Experiment set8IT016 for Caulobacter crescentus NA1000

200 most detrimental genes:

gene	name	fitness	t score	description
CCNA_03913		+1.2	2.1	hypothetical protein
CCNA_03963		+1.0	3.9	hypothetical protein
CCNA_02732		+1.0	3.6	hypothetical protein
CCNA_03936		+0.9	3.4	hypothetical protein
CCNA_01851		+0.9	7.6	quinol cytochrome oxidase polypeptide II
CCNA_02644		+0.9	2.5	cell division protein FtsL
CCNA_02646		+0.9	2.1	cell division protein MraZ
CCNA_01849		+0.9	5.4	quinol cytochrome oxidase polypeptide III
CCNA_03961		+0.9	2.1	hypothetical protein
CCNA_01850		+0.9	7.4	quinol cytochrome oxidase polypeptide I
CCNA_02273		+0.9	5.6	glutathione peroxidase
CCNA_01949		+0.9	3.8	bactofilin A BacA
CCNA_01979		+0.9	4.7	LexA repressor
CCNA_01276		+0.9	4.0	cytochrome c5
CCNA_01393		+0.8	7.8	soluble lytic murein transglycosylase
CCNA_01712		+0.8	5.8	CopY/TcrY family transcriptional repressor
CCNA_03635		+0.8	1.9	hypothetical protein
CCNA_01780		+0.8	6.7	exopolyphosphatase
CCNA_01840		+0.8	6.7	MerR-family transcriptional regulator
CCNA_03918		+0.8	1.6	hypothetical protein
CCNA_01913		+0.8	6.4	MarR-family transcriptional regulator
CCNA_00020		+0.8	2.1	hypothetical protein
CCNA_02103		+0.8	4.5	hypothetical protein
CCNA_00998		+0.8	5.2	ROS/MUCR transcriptional regulator
CCNA_03643		+0.8	1.3	succinate dehydrogenase membrane anchor subunit
CCNA_02330		+0.7	4.1	hypothetical protein
CCNA_03618		+0.7	5.5	SCO1/SenC family protein
CCNA_02534		+0.7	2.7	hypothetical protein
CCNA_01526		+0.7	3.2	flagellar biosynthesis regulatory protein flaF
CCNA_00807		+0.7	1.2	ribonuclease P protein component
CCNA_03287		+0.7	4.8	PadR-family transcriptional regulator
CCNA_01779		+0.7	3.6	hypothetical protein
CCNA_02063		+0.7	2.2	beta-barrel assembly machine (BAM) protein BamD
CCNA_01059		+0.7	6.3	S-layer protein rsaA
CCNA_01926		+0.7	4.3	GGDEF diguanylate cyclase DgcB
CCNA_02535		+0.7	0.9	DNA topoisomerase I
CCNA_02126		+0.7	0.9	hypothetical protein
CCNA_00047		+0.7	4.8	tRNA m7-G46 methyltransferase
CCNA_01541		+0.7	4.8	LysR-family transcriptional regulator
CCNA_01931		+0.7	4.4	TetR-family transcriptional regulator
CCNA_01024		+0.7	5.2	hypothetical protein
CCNA_03252		+0.7	3.3	CopY/TcrY-family transcriptional regulator
CCNA_01252		+0.7	6.1	soluble lytic murein transglycosylase
CCNA_01006		+0.7	3.9	flagellar hook-basal body complex protein FliE
CCNA_01848		+0.6	4.9	quinol cytochrome oxidase polypeptide IV
CCNA_R0037		+0.6	2.7	tRNA-Glu
CCNA_03379		+0.6	1.8	Cro/CI family transcriptional regulator
CCNA_01008		+0.6	5.5	urocanate hydratase
CCNA_01420		+0.6	2.8	NrdR family transcriptional regulator
CCNA_01531		+0.6	4.7	acetyltransferase
CCNA_01235		+0.6	4.6	AcrR-family transcriptional regulator
CCNA_02760		+0.6	2.4	hypothetical protein
CCNA_03951		+0.6	3.4	hypothetical protein
CCNA_03604		+0.6	4.2	hypothetical protein
CCNA_03612		+0.6	3.4	HTH XRE-family transcriptional regulator
CCNA_01533		+0.6	4.2	hypothetical protein
CCNA_01801		+0.6	3.1	hypothetical protein
CCNA_01790		+0.6	2.8	protein translocase subunit secG
CCNA_00860		+0.6	1.7	holdfast inhibitor protein HfiA
CCNA_01074		+0.6	2.5	entericidin B-like protein
CCNA_03893		+0.6	1.5	hypothetical protein
CCNA_01680		+0.6	4.4	succinylarginine dihydrolase
CCNA_01847		+0.6	4.6	cytochrome c oxidase assembly protein Surf1
CCNA_02447		+0.6	5.2	PspA/IM30 family regulatory protein
CCNA_03021		+0.6	2.7	hypothetical protein
CCNA_01412		+0.6	4.4	acyl-CoA dehydrogenase, short-chain specific
CCNA_03070		+0.6	2.3	4-oxalocrotonate tautomerase
CCNA_01367		+0.6	4.4	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
CCNA_02448		+0.6	5.1	hypothetical protein
CCNA_01684		+0.6	3.8	phenylalanine-4-hydroxylase
CCNA_02011		+0.6	3.3	methylmalonyl CoA epimerase
CCNA_02698		+0.6	4.0	Inosine-uridine nucleoside N-ribohydrolase
CCNA_00039		+0.6	4.3	hypothetical protein
CCNA_02324		+0.6	4.6	heat shock protein 33 hsp33
CCNA_02272		+0.6	3.5	hypothetical protein
CCNA_01013		+0.6	3.2	histidine utilization repressor
CCNA_00326		+0.6	4.3	vegetatible incompatibility protein HET-E-1
CCNA_02067		+0.6	2.9	conserved membrane spanning protein
CCNA_01414		+0.6	4.1	3-hydroxyisobutyryl-CoA hydrolase
CCNA_01578		+0.6	3.1	beta-lactamase repressor
CCNA_01181		+0.6	3.2	hypothetical protein
CCNA_02467		+0.6	4.0	polyisoprenylphosphate hexose-1-phosphotransferase pssZ
CCNA_01415		+0.6	4.3	methyltransferase
CCNA_03064		+0.6	3.1	PadR-family transcriptional regulator
CCNA_01963		+0.6	3.7	hypothetical protein
CCNA_00780		+0.6	4.6	N-formylglutamate deformylase
CCNA_01270		+0.6	2.1	hypothetical protein
CCNA_00153		+0.6	2.7	adenine nucleotide exchange factor GrpE
CCNA_00129		+0.6	2.9	hypothetical protein
CCNA_02243		+0.6	5.2	D-alanyl-D-alanine serine-type carboxypeptidase
CCNA_00149		+0.6	1.6	Cro/CI-family transcriptional regulator
CCNA_01001		+0.6	3.5	ribokinase
CCNA_03280		+0.6	5.2	pyruvate ferredoxin/flavodoxin oxidoreductase family protein
CCNA_02836		+0.5	3.1	hypothetical protein
CCNA_01679		+0.5	3.8	succinylglutamic semialdehyde dehydrogenase
CCNA_02000		+0.5	0.9	SSU ribosomal protein S2P
CCNA_02363		+0.5	3.1	hypothetical protein
CCNA_02309		+0.5	2.7	EF hand domain protein
CCNA_02597		+0.5	2.6	hypothetical protein
CCNA_01003		+0.5	2.7	flagellar biosynthesis protein FliO
CCNA_03876		+0.5	0.5	transcription termination factor rho
CCNA_01168		+0.5	1.5	3-ketoacyl-CoA thiolase
CCNA_01581		+0.5	1.3	hypothetical protein
CCNA_01752		+0.5	3.0	YicC-family protein
CCNA_00109		+0.5	3.7	thioredoxin
CCNA_01007		+0.5	2.6	hypothetical protein
CCNA_01406		+0.5	3.5	metal-dependent hydrolase
CCNA_00046		+0.5	3.6	hypothetical protein
CCNA_03123		+0.5	3.6	ArsR-family transcriptional regulator
CCNA_01405		+0.5	2.7	GIY-YIG domain protein
CCNA_03372		+0.5	2.6	bacterioferritin-associated ferredoxin
CCNA_01375		+0.5	2.4	lactoylglutathione lyase
CCNA_03515		+0.5	2.5	hypothetical protein
CCNA_00769		+0.5	4.1	TetR family transcriptional regulator
CCNA_01094		+0.5	2.2	hypothetical protein
CCNA_02425		+0.5	1.8	non-essential pilus assembly protein
CCNA_00699		+0.5	2.3	LSU ribosomal protein L28P
CCNA_01339		+0.5	3.4	ArsR-family transcriptional regulator
CCNA_00895		+0.5	3.2	hypothetical protein
CCNA_01413		+0.5	3.1	phosphoglycerate mutase family protein
CCNA_01445		+0.5	2.5	hypothetical protein
CCNA_01267		+0.5	2.9	NTF2 superfamily protein
CCNA_01004		+0.5	1.7	flagellar basal-body rod protein FlgB
CCNA_01655		+0.5	3.0	cyclophilin-type peptidylprolyl cis-trans isomerase
CCNA_00274		+0.5	1.9	hypothetical protein
CCNA_01014		+0.5	2.7	cysteinyl-tRNA(Pro) deacylase
CCNA_01505		+0.5	2.3	hypothetical protein
CCNA_00429		+0.5	2.4	hypothetical protein
CCNA_00527		+0.5	3.6	hypothetical protein
CCNA_01619		+0.5	2.8	NYN domain protein
CCNA_03062		+0.5	4.0	cell wall hydrolase family protein
CCNA_02339		+0.5	4.3	methyltransferase
CCNA_02114		+0.5	0.9	hypothetical protein
CCNA_03989		+0.5	3.9	MarR-family HTH transcriptional regulator / N-acyltransferase
CCNA_01000		+0.5	2.6	hypothetical protein
CCNA_01009		+0.5	3.4	N-formylglutamate deformylase
CCNA_02021		+0.5	1.4	hypothetical protein
CCNA_01927		+0.5	2.4	enoyl-CoA hydratase
CCNA_01333		+0.5	1.9	hypothetical protein
CCNA_01011		+0.5	3.0	imidazolonepropionase
CCNA_01742		+0.5	2.2	hypothetical protein
CCNA_03136		+0.5	2.0	flagellar export protein FliJ
CCNA_00790		+0.5	2.7	hypoxia negative feedback regulator FixT
CCNA_01341		+0.5	3.4	DegP/HtrA-family serine protease
CCNA_01366		+0.5	1.8	hypothetical protein
CCNA_01910		+0.5	0.7	ABC transporter substrate-binding protein
CCNA_01694		+0.5	3.6	CocE/NonD family hydrolase
CCNA_03818		+0.5	2.6	hypothetical protein
CCNA_03289		+0.5	3.2	HicB-family RNA-binding protein
CCNA_03321		+0.5	3.4	VanZ superfamily protein
CCNA_01923		+0.5	3.6	ATP-dependent RNA helicase
CCNA_01973		+0.5	2.3	hypothetical protein
CCNA_00701		+0.5	2.1	cold shock protein CspB
CCNA_01677		+0.5	2.7	carboxypeptidase G2 precursor
CCNA_02551		+0.5	2.6	hypothetical protein
CCNA_00053		+0.5	3.5	phosphate starvation-inducible protein PhoH
CCNA_00031		+0.5	3.3	toxin protein VapC
CCNA_00750		+0.5	3.5	FeaR-family transcriptional regulator
CCNA_03615		+0.5	4.3	TonB dependent receptor
CCNA_02328		+0.5	0.4	cell cycle regulatory protein GcrA
CCNA_02053		+0.5	2.5	hypothetical protein
CCNA_01575		+0.5	3.5	glucose / sorbosone dehydrogenase
CCNA_01968		+0.5	1.3	pentapeptide repeats containing protein
CCNA_02379		+0.5	3.3	hypothetical protein
CCNA_00676		+0.5	2.2	PSK-family transcription factor
CCNA_01573		+0.5	2.7	ArsR-family transcriptional regulator
CCNA_03016		+0.5	2.7	hypothetical protein
CCNA_03616		+0.5	3.9	PiuB-related membrane protein
CCNA_01638		+0.5	2.3	beta-lactamase family protein
CCNA_02580		+0.5	1.5	rubredoxin
CCNA_03391		+0.5	3.1	Cro/CI family transcriptional regulator
CCNA_02341		+0.4	2.3	small heat shock protein
CCNA_01751		+0.4	1.7	aminodeoxychorismate lyase
CCNA_03107		+0.4	2.6	cytidine deaminase
CCNA_00939		+0.4	3.3	MarR-family transcriptional regulator
CCNA_01278		+0.4	3.1	hypothetical protein
CCNA_03012		+0.4	2.7	peroxiredoxin
CCNA_01005		+0.4	2.9	flagellar basal-body rod protein flgC
CCNA_00498		+0.4	2.3	hypothetical protein
CCNA_01361		+0.4	1.3	PepSY superfamily protein
CCNA_01745		+0.4	2.6	thioredoxin peroxidase
CCNA_02664		+0.4	1.2	flagellar assembly regulator FliX
CCNA_02340		+0.4	3.0	methyltransferase
CCNA_02691		+0.4	3.0	TetR-family transcriptional regulator
CCNA_00352		+0.4	3.6	integral membrane protein
CCNA_03327		+0.4	2.9	hypothetical protein
CCNA_02042		+0.4	2.9	trigger factor chaperone
CCNA_01443		+0.4	2.1	hypothetical protein
CCNA_02250		+0.4	1.1	methylcrotonyl-CoA carboxylase biotin-containing subunit
CCNA_02387		+0.4	3.6	glutathione reductase
CCNA_01993		+0.4	3.3	membrane endopeptidase MmpA
CCNA_00051		+0.4	3.4	magnesium and cobalt efflux protein CorC
CCNA_01087		+0.4	3.2	hypothetical protein
CCNA_03667		+0.4	2.6	hypothetical protein
CCNA_01768		+0.4	1.6	hypothetical protein
CCNA_02728		+0.4	3.1	hypothetical protein
CCNA_03281		+0.4	3.1	AsnC-family transcriptional regulator
CCNA_03033		+0.4	3.3	Flp pilus assembly protein TadD
CCNA_02695		+0.4	2.1	hypothetical protein
CCNA_01480		+0.4	1.2	hypothetical protein

Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Streptomycin sulfate salt across organisms