Experiment set8IT018 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with L-Cysteine as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU2747 +6.9 47.1 hypothetical protein (TIGR) compare
DVU2045 +3.2 22.5 hypothetical protein (TIGR) compare
DVU2894 flrA +3.0 21.4 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU1863 +2.6 10.3 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0793 +2.6 5.7 hypothetical protein (TIGR) compare
DVU1631 +2.5 12.0 conserved hypothetical protein (TIGR) compare
DVU0313 fliF +2.5 16.8 flagellar M-ring protein FliF (TIGR) compare
DVU0043 fliQ +2.4 20.2 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0312 fliG +2.4 14.2 flagellar motor switch protein FliG (TIGR) compare
DVU0044 fliP +2.3 16.6 flagellar biosynthetic protein fliP (TIGR) compare
DVU1862 +2.2 8.5 GGDEF domain protein (TIGR) compare
DVU0311 +2.2 13.7 flagellar assembly protein FliH, putative (TIGR) compare
DVU3234 +2.1 7.8 flagellar biosynthetic protein FliR (TIGR) compare
DVU0047 +2.1 10.1 flagellar protein FliL (TIGR) compare
DVU0910 fliM +2.1 13.4 flagellar motor switch protein FliM (TIGR) compare
DVU2609 +2.1 14.8 chemotaxis MotB protein, putative (TIGR) compare
DVU3233 flhB +2.0 14.4 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0310 fliI +2.0 13.9 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0045 +2.0 6.7 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0314 fliE +2.0 8.7 flagellar basal body component FliE (TIGR) compare
DVU0316 flgB +2.0 6.6 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0315 flgC +2.0 12.1 flagellar basal-body rod protein FlgC (TIGR) compare
DVU3232 flhA +2.0 14.8 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0046 fliN +1.9 11.1 flagellar motor switch protein FliN (TIGR) compare
DVU3314 +1.8 6.3 peptidase, U32 family (TIGR) compare
DVU1063 flrC +1.8 12.9 transcriptional regulatory protein (TIGR) compare
DVU0698 rfbC +1.8 12.9 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0514 +1.7 9.1 FlgA family protein (TIGR) compare
DVU3227 +1.7 8.3 flagellar basal body-associated protein, putative (TIGR) compare
DVU0516 flgI +1.7 10.7 flagellar P-ring protein FlgI (TIGR) compare
DVU0513 flgG +1.7 12.8 flagellar basal-body rod protein FlgG (TIGR) compare
DVU0512 flgF +1.7 8.7 flagellar basal-body rod protein, putative (TIGR) compare
DVU2896 +1.7 13.6 TPR domain protein (TIGR) compare
DVU0913 +1.7 6.2 conserved hypothetical protein (TIGR) compare
DVU2608 motA-3 +1.6 9.6 chemotaxis protein MotA (TIGR) compare
DVU0515 flgH +1.6 9.7 flagellar L-ring protein FlgH (TIGR) compare
DVU3229 fliA +1.6 9.4 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0912 +1.5 6.4 conserved domain protein (TIGR) compare
DVU2867 +1.4 2.3 holin (TIGR) compare
DVU1465 +1.4 9.4 CgeB family protein (TIGR) compare
DVU0410 +1.4 7.5 hypothetical protein (TIGR) compare
DVU0858 +1.4 8.1 lipoprotein, putative (TIGR) compare
DVU3387 +1.3 8.6 hypothetical protein (TIGR) compare
DVU1337 lon +1.3 9.1 ATP-dependent protease La (TIGR) compare
DVU1363 rfbD +1.3 8.8 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0519 +1.3 11.3 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU1445 +1.3 7.4 flagellar hook-length control domain protein (TIGR) compare
DVU0863 +1.3 10.4 flagellar hook-associated protein 2, putative (TIGR) compare
DVU1444 flgD +1.2 5.5 basal-body rod modification protein FlgD (TIGR) compare
DVU0520 +1.2 8.3 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU2444 flaB3 +1.2 5.2 flagellin (TIGR) compare
DVU0842 +1.2 3.9 hypothetical protein (TIGR) compare
DVU1632 +1.2 2.4 PTS system, IIA component (TIGR) compare
DVU0971 +1.2 5.3 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU0715 livG +1.1 3.8 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU1443 flgE +1.1 6.6 flagellar hook protein FlgE (TIGR) compare
DVU2990 moeA +1.1 8.9 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU2510 +1.1 1.1 penicillin-binding protein (TIGR) compare
DVU0307 +1.1 7.4 flagella basal body rod domain protein (TIGR) compare
DVU0518 +1.1 6.0 hypothetical protein (TIGR) compare
DVU1377 ilvN-2 +1.1 1.5 acetolactate synthase, small subunit (TIGR) compare
DVU1251 +1.1 2.0 hypothetical protein (TIGR) compare
DVU3022 +1.1 0.7 sensory box histidine kinase/response regulator (TIGR) compare
DVU0409 +1.1 2.7 hypothetical protein (TIGR) compare
DVU0580 moaA +1.0 5.2 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU0339 serA +1.0 5.6 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU3223 aspB +1.0 4.7 aspartate aminotransferase (TIGR) compare
DVU0951 moeA-2 +1.0 5.2 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU1875 +1.0 2.0 dafA protein (TIGR) compare
DVU1407 +1.0 3.1 radical SAM domain protein (TIGR) compare
DORF8192 +1.0 1.2 SEED: FIG00606834: hypothetical protein compare
DVU2112 +1.0 2.0 hypothetical protein (TIGR) compare
DVU1179 aor +1.0 5.9 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DORF12455 +0.9 1.7 SEED: helix-turn-helix protein, CopG family compare
DVUA0070 +0.9 2.9 conserved domain protein (TIGR) compare
DVU1186 mazG +0.9 1.6 phosphoribosyl-ATP diphosphatase (EC 3.6.1.31) (from data) compare
DVU0298 +0.9 3.0 hypothetical protein (TIGR) compare
DVU0522 yviF +0.9 3.1 conserved hypothetical protein (TIGR) compare
DVU1078 +0.9 6.5 R3H domain protein (TIGR) compare
DVU2847 +0.9 4.2 hypothetical protein (TIGR) compare
DVU2083 relA +0.9 3.5 GTP pyrophosphokinase (TIGR) compare
DVU3329 +0.9 1.9 hypothetical protein (TIGR) compare
DVU1944 oorD +0.9 1.4 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU0289 moaC +0.9 5.4 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU0862 +0.9 3.9 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU1838 trxB-2 +0.9 1.8 thioredoxin reductase (TIGR) compare
DVU3277 +0.9 0.9 hypothetical protein (TIGR) compare
DVU2021 +0.9 1.3 hypothetical protein (TIGR) compare
DVU1359 +0.9 4.7 hypothetical protein (TIGR) compare
DVU0713 livH +0.8 5.1 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0318 +0.8 1.3 TPR domain protein (TIGR) compare
DVU1449 +0.8 2.8 anti-anti-sigma factor, putative (TIGR) compare
DVU0712 +0.8 5.3 amino acid ABC transporter, periplasmic-binding protein (TIGR) compare
DVU0300 +0.8 0.9 radical SAM domain protein (TIGR) compare
DVU1092 +0.8 6.3 sodium-dependent symporter family protein (TIGR) compare
DVU1577 hslV +0.8 2.3 ATP-dependent protease hslV (TIGR) compare
DVU0484 +0.8 1.9 ABC transporter, ATP-binding protein (TIGR) compare
DVU3193 +0.8 5.0 DNA-binding domain, excisionase family (TIGR) compare
DVU1629 yfiA +0.8 3.8 ribosomal subunit interface protein (TIGR) compare
DVU0295 +0.8 5.6 amine oxidase, flavin-containing (TIGR) compare
DORF13021 +0.8 0.9 no description compare
DVU1682 +0.8 2.3 GAF domain protein (TIGR) compare
DVU1799 fusA-2 +0.8 3.7 translation elongation factor G (TIGR) compare
DVUA0006 mgtE +0.8 2.2 magnesium transporter MgtE, putative (TIGR) compare
DVU0714 livM +0.8 4.9 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1338 +0.7 4.2 conserved hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.7 2.7 flagellin (TIGR) compare
DVU2946 +0.7 2.1 hypothetical protein (TIGR) compare
DVU0524 +0.7 1.9 hypothetical protein (TIGR) compare
DVU3020 +0.7 3.5 hypothetical protein (TIGR) compare
DVU3360 parB +0.7 3.6 ParB family protein (TIGR) compare
DVU1520 +0.7 0.6 hypothetical protein (TIGR) compare
DVU0074 +0.7 2.5 polysaccharide biosynthesis domain protein (TIGR) compare
DVU2553 nifU-3 +0.7 1.4 NifU family protein (TIGR) compare
DORF38058 +0.7 0.9 SEED: FIG00604017: hypothetical protein compare
DVU1536 mltC +0.7 2.0 transglycosylase, SLT family (TIGR) compare
DVU0989 +0.7 1.6 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU3260 +0.7 1.3 hypothetical protein (TIGR) compare
DVU1491 +0.7 1.7 conserved hypothetical protein (TIGR) compare
DVU2211 +0.7 5.4 hypothetical protein (TIGR) compare
DORF18707 +0.7 0.5 no description compare
DVU2999 +0.6 1.5 methionyl-tRNA formyltransferase, putative (TIGR) compare
DVU2206 +0.6 3.6 conserved hypothetical protein (TIGR) compare
DVU1061 +0.6 1.9 glycosyl transferase, group 1 family protein (TIGR) compare
DVU2323 +0.6 2.0 hypothetical protein (TIGR) compare
DVU1221 +0.6 1.7 hypothetical protein (TIGR) compare
DVU0703 lepA +0.6 1.0 GTP-binding protein LepA (TIGR) compare
DVU2203 +0.6 1.6 endoribonuclease, L-PSP family (TIGR) compare
DVU1695 +0.6 1.6 tail fiber assembly protein, putative (TIGR) compare
DVU1600 +0.6 3.7 adenylate cyclase (TIGR) compare
DVU1859 +0.6 1.2 hypothetical protein (TIGR) compare
DVU1446 +0.6 4.1 heptosyltransferase family protein (TIGR) compare
DVU_tRNA-Thr-1 tRNA-Thr +0.6 0.4 tRNA with anticodon GGT for Thr (VIMSS-AUTO) compare
DVU3010 lpsC +0.6 3.3 aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) compare
DVU2606 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1744 +0.6 1.6 DNA-binding protein (TIGR) compare
DORF20226 +0.6 1.2 no description compare
DVU0829 ptsI +0.6 2.0 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU3225 +0.6 1.7 hypothetical protein (TIGR) compare
DVU2539 +0.6 0.6 hypothetical protein (TIGR) compare
DVU1971 +0.6 1.7 conserved domain protein (TIGR) compare
DVU2578 +0.6 4.1 response regulator (TIGR) compare
DVU3119 +0.6 3.4 AMP-binding enzyme family protein (TIGR) compare
DVU3287 +0.6 4.4 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1372 +0.6 2.5 membrane protein, putative (TIGR) compare
DVU1961 cheW-3 +0.6 1.4 chemotaxis protein CheW (TIGR) compare
DVU2212 +0.6 3.0 conserved hypothetical protein (TIGR) compare
DVU0716 livF +0.6 2.6 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU1982 rhlE +0.6 2.7 ATP-dependent RNA helicase RhlE (TIGR) compare
DVU2223 +0.6 0.7 hypothetical protein (TIGR) compare
DVU0794 fabI +0.6 1.7 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU1384 pyrR +0.5 0.8 pyrimidine operon regulatory protein (TIGR) compare
DVU1174 +0.5 0.7 hypothetical protein (TIGR) compare
DORF12461 +0.5 0.8 SEED: HigA protein (antitoxin to HigB) compare
DVU2177 +0.5 0.5 hypothetical protein (TIGR) compare
DVU0859 +0.5 2.7 hypothetical protein (TIGR) compare
DVU1129 +0.5 1.8 conserved hypothetical protein (TIGR) compare
DVU0967 +0.5 2.8 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU3299 +0.5 1.5 membrane protein, putative (TIGR) compare
DVU1666 efp +0.5 2.1 translation elongation factor P (TIGR) compare
DVU0909 +0.5 2.6 hypothetical protein (TIGR) compare
DVU1676 secG +0.5 1.8 preprotein translocase, SecG subunit (TIGR) compare
DORF35977 +0.5 3.9 no description compare
DVU1237 glnP +0.5 1.2 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0533 hmcD +0.5 0.7 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU1844 +0.5 0.4 septum formation initiator family protein (TIGR) compare
DVU0747 cysA +0.5 1.8 ABC transporter, ATP-binding protein (TIGR) compare
DVU0223 +0.5 1.0 conserved hypothetical protein (TIGR) compare
DORF768 +0.5 1.3 no description compare
DVU1621 +0.5 1.8 hypothetical protein (TIGR) compare
DVU2400 +0.5 1.0 hydrogenase, putative (TIGR) compare
DVU0586 +0.5 0.8 hypothetical protein (TIGR) compare
DVU2113 +0.5 3.1 xanthine/uracil permease family protein (TIGR) compare
DVU0475 +0.5 0.8 membrane protein, putative, truncation (TIGR) compare
DVU2417 +0.5 0.8 SlyX protein (TIGR) compare
DVU1270 pilT-1 +0.5 3.2 twitching motility protein (TIGR) compare
DVU1470 ppiC +0.5 1.7 peptidyl-prolyl cis-trans isomerase C (TIGR) compare
DVU2725 +0.5 0.4 membrane protein, putative (TIGR) compare
DVU3011 +0.5 3.1 conserved hypothetical protein (TIGR) compare
DVU1442 +0.5 1.3 flagellin FlaG, putative (TIGR) compare
DVU1593 cheY-1 +0.5 1.0 chemotaxis protein CheY (TIGR) compare
DVU2703 +0.5 0.5 hypothetical protein (TIGR) compare
DORF807 +0.5 1.0 no description compare
DVU1283 galU +0.5 1.2 UTP-glucose-1-phosphate uridylyltransferase (TIGR) compare
DVU2016 +0.5 1.4 GGDEF domain protein (TIGR) compare
DVU0970 +0.5 1.2 lipoprotein, putative (TIGR) compare
DVU0461 +0.5 0.3 predicted 3-dehydroquinate synthase (TIGR) compare
DVU1653 +0.4 1.4 polyA polymerase family protein (TIGR) compare
DVU2788 smtB +0.4 2.0 transcriptional regulator, ArsR family (TIGR) compare
DVU1419 atoC +0.4 1.4 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU1068 +0.4 1.4 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU2674 sdhB +0.4 1.3 succinate dehydrogenase and fumarate reductase iron-sulfur protein (TIGR) compare
DVU2650 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2659 +0.4 1.0 exsB protein (TIGR) compare
DVU3214 +0.4 2.7 phosphoenolpyruvate synthase-related protein (TIGR) compare
DORF32061 +0.4 1.5 SEED: FIG00604583: hypothetical protein compare
DVU3001 +0.4 2.4 conserved domain protein (TIGR) compare
DVU3085 +0.4 0.6 hypothetical protein (TIGR) compare
DVU2682 +0.4 1.2 DedA family protein (TIGR) compare
DVUA0146 +0.4 1.5 hypothetical protein (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms