Experiment set8IT016 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with L-Cysteine as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU2747 +3.8 27.5 hypothetical protein (TIGR) compare
DVU2045 +2.6 17.9 hypothetical protein (TIGR) compare
DVU2894 flrA +2.3 18.0 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0793 +2.2 8.8 hypothetical protein (TIGR) compare
DVU1631 +2.0 8.5 conserved hypothetical protein (TIGR) compare
DVU0313 fliF +2.0 13.9 flagellar M-ring protein FliF (TIGR) compare
DVU1863 +2.0 7.3 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0043 fliQ +1.9 9.2 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0044 fliP +1.9 14.1 flagellar biosynthetic protein fliP (TIGR) compare
DVU0312 fliG +1.8 11.9 flagellar motor switch protein FliG (TIGR) compare
DVU0315 flgC +1.7 12.4 flagellar basal-body rod protein FlgC (TIGR) compare
DVU1862 +1.7 7.4 GGDEF domain protein (TIGR) compare
DVU0047 +1.7 6.7 flagellar protein FliL (TIGR) compare
DVU3233 flhB +1.7 12.3 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0311 +1.6 9.6 flagellar assembly protein FliH, putative (TIGR) compare
DVU3234 +1.6 7.1 flagellar biosynthetic protein FliR (TIGR) compare
DVU0316 flgB +1.6 6.9 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0310 fliI +1.5 11.1 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0045 +1.5 4.8 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU2609 +1.5 6.7 chemotaxis MotB protein, putative (TIGR) compare
DVU0314 fliE +1.4 6.2 flagellar basal body component FliE (TIGR) compare
DVU3232 flhA +1.4 11.5 flagellar biosynthetic protein FlhA (TIGR) compare
DVU3227 +1.4 8.7 flagellar basal body-associated protein, putative (TIGR) compare
DVU0910 fliM +1.4 8.3 flagellar motor switch protein FliM (TIGR) compare
DVU2896 +1.4 11.4 TPR domain protein (TIGR) compare
DVU3314 +1.4 5.2 peptidase, U32 family (TIGR) compare
DVU0516 flgI +1.4 10.5 flagellar P-ring protein FlgI (TIGR) compare
DVU0514 +1.3 8.0 FlgA family protein (TIGR) compare
DVU1063 flrC +1.3 9.5 transcriptional regulatory protein (TIGR) compare
DVU0913 +1.3 5.4 conserved hypothetical protein (TIGR) compare
DVU0513 flgG +1.2 8.8 flagellar basal-body rod protein FlgG (TIGR) compare
DVU2608 motA-3 +1.2 8.3 chemotaxis protein MotA (TIGR) compare
DVU0046 fliN +1.2 7.0 flagellar motor switch protein FliN (TIGR) compare
DVU1455 +1.2 2.5 conserved hypothetical protein (TIGR) compare
DVU0512 flgF +1.2 6.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU0698 rfbC +1.2 7.7 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU1337 lon +1.2 8.5 ATP-dependent protease La (TIGR) compare
DVU0515 flgH +1.1 7.4 flagellar L-ring protein FlgH (TIGR) compare
DVU3022 +1.1 0.8 sensory box histidine kinase/response regulator (TIGR) compare
DVU0410 +1.1 6.0 hypothetical protein (TIGR) compare
DVU2990 moeA +1.0 8.4 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU1407 +1.0 5.1 radical SAM domain protein (TIGR) compare
DVUA0070 +1.0 1.8 conserved domain protein (TIGR) compare
DVU0519 +1.0 8.5 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU3223 aspB +1.0 5.1 aspartate aminotransferase (TIGR) compare
DVU3387 +1.0 6.8 hypothetical protein (TIGR) compare
DVU0971 +1.0 4.8 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU1465 +1.0 6.8 CgeB family protein (TIGR) compare
DVU3229 fliA +1.0 4.6 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU2444 flaB3 +0.9 5.5 flagellin (TIGR) compare
DVU1445 +0.9 5.4 flagellar hook-length control domain protein (TIGR) compare
DVU1363 rfbD +0.9 5.9 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0520 +0.9 6.9 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU0863 +0.9 7.3 flagellar hook-associated protein 2, putative (TIGR) compare
DVU0518 +0.9 5.9 hypothetical protein (TIGR) compare
DORF12455 +0.9 1.8 SEED: helix-turn-helix protein, CopG family compare
DVU1078 +0.9 6.5 R3H domain protein (TIGR) compare
DVU1682 +0.9 3.1 GAF domain protein (TIGR) compare
DVU1444 flgD +0.9 5.0 basal-body rod modification protein FlgD (TIGR) compare
DVU0339 serA +0.9 5.4 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU2553 nifU-3 +0.9 2.6 NifU family protein (TIGR) compare
DVU0858 +0.8 5.9 lipoprotein, putative (TIGR) compare
DVU0912 +0.8 1.8 conserved domain protein (TIGR) compare
DVU0580 moaA +0.8 4.6 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU1179 aor +0.8 5.2 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU0307 +0.8 5.8 flagella basal body rod domain protein (TIGR) compare
DVU1875 +0.8 2.1 dafA protein (TIGR) compare
DVU2206 +0.8 5.6 conserved hypothetical protein (TIGR) compare
DVU2112 +0.8 2.4 hypothetical protein (TIGR) compare
DVU1571 rho +0.8 1.0 transcription termination factor Rho (TIGR) compare
DVU1632 +0.8 1.8 PTS system, IIA component (TIGR) compare
DVU1251 +0.8 1.8 hypothetical protein (TIGR) compare
DORF8192 +0.8 2.0 SEED: FIG00606834: hypothetical protein compare
DVU1092 +0.8 6.5 sodium-dependent symporter family protein (TIGR) compare
DVU0951 moeA-2 +0.8 4.7 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU2956 flrA +0.7 2.0 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0715 livG +0.7 2.5 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU0989 +0.7 2.4 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU1443 flgE +0.7 4.7 flagellar hook protein FlgE (TIGR) compare
DVU3277 +0.7 0.8 hypothetical protein (TIGR) compare
DVU1728 +0.7 1.2 conserved hypothetical protein (TIGR) compare
DVU1799 fusA-2 +0.7 3.7 translation elongation factor G (TIGR) compare
DVU0484 +0.7 2.0 ABC transporter, ATP-binding protein (TIGR) compare
DVU0712 +0.7 4.2 amino acid ABC transporter, periplasmic-binding protein (TIGR) compare
DVU0289 moaC +0.7 3.5 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU1726 +0.7 1.2 hypothetical protein (TIGR) compare
DVU0716 livF +0.7 4.2 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2323 +0.7 2.1 hypothetical protein (TIGR) compare
DVU3193 +0.7 4.0 DNA-binding domain, excisionase family (TIGR) compare
DVU0713 livH +0.6 3.4 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU3260 +0.6 1.5 hypothetical protein (TIGR) compare
DVU2847 +0.6 2.9 hypothetical protein (TIGR) compare
DVU1237 glnP +0.6 2.2 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU3329 +0.6 1.2 hypothetical protein (TIGR) compare
DORF35977 +0.6 4.5 no description compare
DVU1449 +0.6 1.9 anti-anti-sigma factor, putative (TIGR) compare
DVU3364 +0.6 2.5 conserved hypothetical protein (TIGR) compare
DVU1944 oorD +0.6 0.8 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU0965 +0.6 0.8 hypothetical protein (TIGR) compare
DVU0862 +0.6 2.4 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU0074 +0.6 2.0 polysaccharide biosynthesis domain protein (TIGR) compare
DVU2391 +0.6 0.5 hypothetical protein (TIGR) compare
DVU1600 +0.6 3.6 adenylate cyclase (TIGR) compare
DVU1359 +0.6 3.4 hypothetical protein (TIGR) compare
DVU3360 parB +0.5 3.3 ParB family protein (TIGR) compare
DVU0008 +0.5 0.4 hypothetical protein (TIGR) compare
DVU1577 hslV +0.5 2.3 ATP-dependent protease hslV (TIGR) compare
DVU0714 livM +0.5 3.5 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0522 yviF +0.5 2.4 conserved hypothetical protein (TIGR) compare
DVU3020 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0829 ptsI +0.5 2.2 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU2021 +0.5 1.0 hypothetical protein (TIGR) compare
DVU1384 pyrR +0.5 0.9 pyrimidine operon regulatory protein (TIGR) compare
DVU3119 +0.5 3.4 AMP-binding enzyme family protein (TIGR) compare
DORF20226 +0.5 1.3 no description compare
DVU1520 +0.5 0.6 hypothetical protein (TIGR) compare
DVU2048 +0.5 0.3 hypothetical protein (TIGR) compare
DVU2306 +0.5 1.7 phosphate transporter family protein (TIGR) compare
DVU1434 +0.5 0.6 hypothetical protein (TIGR) compare
DVU1436 +0.5 0.7 hypothetical protein (TIGR) compare
DVU2606 +0.5 1.4 hypothetical protein (TIGR) compare
DVU2867 +0.5 0.7 holin (TIGR) compare
DVU3348 +0.5 0.6 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU1629 yfiA +0.5 3.2 ribosomal subunit interface protein (TIGR) compare
DVU0318 +0.5 0.8 TPR domain protein (TIGR) compare
DVU1796 +0.5 0.9 hypothetical protein (TIGR) compare
DVU0295 +0.5 3.5 amine oxidase, flavin-containing (TIGR) compare
DVU2377 +0.5 1.5 hypothetical protein (TIGR) compare
DVU1061 +0.5 1.4 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0359 +0.5 1.5 HesB-like domain (TIGR) compare
DVU3225 +0.5 1.5 hypothetical protein (TIGR) compare
DVU2417 +0.5 0.9 SlyX protein (TIGR) compare
DVU2400 +0.5 1.2 hydrogenase, putative (TIGR) compare
DVU2418 +0.5 1.6 vanZ-like family protein (TIGR) compare
DVU3133 glpF +0.5 1.1 glycerol uptake facilitator protein (TIGR) compare
DVU0488 purD +0.5 1.2 phosphoribosylamine--glycine ligase (TIGR) compare
DVU0842 +0.5 2.1 hypothetical protein (TIGR) compare
DVU1115 +0.5 1.9 conserved hypothetical protein (TIGR) compare
DVU2117 +0.5 1.6 membrane protein, putative (TIGR) compare
DVU2083 relA +0.5 1.5 GTP pyrophosphokinase (TIGR) compare
DORF768 +0.4 1.0 no description compare
DVU1336 clpX +0.4 2.1 ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) compare
DVU2250 +0.4 2.0 AMP-binding protein (TIGR) compare
DVU0794 fabI +0.4 1.4 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU0475 +0.4 1.0 membrane protein, putative, truncation (TIGR) compare
DVU2211 +0.4 3.5 hypothetical protein (TIGR) compare
DVU2578 +0.4 3.2 response regulator (TIGR) compare
DVU0517 +0.4 2.2 peptidase, M23/M37 family (TIGR) compare
DVU1744 +0.4 1.3 DNA-binding protein (TIGR) compare
DVU3214 +0.4 2.9 phosphoenolpyruvate synthase-related protein (TIGR) compare
DVU2566 lysA-2 +0.4 1.1 diaminopimelate decarboxylase (TIGR) compare
DVU0079 gufA +0.4 2.6 ZIP zinc transporter family protein (TIGR) compare
DVU1536 mltC +0.4 1.4 transglycosylase, SLT family (TIGR) compare
DVU2995 +0.4 2.9 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0859 +0.4 2.0 hypothetical protein (TIGR) compare
DVU2760 +0.4 1.7 hypothetical protein (TIGR) compare
DVU1076 +0.4 1.2 conserved hypothetical protein TIGR00278 (TIGR) compare
DVU1609 dapB +0.4 1.2 dihydrodipicolinate reductase (TIGR) compare
DVU2831 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2038 +0.4 1.7 hypothetical protein (TIGR) compare
DVU1419 atoC +0.4 1.7 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU3299 +0.4 1.0 membrane protein, putative (TIGR) compare
DVU2999 +0.4 1.1 methionyl-tRNA formyltransferase, putative (TIGR) compare
DVU2200 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0967 +0.4 2.7 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0970 +0.4 1.4 lipoprotein, putative (TIGR) compare
DVU1838 trxB-2 +0.4 0.8 thioredoxin reductase (TIGR) compare
DVU2401 +0.4 2.1 hydrogenase, iron-sulfur cluster-binding subunit, putative (TIGR) compare
DVU2567 lysX +0.4 1.4 predicted transcriptional regulator for lysine biosynthesis and transport (Dmitry Rodionov) compare
DVU2875 +0.4 1.0 DNA-binding domain, excisionase family (TIGR) compare
DVU0684 hflK +0.4 1.6 hflK protein, putative (TIGR) compare
DVU0830 ptsH +0.4 0.7 phosphocarrier protein HPr (TIGR) compare
DVU1567 +0.4 1.8 hypothetical protein (TIGR) compare
DVU0208 +0.4 1.8 hypothetical protein (TIGR) compare
DVU0452 +0.4 1.9 hypothetical protein (TIGR) compare
DVU0524 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1589 +0.4 2.5 hypothetical protein (TIGR) compare
DVU1030 +0.4 1.2 universal stress protein family (TIGR) compare
DVU2212 +0.4 2.9 conserved hypothetical protein (TIGR) compare
DVU0880 +0.4 1.2 hypothetical protein (TIGR) compare
DVU2473 +0.4 0.3 hypothetical protein (TIGR) compare
DVU3011 +0.4 2.6 conserved hypothetical protein (TIGR) compare
DVU1794 +0.4 1.1 hypothetical protein (TIGR) compare
DORF11799 +0.4 0.5 no description compare
DVUA0146 +0.4 1.5 hypothetical protein (TIGR) compare
DVU0097 potB +0.4 1.0 polyamine ABC transporter, permease protein (TIGR) compare
DVU1613 +0.4 1.8 pyridine nucleotide-disulfide oxidoreductase (TIGR) compare
DVU1039 +0.4 0.7 lipoprotein, putative (TIGR) compare
DVU1263 pppA +0.4 1.2 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU1338 +0.4 1.8 conserved hypothetical protein (TIGR) compare
DVU0486 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2861 +0.4 0.9 hypothetical protein (TIGR) compare
DVU0298 +0.3 1.0 hypothetical protein (TIGR) compare
DVU3274 +0.3 1.1 hypothetical protein (TIGR) compare
DVU3010 lpsC +0.3 2.1 aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) compare
DVU2736 +0.3 2.1 hypothetical protein (TIGR) compare
DVU1174 +0.3 0.8 hypothetical protein (TIGR) compare
DVU2070 +0.3 0.9 TPR domain protein (TIGR) compare
DVU1222 +0.3 1.0 hypothetical protein (TIGR) compare
DVU1257 +0.3 1.0 RNA-binding protein (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms