| | gene | name | fitness | t score | description | |
|---|
| DVU_tRNA-Thr-1 | tRNA-Thr | +1.8 | 2.2 | tRNA with anticodon GGT for Thr (VIMSS-AUTO) | compare |
| DVU0047 | | +1.6 | 8.0 | flagellar protein FliL (TIGR) | compare |
| DVU2045 | | +1.6 | 9.4 | hypothetical protein (TIGR) | compare |
| DVU2894 | flrA | +1.5 | 12.1 | sigma-54 dependent transcriptional regulator (TIGR) | compare |
| DVU1863 | | +1.4 | 6.6 | flagellar synthesis regulator FleN, putative (TIGR) | compare |
| DVU0311 | | +1.4 | 11.3 | flagellar assembly protein FliH, putative (TIGR) | compare |
| DVU3234 | | +1.3 | 8.3 | flagellar biosynthetic protein FliR (TIGR) | compare |
| DVU0315 | flgC | +1.3 | 9.5 | flagellar basal-body rod protein FlgC (TIGR) | compare |
| DVU0045 | | +1.3 | 7.7 | flagellar biosynthesis protein, FliO, putative (TIGR) | compare |
| DVU0044 | fliP | +1.3 | 11.2 | flagellar biosynthetic protein fliP (TIGR) | compare |
| DVU0913 | | +1.3 | 8.1 | conserved hypothetical protein (TIGR) | compare |
| DVU3233 | flhB | +1.2 | 9.3 | flagellar biosynthetic protein FlhB (TIGR) | compare |
| DVU0043 | fliQ | +1.2 | 7.5 | flagellar biosynthetic protein FliQ (TIGR) | compare |
| DVU0313 | fliF | +1.2 | 9.0 | flagellar M-ring protein FliF (TIGR) | compare |
| DVU0513 | flgG | +1.2 | 9.4 | flagellar basal-body rod protein FlgG (TIGR) | compare |
| DVU0310 | fliI | +1.2 | 9.9 | flagellum-specific ATP synthase FliI (TIGR) | compare |
| DVU0314 | fliE | +1.2 | 7.1 | flagellar basal body component FliE (TIGR) | compare |
| DVU0312 | fliG | +1.2 | 10.0 | flagellar motor switch protein FliG (TIGR) | compare |
| DVU0522 | yviF | +1.2 | 6.2 | conserved hypothetical protein (TIGR) | compare |
| DVU1862 | | +1.2 | 5.5 | GGDEF domain protein (TIGR) | compare |
| DVU0512 | flgF | +1.1 | 7.8 | flagellar basal-body rod protein, putative (TIGR) | compare |
| DVU0514 | | +1.1 | 7.0 | FlgA family protein (TIGR) | compare |
| DVU0046 | fliN | +1.1 | 7.9 | flagellar motor switch protein FliN (TIGR) | compare |
| DVU2847 | | +1.1 | 5.7 | hypothetical protein (TIGR) | compare |
| DVU3232 | flhA | +1.1 | 9.0 | flagellar biosynthetic protein FlhA (TIGR) | compare |
| DVU0910 | fliM | +1.1 | 6.2 | flagellar motor switch protein FliM (TIGR) | compare |
| DVU0516 | flgI | +1.1 | 6.9 | flagellar P-ring protein FlgI (TIGR) | compare |
| DVU2048 | | +1.1 | 0.9 | hypothetical protein (TIGR) | compare |
| DVU1359 | | +1.0 | 7.5 | hypothetical protein (TIGR) | compare |
| DVU0515 | flgH | +1.0 | 6.9 | flagellar L-ring protein FlgH (TIGR) | compare |
| DVU2867 | | +1.0 | 1.7 | holin (TIGR) | compare |
| DVU0912 | | +1.0 | 3.5 | conserved domain protein (TIGR) | compare |
| DVU3387 | | +1.0 | 7.6 | hypothetical protein (TIGR) | compare |
| DVU1682 | | +1.0 | 4.0 | GAF domain protein (TIGR) | compare |
| DVU0307 | | +1.0 | 8.0 | flagella basal body rod domain protein (TIGR) | compare |
| DVU2896 | | +0.9 | 7.9 | TPR domain protein (TIGR) | compare |
| DVU0518 | | +0.9 | 6.5 | hypothetical protein (TIGR) | compare |
| DVU1444 | flgD | +0.9 | 6.4 | basal-body rod modification protein FlgD (TIGR) | compare |
| DVU0316 | flgB | +0.9 | 3.6 | flagellar basal-body rod protein FlgB (TIGR) | compare |
| DVU1409 | | +0.9 | 2.8 | hypothetical protein (TIGR) | compare |
| DVU1465 | | +0.9 | 7.9 | CgeB family protein (TIGR) | compare |
| DORF11799 | | +0.9 | 2.9 | no description | compare |
| DVU3227 | | +0.8 | 5.3 | flagellar basal body-associated protein, putative (TIGR) | compare |
| DVU1446 | | +0.8 | 4.3 | heptosyltransferase family protein (TIGR) | compare |
| DVU0863 | | +0.8 | 6.9 | flagellar hook-associated protein 2, putative (TIGR) | compare |
| DVU0793 | | +0.8 | 1.6 | hypothetical protein (TIGR) | compare |
| DVU0410 | | +0.8 | 4.4 | hypothetical protein (TIGR) | compare |
| DVU3229 | fliA | +0.8 | 3.6 | RNA polymerase sigma factor for flagellar operon FliA (TIGR) | compare |
| DVU2608 | motA-3 | +0.8 | 6.2 | chemotaxis protein MotA (TIGR) | compare |
| DVU0519 | | +0.8 | 6.6 | flagellar hook-associated protein FlgK, putative (TIGR) | compare |
| DVU0858 | | +0.8 | 5.5 | lipoprotein, putative (TIGR) | compare |
| DVU2609 | | +0.8 | 6.0 | chemotaxis MotB protein, putative (TIGR) | compare |
| DVU1443 | flgE | +0.7 | 4.4 | flagellar hook protein FlgE (TIGR) | compare |
| DVU0411 | | +0.7 | 5.4 | heptosyltransferase family protein (TIGR) | compare |
| DVU1063 | flrC | +0.7 | 4.4 | transcriptional regulatory protein (TIGR) | compare |
| DVU1445 | | +0.7 | 5.1 | flagellar hook-length control domain protein (TIGR) | compare |
| DVU1464 | | +0.7 | 5.4 | heptosyltransferase family protein (TIGR) | compare |
| DVU0909 | | +0.7 | 3.3 | hypothetical protein (TIGR) | compare |
| DVU0520 | | +0.7 | 5.9 | flagellar hook-associated protein FlgL, putative (TIGR) | compare |
| DVU1434 | | +0.7 | 0.8 | hypothetical protein (TIGR) | compare |
| DORF8192 | | +0.7 | 2.1 | SEED: FIG00606834: hypothetical protein | compare |
| DVU3225 | | +0.7 | 3.4 | hypothetical protein (TIGR) | compare |
| DVU0295 | | +0.7 | 5.5 | amine oxidase, flavin-containing (TIGR) | compare |
| DVU2669 | | +0.7 | 2.0 | conserved domain protein (TIGR) | compare |
| DVU1389 | | +0.7 | 3.8 | hypothetical protein (TIGR) | compare |
| DVU1251 | | +0.7 | 4.2 | hypothetical protein (TIGR) | compare |
| DVU1335 | clpP | +0.7 | 2.4 | ATP-dependent Clp protease, proteolytic subunit (TIGR) | compare |
| DVU2290 | | +0.7 | 0.6 | hydrogenase, CooU subunit, putative (TIGR) | compare |
| DVU0764 | hup-2 | +0.6 | 2.6 | DNA-binding protein HU (TIGR) | compare |
| DVU3067 | hypF | +0.6 | 1.2 | [NiFe] hydrogenase maturation protein HypF (TIGR) | compare |
| DVU1521 | | +0.6 | 0.4 | hypothetical protein (TIGR) | compare |
| DVU1449 | | +0.6 | 3.3 | anti-anti-sigma factor, putative (TIGR) | compare |
| DVU1844 | | +0.6 | 0.6 | septum formation initiator family protein (TIGR) | compare |
| DVU1853 | | +0.6 | 1.0 | hypothetical protein (TIGR) | compare |
| DVU3287 | | +0.6 | 4.9 | glycosyl transferase, group 2 family protein (TIGR) | compare |
| DVU2444 | flaB3 | +0.6 | 2.1 | flagellin (TIGR) | compare |
| DVU2454 | | +0.6 | 0.5 | hypothetical protein (TIGR) | compare |
| DVU1447 | | +0.6 | 4.1 | CgeB family protein (TIGR) | compare |
| DORF18707 | | +0.6 | 0.6 | no description | compare |
| DVU0318 | | +0.6 | 2.8 | TPR domain protein (TIGR) | compare |
| DVU2055 | metG | +0.6 | 0.8 | methionyl-tRNA synthetase (TIGR) | compare |
| DVU1944 | oorD | +0.6 | 1.1 | pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) | compare |
| DVU0475 | | +0.6 | 1.1 | membrane protein, putative, truncation (TIGR) | compare |
| DVU0862 | | +0.6 | 2.9 | flagellar protein FliS/hypothetical protein, fusion (TIGR) | compare |
| DORF43335 | | +0.6 | 0.9 | no description | compare |
| DVU1875 | | +0.6 | 1.6 | dafA protein (TIGR) | compare |
| DVU0698 | rfbC | +0.5 | 4.3 | dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) | compare |
| DVU1589 | | +0.5 | 2.6 | hypothetical protein (TIGR) | compare |
| DVU3231 | | +0.5 | 4.0 | flagellar biosynthesis protein FlhF, putative (TIGR) | compare |
| DVU2198 | | +0.5 | 0.5 | hypothetical protein (TIGR) | compare |
| DVU0097 | potB | +0.5 | 3.0 | polyamine ABC transporter, permease protein (TIGR) | compare |
| DVU2211 | | +0.5 | 4.4 | hypothetical protein (TIGR) | compare |
| DVU2021 | | +0.5 | 1.0 | hypothetical protein (TIGR) | compare |
| DVU3133 | glpF | +0.5 | 1.5 | glycerol uptake facilitator protein (TIGR) | compare |
| DVU1493 | | +0.5 | 1.2 | hypothetical protein (TIGR) | compare |
| DVU2112 | | +0.5 | 1.6 | hypothetical protein (TIGR) | compare |
| DVU1237 | glnP | +0.5 | 1.6 | amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) | compare |
| DORF13021 | | +0.5 | 1.0 | no description | compare |
| DVU2881 | | +0.5 | 1.5 | phage/plasmid primase, P4 family (TIGR) | compare |
| DVU2323 | | +0.4 | 1.8 | hypothetical protein (TIGR) | compare |
| DVU1222 | | +0.4 | 1.4 | hypothetical protein (TIGR) | compare |
| DVU3007 | | +0.4 | 2.9 | hypothetical protein (TIGR) | compare |
| DVU0556 | | +0.4 | 0.4 | ISDvu3, transposase OrfA (TIGR) | compare |
| DVU1520 | | +0.4 | 0.5 | hypothetical protein (TIGR) | compare |
| DORF12461 | | +0.4 | 1.6 | SEED: HigA protein (antitoxin to HigB) | compare |
| DVU1470 | ppiC | +0.4 | 1.4 | peptidyl-prolyl cis-trans isomerase C (TIGR) | compare |
| DVU3005 | rfbE | +0.4 | 2.7 | aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) | compare |
| DORF12360 | | +0.4 | 2.1 | SEED: FIG00605053: hypothetical protein | compare |
| DVU2875 | | +0.4 | 1.5 | DNA-binding domain, excisionase family (TIGR) | compare |
| DVU1441 | flaB1 | +0.4 | 1.8 | flagellin (TIGR) | compare |
| DORF41147 | | +0.4 | 0.6 | no description | compare |
| DVU2703 | | +0.4 | 0.5 | hypothetical protein (TIGR) | compare |
| DVU1336 | clpX | +0.4 | 2.7 | ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) | compare |
| DVU0196 | | +0.4 | 0.6 | hypothetical protein (TIGR) | compare |
| DVU1948 | | +0.4 | 1.8 | conserved hypothetical protein (TIGR) | compare |
| DVU2567 | lysX | +0.4 | 1.5 | predicted transcriptional regulator for lysine biosynthesis and transport (Dmitry Rodionov) | compare |
| DVU2761 | | +0.4 | 0.4 | hypothetical protein (TIGR) | compare |
| DVU2289 | b2488 | +0.4 | 0.4 | hydrogenase, CooX subunit, putative (TIGR) | compare |
| DVU1363 | rfbD | +0.4 | 2.5 | dTDP-4-dehydrorhamnose reductase (TIGR) | compare |
| DVU1567 | | +0.4 | 2.0 | hypothetical protein (TIGR) | compare |
| DVU1182 | | +0.4 | 2.7 | hypothetical protein (TIGR) | compare |
| DVU3020 | | +0.4 | 1.8 | hypothetical protein (TIGR) | compare |
| DVU1393 | | +0.4 | 1.5 | hypothetical protein (TIGR) | compare |
| DVU1003 | | +0.4 | 2.6 | dnaJ domain protein (TIGR) | compare |
| DORF14945 | | +0.4 | 1.4 | no description | compare |
| DVU0784 | | +0.4 | 1.3 | conserved hypothetical protein (TIGR) | compare |
| DVU0757 | | +0.4 | 1.7 | hypothetical protein (TIGR) | compare |
| DORF28911 | | +0.4 | 2.2 | SEED: FIG00602256: hypothetical protein | compare |
| DVU2328 | hypA | +0.4 | 0.9 | hydrogenase nickel insertion protein HypA, putative (TIGR) | compare |
| DVU1221 | | +0.4 | 0.5 | hypothetical protein (TIGR) | compare |
| DVU1384 | pyrR | +0.4 | 1.2 | pyrimidine operon regulatory protein (TIGR) | compare |
| DVU1091 | | +0.4 | 2.5 | conserved hypothetical protein (TIGR) | compare |
| DVU1536 | mltC | +0.4 | 1.6 | transglycosylase, SLT family (TIGR) | compare |
| DVU2475 | | +0.4 | 1.9 | oxidoreductase, NAD-binding, putative (TIGR) | compare |
| DVU0517 | | +0.4 | 2.2 | peptidase, M23/M37 family (TIGR) | compare |
| DVU3318 | | +0.4 | 1.1 | hypothetical protein (TIGR) | compare |
| DVU3223 | aspB | +0.4 | 2.4 | aspartate aminotransferase (TIGR) | compare |
| DVU1922 | hynA-1 | +0.4 | 2.7 | periplasmic [NiFe] hydrogenase, large subunit, isozyme 1 (TIGR) | compare |
| DVU0586 | | +0.4 | 1.5 | hypothetical protein (TIGR) | compare |
| DVU0547 | | +0.4 | 2.1 | high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) | compare |
| DVU0034 | | +0.4 | 2.0 | DSBA-like thioredoxin domain protein (TIGR) | compare |
| DVU2107 | | +0.4 | 1.8 | hypothetical protein (TIGR) | compare |
| DVU2866 | | +0.4 | 1.5 | conserved hypothetical protein (TIGR) | compare |
| DVU3329 | | +0.4 | 1.0 | hypothetical protein (TIGR) | compare |
| DVU2474 | | +0.3 | 0.9 | hypothetical protein (TIGR) | compare |
| DVU2398 | | +0.3 | 1.6 | conserved hypothetical protein (TIGR) | compare |
| DVU1630 | ptsN | +0.3 | 0.5 | PTS system, IIA component (TIGR) | compare |
| DVU0572 | | +0.3 | 1.8 | hypothetical protein (TIGR) | compare |
| DVU1080 | | +0.3 | 1.1 | iron-sulfur cluster-binding protein (TIGR) | compare |
| DVU1339 | | +0.3 | 1.9 | lipoprotein, putative (TIGR) | compare |
| DVU0716 | livF | +0.3 | 1.8 | branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) | compare |
| DVU2318 | rbr2 | +0.3 | 2.3 | rubrerythrin, putative (TIGR) | compare |
| DVU1129 | | +0.3 | 1.3 | conserved hypothetical protein (TIGR) | compare |
| DVU0012 | | +0.3 | 1.8 | hypothetical protein (TIGR) | compare |
| DVU2600 | | +0.3 | 1.3 | hypothetical protein (TIGR) | compare |
| DVU2742 | livM | +0.3 | 2.0 | high-affinity branched chain amino acid ABC transporter, permease protein (TIGR) | compare |
| DVU3274 | | +0.3 | 1.3 | hypothetical protein (TIGR) | compare |
| DVU2957 | | +0.3 | 0.3 | hypothetical protein (TIGR) | compare |
| DVU2774 | | +0.3 | 1.4 | CBS domain protein/ACT domain protein (TIGR) | compare |
| DVUA0105 | | +0.3 | 1.7 | conserved hypothetical protein (TIGR) | compare |
| DVU0920 | atpI | +0.3 | 0.9 | ATP synthase protein I (TIGR) | compare |
| DVU1985 | | +0.3 | 1.1 | conserved domain protein (TIGR) | compare |
| DVU0257 | | +0.3 | 0.7 | acetyltransferase, GNAT family (TIGR) | compare |
| DVU2606 | | +0.3 | 1.3 | hypothetical protein (TIGR) | compare |
| DORF32061 | | +0.3 | 1.3 | SEED: FIG00604583: hypothetical protein | compare |
| DVU2871 | | +0.3 | 1.4 | minor capsid protein C (TIGR) | compare |
| DVU2097 | | +0.3 | 0.8 | transcriptional regulator, putative (TIGR) | compare |
| DVU1410 | | +0.3 | 2.1 | conserved domain protein (TIGR) | compare |
| DVU1971 | | +0.3 | 1.3 | conserved domain protein (TIGR) | compare |
| DVU3011 | | +0.3 | 2.0 | conserved hypothetical protein (TIGR) | compare |
| DVU2740 | livF | +0.3 | 1.7 | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) | compare |
| DVU0104 | | +0.3 | 1.4 | cation ABC transporter, permease protein, putative (TIGR) | compare |
| DVU2553 | nifU-3 | +0.3 | 0.8 | NifU family protein (TIGR) | compare |
| DVU0524 | | +0.3 | 1.0 | hypothetical protein (TIGR) | compare |
| DVU2267 | | +0.3 | 0.9 | hypothetical protein (TIGR) | compare |
| DVU0970 | | +0.3 | 1.0 | lipoprotein, putative (TIGR) | compare |
| DVUA0092 | | +0.3 | 1.7 | hypothetical protein (TIGR) | compare |
| DVU2293 | cooF | +0.3 | 0.5 | iron-sulfur protein CooF (TIGR) | compare |
| DVU2391 | | +0.3 | 0.3 | hypothetical protein (TIGR) | compare |
| DVU3364 | | +0.3 | 1.4 | conserved hypothetical protein (TIGR) | compare |
| DVU2582 | | +0.3 | 1.3 | transcriptional regulator, TetR family (TIGR) | compare |
| DVU1267 | | +0.3 | 1.4 | hypothetical protein (TIGR) | compare |
| DVU1593 | cheY-1 | +0.3 | 0.9 | chemotaxis protein CheY (TIGR) | compare |
| DVU3123 | | +0.3 | 1.1 | HD domain protein (TIGR) | compare |
| DVU0946 | | +0.3 | 1.0 | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | compare |
| DVU1531 | | +0.3 | 1.5 | methyltransferase, putative (TIGR) | compare |
| DVU0736 | purN | +0.3 | 1.4 | phosphoribosylglycinamide formyltransferase (TIGR) | compare |
| DVU2999 | | +0.3 | 1.1 | methionyl-tRNA formyltransferase, putative (TIGR) | compare |
| DVU2741 | livG | +0.3 | 1.7 | high-affinity branched chain amino acid ABC transporter, ATP-binding protein (TIGR) | compare |
| DVU0305 | fd II | +0.3 | 0.8 | ferredoxin II (Sean Caffrey) | compare |
| DVU0550 | livG | +0.3 | 1.8 | high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) | compare |
| DVU2439 | | +0.3 | 1.9 | efflux transporter, RND family, MFP subunit (TIGR) | compare |
| DVU2184 | | +0.3 | 1.5 | DNA-binding domain, excisionase family (TIGR) | compare |
| DVU0117 | | +0.3 | 1.7 | glycosyl transferase, group 2 family protein (TIGR) | compare |
| DVU0569 | flrA | +0.3 | 2.2 | sigma-54 dependent transcriptional regulator (TIGR) | compare |
| DVU3299 | | +0.3 | 0.7 | membrane protein, putative (TIGR) | compare |
| DVU0534 | hmcC | +0.3 | 1.5 | HmcC, 43.2 kd protein in hmc operon (voordouw) | compare |
| DVU2744 | | +0.3 | 2.1 | high-affinity branched-chain amino acid ABC transporter, perisplasmic amino acid binding protein (TIGR) | compare |
| DVU2566 | lysA-2 | +0.3 | 0.6 | diaminopimelate decarboxylase (TIGR) | compare |
| DVUA0121 | | +0.3 | 1.9 | type III secretion system protein, YopQ family (TIGR) | compare |