Experiment set8IT021 for Klebsiella michiganensis M5al

Compare to:

LB with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS07465 +10.9 90.4 TetR family transcriptional regulator compare
BWI76_RS24075 +9.9 57.7 glutathione synthase compare
BWI76_RS22120 +9.6 82.6 glutamate--cysteine ligase compare
BWI76_RS26685 +7.2 41.3 glutathione-disulfide reductase compare
BWI76_RS27675 +5.8 47.8 EmrB/QacA family drug resistance transporter compare
BWI76_RS00140 +3.8 13.7 phosphate transport system regulator PhoU compare
BWI76_RS01070 +3.5 17.5 thiol reductase thioredoxin compare
BWI76_RS22090 +3.2 5.7 transcriptional regulator compare
BWI76_RS06535 +3.1 15.2 endopeptidase La compare
BWI76_RS06785 +2.3 11.0 DNA-binding transcriptional repressor AcrR compare
BWI76_RS21075 +1.6 1.1 membrane protein compare
BWI76_RS01385 +1.6 4.8 potassium transporter compare
BWI76_RS14075 +1.5 1.7 TetR family transcriptional regulator compare
BWI76_RS00025 +1.4 2.1 hypothetical protein compare
BWI76_RS20640 +1.4 8.1 cysteine synthase A compare
BWI76_RS05005 +1.4 5.3 polynucleotide adenylyltransferase compare
BWI76_RS06635 +1.4 1.5 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS22085 +1.3 2.4 L-valine transporter subunit YgaH compare
BWI76_RS12145 +1.3 1.9 hypothetical protein compare
BWI76_RS25285 +1.3 2.6 HPr family phosphocarrier protein compare
BWI76_RS10305 +1.3 4.8 transposase compare
BWI76_RS17910 +1.3 5.8 hypothetical protein compare
BWI76_RS18360 +1.2 1.6 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS11240 +1.2 4.0 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS12420 +1.2 2.2 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS25480 +1.2 4.0 ribonuclease E/G compare
BWI76_RS20995 +1.2 5.1 RNA degradosome polyphosphate kinase compare
BWI76_RS06680 +1.2 1.6 hypothetical protein compare
BWI76_RS17915 +1.2 3.6 membrane protein compare
BWI76_RS16455 +1.2 2.5 superoxide dismutase compare
BWI76_RS25070 +1.1 2.5 hypothetical protein compare
BWI76_RS22940 +1.1 2.2 DNA-binding transcriptional activator FucR compare
BWI76_RS19885 +1.1 4.1 multidrug ABC transporter permease/ATP-binding protein conserved
BWI76_RS17080 +1.1 4.9 hypothetical protein compare
BWI76_RS07470 +1.0 1.0 MBL fold metallo-hydrolase compare
BWI76_RS09335 +1.0 2.0 baseplate assembly protein W compare
BWI76_RS27450 +1.0 5.4 ferredoxin--NADP(+) reductase compare
BWI76_RS16655 +1.0 1.2 CatA-like O-acetyltransferase compare
BWI76_RS12855 +1.0 2.2 enamine deaminase RidA compare
BWI76_RS11440 +1.0 1.8 hypothetical protein compare
BWI76_RS05790 +1.0 2.3 phage DNA-binding protein compare
BWI76_RS24480 +1.0 4.8 undecaprenyl-diphosphatase compare
BWI76_RS16235 +1.0 3.6 membrane protein compare
BWI76_RS12045 +0.9 1.9 hypothetical protein compare
BWI76_RS03020 +0.9 1.0 tRNA hydroxylase compare
BWI76_RS11040 +0.9 4.3 ribonuclease E compare
BWI76_RS25980 +0.9 1.4 hypothetical protein compare
BWI76_RS04915 +0.9 2.9 hypothetical protein compare
BWI76_RS19955 +0.9 1.2 glycerophosphoryl diester phosphodiesterase compare
BWI76_RS20220 +0.9 1.7 sugar phosphatase compare
BWI76_RS19025 +0.9 5.6 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS12330 +0.9 1.3 hypothetical protein compare
BWI76_RS23655 +0.9 4.4 DeoR family transcriptional regulator compare
BWI76_RS26980 +0.9 1.3 cold-shock protein compare
BWI76_RS25475 +0.9 6.3 TIGR02099 family protein compare
BWI76_RS09305 +0.9 3.0 hypothetical protein compare
BWI76_RS21810 +0.8 1.7 universal stress protein compare
BWI76_RS21380 +0.8 3.6 uracil-DNA glycosylase compare
BWI76_RS11110 +0.8 2.8 cell division protein YceG compare
BWI76_RS14505 +0.8 2.5 salicylate synthase Irp9 compare
BWI76_RS23540 +0.8 1.1 putative lysine exporter protein compare
BWI76_RS19605 +0.8 3.9 CidB/LrgB family autolysis modulator compare
BWI76_RS02860 +0.8 0.8 glycine dehydrogenase compare
BWI76_RS15595 +0.8 4.8 hypothetical protein compare
BWI76_RS24270 +0.8 2.3 membrane protein compare
BWI76_RS05965 +0.8 1.7 hypothetical protein compare
BWI76_RS21505 +0.8 1.3 hypothetical protein compare
BWI76_RS22130 +0.8 1.9 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS27425 +0.8 1.9 DNA-directed RNA polymerase subunit omega compare
BWI76_RS13610 +0.8 2.0 sugar transporter compare
BWI76_RS01565 +0.8 1.8 NADH pyrophosphatase compare
BWI76_RS23595 +0.8 1.6 N-acetyltransferase compare
BWI76_RS21565 +0.8 1.3 outer membrane protein assembly factor BamE compare
BWI76_RS10920 +0.7 3.0 putative TetR family transcriptional regulator compare
BWI76_RS11250 +0.7 1.4 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS22600 +0.7 1.3 DNA mismatch repair protein MutS compare
BWI76_RS09695 +0.7 3.1 MFS transporter compare
BWI76_RS08315 +0.7 1.7 K+-transporting ATPase subunit B compare
BWI76_RS13990 +0.7 1.2 allophanate hydrolase compare
BWI76_RS16635 +0.7 3.3 carbonate dehydratase compare
BWI76_RS18235 +0.7 2.1 trehalose-phosphatase compare
BWI76_RS06435 +0.7 1.6 MFS transporter compare
BWI76_RS09390 +0.7 2.7 phage tail protein compare
BWI76_RS12375 +0.7 1.3 DNA-invertase hin compare
BWI76_RS16300 +0.7 2.7 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS03170 +0.7 2.1 hypothetical protein compare
BWI76_RS05570 +0.7 1.2 hypothetical protein compare
BWI76_RS11205 +0.7 1.9 transcription-repair coupling factor compare
BWI76_RS12155 +0.7 2.7 hypothetical protein compare
BWI76_RS15345 +0.7 1.0 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS08310 +0.7 1.7 potassium-transporting ATPase subunit C compare
BWI76_RS13370 +0.7 1.3 hypothetical protein compare
BWI76_RS05485 +0.7 4.4 transpeptidase compare
BWI76_RS01890 +0.7 2.1 transcriptional regulator Zur compare
BWI76_RS09030 +0.7 2.9 transpeptidase compare
BWI76_RS21980 +0.7 1.4 hypothetical protein compare
BWI76_RS19470 +0.7 1.8 DNA-binding response regulator compare
BWI76_RS01270 +0.7 3.3 hypothetical protein compare
BWI76_RS11675 +0.7 1.0 arginine N-succinyltransferase compare
BWI76_RS19670 +0.7 1.4 S-formylglutathione hydrolase compare
BWI76_RS01835 +0.6 1.3 chemotaxis protein CheW compare
BWI76_RS00865 +0.6 3.0 DNA-binding transcriptional regulator OxyR compare
BWI76_RS19600 +0.6 3.9 hypothetical protein compare
BWI76_RS15260 +0.6 1.3 hypothetical protein compare
BWI76_RS15015 +0.6 1.3 DUF2132 domain-containing protein compare
BWI76_RS26175 +0.6 1.7 DeoR/GlpR family transcriptional regulator compare
BWI76_RS04090 +0.6 3.6 ribosomal-protein-alanine N-acetyltransferase RimI compare
BWI76_RS11260 +0.6 1.5 hypothetical protein compare
BWI76_RS16260 +0.6 1.5 two-component sensor histidine kinase compare
BWI76_RS12745 +0.6 1.8 putative prophage membrane protein compare
BWI76_RS27660 +0.6 2.7 hypothetical protein compare
BWI76_RS19860 +0.6 1.4 hypothetical protein compare
BWI76_RS17945 +0.6 0.7 hypothetical protein compare
BWI76_RS22695 +0.6 2.5 sulfate adenylyltransferase compare
BWI76_RS07955 +0.6 0.9 nucleoside diphosphate kinase regulator compare
BWI76_RS11035 +0.6 2.4 putative LysR-family transcriptional regulator compare
BWI76_RS14935 +0.6 1.1 NIPSNAP family containing protein compare
BWI76_RS12790 +0.6 1.1 lactate dehydrogenase compare
BWI76_RS21245 +0.6 2.2 nitrogen regulatory protein P-II compare
BWI76_RS03300 +0.6 2.2 hypothetical protein compare
BWI76_RS21235 +0.6 1.1 hypothetical protein compare
BWI76_RS08380 +0.6 1.1 endonuclease VIII compare
BWI76_RS14750 +0.6 1.5 transcriptional regulator compare
BWI76_RS06335 +0.6 1.1 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS11810 +0.6 1.6 outer membrane protein OmpW compare
BWI76_RS10650 +0.6 1.4 PTS fructose-like transporter subunit EIIB compare
BWI76_RS24885 +0.6 0.9 PTS galactitol transporter subunit IIB compare
BWI76_RS20735 +0.6 0.7 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS07110 +0.6 2.7 DNA-binding protein compare
BWI76_RS07785 +0.6 1.3 transcriptional regulator compare
BWI76_RS06340 +0.6 0.9 hypothetical protein compare
BWI76_RS11125 +0.6 1.1 metal-dependent hydrolase compare
BWI76_RS14740 +0.6 1.9 LysR family transcriptional regulator compare
BWI76_RS02050 +0.6 1.1 CidA/LrgA family protein compare
BWI76_RS15725 +0.6 1.9 hypothetical protein compare
BWI76_RS09145 +0.6 1.8 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS12080 +0.6 2.0 hypothetical protein compare
BWI76_RS14265 +0.6 1.8 LysR family transcriptional regulator compare
BWI76_RS23580 +0.6 0.7 hypothetical protein compare
BWI76_RS22125 +0.6 0.9 membrane protein compare
BWI76_RS00565 +0.6 1.6 branched-chain amino acid transport compare
BWI76_RS24600 +0.6 1.5 dihydroxyacetone kinase compare
BWI76_RS13970 +0.6 1.4 ABC transporter compare
BWI76_RS25485 +0.6 1.1 septum formation protein Maf compare
BWI76_RS25655 +0.6 2.7 DNA topoisomerase type IA zn finger domain-containing protein compare
BWI76_RS16035 +0.6 1.3 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS03660 +0.6 2.2 hypothetical protein compare
BWI76_RS18870 +0.6 1.0 protein NifZ compare
BWI76_RS18770 +0.6 0.9 DNA gyrase inhibitor compare
BWI76_RS05955 +0.6 1.4 ABC transporter compare
BWI76_RS27875 +0.6 0.4 membrane protein compare
BWI76_RS02595 +0.6 2.7 hypothetical protein compare
BWI76_RS08650 +0.6 0.6 molybdate ABC transporter permease compare
BWI76_RS19325 +0.6 1.2 mandelate racemase compare
BWI76_RS17550 +0.6 2.4 oxidoreductase (Fe-S)-binding subunit compare
BWI76_RS22685 +0.6 3.1 hypothetical protein compare
BWI76_RS18695 +0.6 1.6 GntR family transcriptional regulator compare
BWI76_RS13515 +0.6 2.0 amino acid permease compare
BWI76_RS24335 +0.6 1.0 two-component system response regulator QseB compare
BWI76_RS26405 +0.6 0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS14290 +0.6 2.1 AAA family ATPase compare
BWI76_RS17875 +0.6 2.2 L-serine ammonia-lyase compare
BWI76_RS04840 +0.6 2.5 prepilin peptidase-dependent pilin compare
BWI76_RS14350 +0.6 2.7 hypothetical protein compare
BWI76_RS17100 +0.6 2.1 glutathione peroxidase compare
BWI76_RS12750 +0.5 1.6 hypothetical protein compare
BWI76_RS15605 +0.5 1.5 hypothetical protein compare
BWI76_RS15785 +0.5 1.4 replication protein compare
BWI76_RS14460 +0.5 2.0 MurR/RpiR family transcriptional regulator compare
BWI76_RS10465 +0.5 1.5 hypothetical protein compare
BWI76_RS13490 +0.5 1.4 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS16895 +0.5 0.5 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS21480 +0.5 3.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS08715 +0.5 3.1 acyl-CoA thioesterase compare
BWI76_RS19615 +0.5 2.2 vancomycin high temperature exclusion protein compare
BWI76_RS15290 +0.5 0.9 transcriptional regulator compare
BWI76_RS10575 +0.5 0.4 polar amino acid ABC transporter permease compare
BWI76_RS09905 +0.5 2.1 FMN reductase (NADPH) compare
BWI76_RS21340 +0.5 1.1 SoxR reducing system protein RseC compare
BWI76_RS12380 +0.5 2.0 DNA polymerase V subunit UmuD compare
BWI76_RS03610 +0.5 1.9 hypothetical protein compare
BWI76_RS19105 +0.5 2.7 GalU regulator GalF compare
BWI76_RS19785 +0.5 2.1 microcin C ABC transporter permease YejB compare
BWI76_RS13660 +0.5 1.3 nitrate reductase subunit beta compare
BWI76_RS14555 +0.5 2.6 Yersiniabactin/pesticin outer membrane receptor (IRPC) compare
BWI76_RS24105 +0.5 1.3 resistance protein compare
BWI76_RS24620 +0.5 1.6 PadR family transcriptional regulator compare
BWI76_RS01065 +0.5 1.9 ATP-dependent RNA helicase RhlB compare
BWI76_RS20120 +0.5 3.2 fimbrial protein compare
BWI76_RS13775 +0.5 0.7 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS14970 +0.5 1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS13715 +0.5 1.9 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS15530 +0.5 1.6 hypothetical protein compare
BWI76_RS24940 +0.5 1.9 hypothetical protein compare
BWI76_RS12235 +0.5 1.2 hypothetical protein compare
BWI76_RS04580 +0.5 2.7 L-ribulose-5-phosphate 4-epimerase compare
BWI76_RS12985 +0.5 1.0 transcriptional regulator compare
BWI76_RS24295 +0.5 1.6 AraC family transcriptional regulator compare
BWI76_RS13945 +0.5 2.3 lysine exporter protein LysE/YggA compare
BWI76_RS16475 +0.5 2.2 alkene reductase compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms