Experiment set8IT017 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with L-Cysteine as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU2747 +7.2 50.0 hypothetical protein (TIGR) compare
DVU2045 +3.0 20.4 hypothetical protein (TIGR) compare
DVU2894 flrA +2.6 16.2 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU1631 +2.5 11.4 conserved hypothetical protein (TIGR) compare
DVU1863 +2.3 9.8 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0793 +2.0 2.8 hypothetical protein (TIGR) compare
DVU0313 fliF +2.0 14.4 flagellar M-ring protein FliF (TIGR) compare
DVU1862 +2.0 11.5 GGDEF domain protein (TIGR) compare
DVU0316 flgB +2.0 6.4 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0047 +1.9 8.0 flagellar protein FliL (TIGR) compare
DVU0312 fliG +1.9 9.9 flagellar motor switch protein FliG (TIGR) compare
DVU0043 fliQ +1.8 13.9 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2609 +1.8 11.7 chemotaxis MotB protein, putative (TIGR) compare
DVU0044 fliP +1.8 8.9 flagellar biosynthetic protein fliP (TIGR) compare
DVU3233 flhB +1.8 12.4 flagellar biosynthetic protein FlhB (TIGR) compare
DVU3227 +1.7 8.7 flagellar basal body-associated protein, putative (TIGR) compare
DVU0045 +1.7 4.7 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0311 +1.7 8.8 flagellar assembly protein FliH, putative (TIGR) compare
DVU0310 fliI +1.6 12.6 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0910 fliM +1.6 9.5 flagellar motor switch protein FliM (TIGR) compare
DVU1337 lon +1.6 12.0 ATP-dependent protease La (TIGR) compare
DVU0315 flgC +1.6 10.1 flagellar basal-body rod protein FlgC (TIGR) compare
DVU3234 +1.6 7.6 flagellar biosynthetic protein FliR (TIGR) compare
DVU0314 fliE +1.6 5.1 flagellar basal body component FliE (TIGR) compare
DVU0046 fliN +1.5 7.0 flagellar motor switch protein FliN (TIGR) compare
DVU3232 flhA +1.5 11.4 flagellar biosynthetic protein FlhA (TIGR) compare
DVU1063 flrC +1.5 10.6 transcriptional regulatory protein (TIGR) compare
DVU0516 flgI +1.4 9.8 flagellar P-ring protein FlgI (TIGR) compare
DVU2608 motA-3 +1.4 8.3 chemotaxis protein MotA (TIGR) compare
DVU0515 flgH +1.4 9.0 flagellar L-ring protein FlgH (TIGR) compare
DVU0913 +1.4 5.1 conserved hypothetical protein (TIGR) compare
DVU2236 +1.3 1.4 hypothetical protein (TIGR) compare
DVU0698 rfbC +1.3 5.8 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU3314 +1.3 4.8 peptidase, U32 family (TIGR) compare
DVU0512 flgF +1.3 6.6 flagellar basal-body rod protein, putative (TIGR) compare
DVU2896 +1.3 10.7 TPR domain protein (TIGR) compare
DVU0971 +1.3 5.8 molybdenum cofactor biosynthesis protein (TIGR) compare
DORF8192 +1.1 2.2 SEED: FIG00606834: hypothetical protein compare
DVU0514 +1.1 6.0 FlgA family protein (TIGR) compare
DVU0513 flgG +1.1 7.6 flagellar basal-body rod protein FlgG (TIGR) compare
DVU1632 +1.1 2.8 PTS system, IIA component (TIGR) compare
DVU3260 +1.1 2.3 hypothetical protein (TIGR) compare
DVU1154 +1.1 1.2 hypothetical protein (TIGR) compare
DVU0410 +1.1 5.2 hypothetical protein (TIGR) compare
DVU0300 +1.1 1.2 radical SAM domain protein (TIGR) compare
DVU1445 +1.1 6.0 flagellar hook-length control domain protein (TIGR) compare
DORF28817 +1.0 2.1 no description compare
DVU3229 fliA +1.0 5.8 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU1838 trxB-2 +1.0 1.8 thioredoxin reductase (TIGR) compare
DVU0519 +1.0 8.2 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU2990 moeA +1.0 7.8 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU2956 flrA +1.0 2.9 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0912 +1.0 3.3 conserved domain protein (TIGR) compare
DVU1384 pyrR +1.0 1.8 pyrimidine operon regulatory protein (TIGR) compare
DVU0580 moaA +1.0 5.3 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU0863 +1.0 7.3 flagellar hook-associated protein 2, putative (TIGR) compare
DVU2692 +1.0 0.9 conserved domain protein (TIGR) compare
DVU3387 +0.9 7.2 hypothetical protein (TIGR) compare
DORF38058 +0.9 1.4 SEED: FIG00604017: hypothetical protein compare
DVU3223 aspB +0.9 4.6 aspartate aminotransferase (TIGR) compare
DVU1571 rho +0.9 1.1 transcription termination factor Rho (TIGR) compare
DVU1465 +0.9 6.1 CgeB family protein (TIGR) compare
DVU0715 livG +0.9 3.2 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU0951 moeA-2 +0.9 4.3 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU1875 +0.9 2.2 dafA protein (TIGR) compare
DVU1682 +0.9 3.1 GAF domain protein (TIGR) compare
DVU3020 +0.9 4.1 hypothetical protein (TIGR) compare
DVU2112 +0.9 2.3 hypothetical protein (TIGR) compare
DVU1444 flgD +0.9 4.4 basal-body rod modification protein FlgD (TIGR) compare
DVU1363 rfbD +0.9 4.8 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0518 +0.9 5.6 hypothetical protein (TIGR) compare
DVU0307 +0.9 5.6 flagella basal body rod domain protein (TIGR) compare
DVU0520 +0.9 6.0 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU2867 +0.9 1.1 holin (TIGR) compare
DVU1078 +0.9 6.2 R3H domain protein (TIGR) compare
DVU0858 +0.8 4.8 lipoprotein, putative (TIGR) compare
DVU0339 serA +0.8 4.4 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU1179 aor +0.8 5.4 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU2473 +0.8 0.8 hypothetical protein (TIGR) compare
DVU1443 flgE +0.8 4.1 flagellar hook protein FlgE (TIGR) compare
DVU1092 +0.8 5.5 sodium-dependent symporter family protein (TIGR) compare
DVU2055 metG +0.8 0.9 methionyl-tRNA synthetase (TIGR) compare
DVU0556 +0.7 0.6 ISDvu3, transposase OrfA (TIGR) compare
DVU0522 yviF +0.7 4.0 conserved hypothetical protein (TIGR) compare
DVU3193 +0.7 4.4 DNA-binding domain, excisionase family (TIGR) compare
DVU1455 +0.7 1.1 conserved hypothetical protein (TIGR) compare
DVU1359 +0.7 4.2 hypothetical protein (TIGR) compare
DVU0920 atpI +0.7 1.4 ATP synthase protein I (TIGR) compare
DVU0714 livM +0.7 4.2 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0289 moaC +0.7 3.0 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU2223 +0.7 1.0 hypothetical protein (TIGR) compare
DVU2999 +0.7 1.8 methionyl-tRNA formyltransferase, putative (TIGR) compare
DVU1609 dapB +0.7 2.8 dihydrodipicolinate reductase (TIGR) compare
DVU1407 +0.7 2.4 radical SAM domain protein (TIGR) compare
DVU0716 livF +0.7 3.2 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2669 +0.7 1.7 conserved domain protein (TIGR) compare
DVU0989 +0.7 1.7 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU1449 +0.7 3.0 anti-anti-sigma factor, putative (TIGR) compare
DVU0859 +0.7 4.0 hypothetical protein (TIGR) compare
DVU0712 +0.7 4.4 amino acid ABC transporter, periplasmic-binding protein (TIGR) compare
DVU2083 relA +0.7 2.0 GTP pyrophosphokinase (TIGR) compare
DVU2847 +0.6 2.7 hypothetical protein (TIGR) compare
DVU0862 +0.6 2.6 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU2444 flaB3 +0.6 2.4 flagellin (TIGR) compare
DVU2400 +0.6 1.6 hydrogenase, putative (TIGR) compare
DVU1629 yfiA +0.6 2.8 ribosomal subunit interface protein (TIGR) compare
DVU3329 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1726 +0.6 0.9 hypothetical protein (TIGR) compare
DVU0533 hmcD +0.6 0.9 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DORF831 +0.6 0.7 SEED: FIG00602593: hypothetical protein compare
DVU0475 +0.6 1.2 membrane protein, putative, truncation (TIGR) compare
DVU1600 +0.6 3.2 adenylate cyclase (TIGR) compare
DVU1695 +0.6 1.6 tail fiber assembly protein, putative (TIGR) compare
DVU2021 +0.6 0.9 hypothetical protein (TIGR) compare
DVU1971 +0.6 2.3 conserved domain protein (TIGR) compare
DVU0987 +0.6 1.1 heavy metal-binding domain protein (TIGR) compare
DVU1251 +0.6 1.0 hypothetical protein (TIGR) compare
DVU1567 +0.5 2.5 hypothetical protein (TIGR) compare
DVU0013 +0.5 3.3 sensory box histidine kinase (TIGR) compare
DORF13021 +0.5 0.7 no description compare
DVU2323 +0.5 1.7 hypothetical protein (TIGR) compare
DVU1799 fusA-2 +0.5 2.7 translation elongation factor G (TIGR) compare
DVU3119 +0.5 2.9 AMP-binding enzyme family protein (TIGR) compare
DVU0629 +0.5 1.8 transcriptional regulator, TetR family (TIGR) compare
DVU0880 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0452 +0.5 2.8 hypothetical protein (TIGR) compare
DVU2674 sdhB +0.5 1.5 succinate dehydrogenase and fumarate reductase iron-sulfur protein (TIGR) compare
DVU0484 +0.5 1.2 ABC transporter, ATP-binding protein (TIGR) compare
DVU2206 +0.5 3.5 conserved hypothetical protein (TIGR) compare
DVU2715 +0.5 2.1 conserved hypothetical protein (TIGR) compare
DVU1944 oorD +0.5 0.7 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU0829 ptsI +0.5 1.8 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU0318 +0.5 1.0 TPR domain protein (TIGR) compare
DVU2276 +0.5 2.4 membrane protein, putative (TIGR) compare
DVUA0070 +0.5 0.9 conserved domain protein (TIGR) compare
DORF14945 +0.5 1.5 no description compare
DVU2289 b2488 +0.5 0.5 hydrogenase, CooX subunit, putative (TIGR) compare
DVU2947 +0.5 1.7 anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) compare
DVUA0031 +0.5 1.8 hypothetical protein (TIGR) compare
DORF35977 +0.5 3.9 no description compare
DVU2895 +0.5 1.8 hypothetical protein (TIGR) compare
DVU3360 parB +0.5 2.9 ParB family protein (TIGR) compare
DVU3134 glpK +0.5 2.3 glycerol kinase (TIGR) compare
DVU3225 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0295 +0.5 3.2 amine oxidase, flavin-containing (TIGR) compare
DVU2122 cpaF +0.5 2.5 type II/IV secretion system protein (TIGR) compare
DVU2220 +0.5 1.0 conserved hypothetical protein (TIGR) compare
DVU2539 +0.5 0.5 hypothetical protein (TIGR) compare
DVU0436 +0.5 0.6 transcriptional regulator, TetR family (TIGR) compare
DVU0713 livH +0.4 2.4 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU2117 +0.4 1.3 membrane protein, putative (TIGR) compare
DVU0830 ptsH +0.4 0.7 phosphocarrier protein HPr (TIGR) compare
DVU3299 +0.4 1.2 membrane protein, putative (TIGR) compare
DORF25031 +0.4 1.9 SEED: FIG00606465: hypothetical protein compare
DVU1794 +0.4 1.3 hypothetical protein (TIGR) compare
DVU0008 +0.4 0.3 hypothetical protein (TIGR) compare
DVU0035 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2553 nifU-3 +0.4 0.5 NifU family protein (TIGR) compare
DVU2592 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2211 +0.4 3.5 hypothetical protein (TIGR) compare
DVU0298 +0.4 1.2 hypothetical protein (TIGR) compare
DVU3200 recR +0.4 1.9 recombination protein RecR (TIGR) compare
DVU0983 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DVU2038 +0.4 1.5 hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.4 2.0 flagellin (TIGR) compare
DVU3011 +0.4 2.9 conserved hypothetical protein (TIGR) compare
DVU2212 +0.4 2.6 conserved hypothetical protein (TIGR) compare
DVU2484 +0.4 2.2 cytochrome c family protein (TIGR) compare
DVU0967 +0.4 2.5 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU2888 +0.4 1.6 cobalt ABC transporter, ATP-binding protein, putative (TIGR) compare
DVU0108 +0.4 1.3 hypothetical protein (TIGR) compare
DVU3214 +0.4 2.8 phosphoenolpyruvate synthase-related protein (TIGR) compare
DORF12455 +0.4 0.5 SEED: helix-turn-helix protein, CopG family compare
DVU2200 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0970 +0.4 1.3 lipoprotein, putative (TIGR) compare
DVU0386 glnH +0.4 2.2 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU0167 oppC +0.4 1.2 oligopeptide/dipeptide ABC transporter, permease protein (TIGR) compare
DVU1039 +0.4 0.9 lipoprotein, putative (TIGR) compare
DVU2695 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU3208 +0.4 0.8 membrane protein, putative (TIGR) compare
DVU2965 +0.4 2.6 hypothetical protein (TIGR) compare
DVU0221 +0.4 1.8 tail fiber assembly protein, putative (TIGR) compare
DORF768 +0.4 1.0 no description compare
DVU1589 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2846 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2583 +0.4 1.3 lipoprotein, putative (TIGR) compare
DVU1283 galU +0.4 1.4 UTP-glucose-1-phosphate uridylyltransferase (TIGR) compare
DVU0428 +0.4 1.3 conserved hypothetical protein (TIGR) compare
DVU1338 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU1973 +0.4 1.9 rhodanese-like domain protein (TIGR) compare
DVU3350 oorD +0.4 0.6 iron-sulfur cluster-binding protein (TIGR) compare
DVU2070 +0.4 1.2 TPR domain protein (TIGR) compare
DVU0136 +0.4 1.8 hypothetical protein (TIGR) compare
DVU1536 mltC +0.4 1.2 transglycosylase, SLT family (TIGR) compare
DVU1230 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0966 +0.4 1.8 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU2682 +0.4 1.4 DedA family protein (TIGR) compare
DVU2109 mrp +0.4 1.6 MTH1175-like domain family protein (TIGR) compare
DVU2578 +0.4 2.8 response regulator (TIGR) compare
DVU0909 +0.4 1.8 hypothetical protein (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms