BWI76_RS08495 -1.6 -5.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS05410 -1.6 -4.7 2,5-didehydrogluconate reductase B compare
BWI76_RS04955 -1.6 -1.6 hypoxanthine phosphoribosyltransferase compare
BWI76_RS22625 -1.5 -1.5 transcriptional regulator compare
BWI76_RS08530 -1.5 -1.7 protein TolA compare
BWI76_RS19905 -1.5 -4.5 OmpK36 porin compare
BWI76_RS20140 -1.5 -4.1 NADH-quinone oxidoreductase subunit L compare
BWI76_RS15060 -1.5 -3.0 MarR family transcriptional regulator compare
BWI76_RS10435 -1.5 -1.9 suppressor for copper-sensitivity C compare
BWI76_RS09655 -1.5 -3.6 leucine-responsive regulatory protein compare
BWI76_RS10430 -1.5 -2.6 thiol:disulfide interchange protein DsbG compare
BWI76_RS20190 -1.5 -3.2 NADH-quinone oxidoreductase subunit A compare
BWI76_RS22650 -1.4 -4.3 lipoprotein NlpD compare
BWI76_RS24025 -1.4 -4.3 agmatinase compare
BWI76_RS27290 -1.4 -5.1 hypothetical protein compare
BWI76_RS11255 -1.4 -1.5 putrescine/spermidine ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms