Experiment set8IT015 for Caulobacter crescentus NA1000

Compare to:

24 hours of 100ug/mL streptomycin treatment after 3 hour phosphate starvation in M5G

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03918 +0.9 1.9 hypothetical protein compare
CCNA_03635 +0.9 2.2 hypothetical protein compare
CCNA_03515 +0.9 1.7 hypothetical protein compare
CCNA_01276 +0.8 3.3 cytochrome c5 compare
CCNA_03954 +0.8 1.8 hypothetical protein compare
CCNA_02646 +0.8 1.5 cell division protein MraZ compare
CCNA_01712 +0.7 6.0 CopY/TcrY family transcriptional repressor compare
CCNA_02103 +0.7 4.4 hypothetical protein compare
CCNA_02330 +0.7 4.1 hypothetical protein compare
CCNA_03936 +0.7 3.8 hypothetical protein compare
CCNA_03951 +0.7 3.6 hypothetical protein compare
CCNA_01801 +0.7 2.8 hypothetical protein compare
CCNA_03961 +0.7 2.7 hypothetical protein compare
CCNA_01851 +0.7 5.7 quinol cytochrome oxidase polypeptide II compare
CCNA_02063 +0.7 3.6 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01840 +0.7 5.6 MerR-family transcriptional regulator compare
CCNA_02311 +0.7 1.6 hypothetical protein compare
CCNA_01913 +0.6 5.1 MarR-family transcriptional regulator compare
CCNA_01531 +0.6 5.1 acetyltransferase compare
CCNA_01526 +0.6 2.8 flagellar biosynthesis regulatory protein flaF compare
CCNA_01006 +0.6 3.5 flagellar hook-basal body complex protein FliE compare
CCNA_01573 +0.6 4.1 ArsR-family transcriptional regulator compare
CCNA_01681 +0.6 3.3 RimI-like acetyltransferase compare
CCNA_01393 +0.6 5.7 soluble lytic murein transglycosylase compare
CCNA_01742 +0.6 3.0 hypothetical protein compare
CCNA_01684 +0.6 3.9 phenylalanine-4-hydroxylase compare
CCNA_01790 +0.6 2.7 protein translocase subunit secG compare
CCNA_01933 +0.6 3.5 hypothetical protein compare
CCNA_03965 +0.6 2.2 hypothetical protein compare
CCNA_01655 +0.6 3.7 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00684 +0.6 3.5 anti-sigma factor, ChrR-family compare
CCNA_01949 +0.6 1.9 bactofilin A BacA compare
CCNA_01094 +0.6 4.0 hypothetical protein compare
CCNA_02761 +0.6 3.2 hypothetical protein compare
CCNA_01848 +0.6 4.0 quinol cytochrome oxidase polypeptide IV compare
CCNA_03762 +0.6 1.2 acetolactate synthase-related protein compare
CCNA_01679 +0.6 3.8 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01963 +0.6 3.5 hypothetical protein compare
CCNA_01954 +0.6 3.8 ribonuclease E compare
CCNA_01457 +0.6 1.5 hypothetical protein compare
CCNA_01849 +0.6 3.5 quinol cytochrome oxidase polypeptide III compare
CCNA_02249 +0.6 2.1 conserved hypothetical cytosolic protein compare
CCNA_03913 +0.5 0.8 hypothetical protein compare
CCNA_01333 +0.5 3.8 hypothetical protein compare
CCNA_01367 +0.5 4.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
CCNA_02732 +0.5 3.9 hypothetical protein compare
CCNA_02004 +0.5 1.6 SOS-induced inhibitor of cell division SidA compare
CCNA_03919 +0.5 2.1 hypothetical protein compare
CCNA_03280 +0.5 5.0 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02036 +0.5 2.1 DNA-binding protein HU compare
CCNA_01445 +0.5 2.6 hypothetical protein compare
CCNA_02341 +0.5 2.5 small heat shock protein compare
CCNA_02250 +0.5 1.3 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_03959 +0.5 1.4 hypothetical protein compare
CCNA_01850 +0.5 4.3 quinol cytochrome oxidase polypeptide I compare
CCNA_01533 +0.5 3.5 hypothetical protein compare
CCNA_02339 +0.5 4.6 methyltransferase compare
CCNA_03643 +0.5 0.8 succinate dehydrogenase membrane anchor subunit compare
CCNA_02132 +0.5 2.5 LacI-family transcriptional regulator compare
CCNA_02671 +0.5 1.2 hypothetical protein compare
CCNA_01581 +0.5 1.3 hypothetical protein compare
CCNA_01619 +0.5 3.5 NYN domain protein compare
CCNA_02124 +0.5 3.0 hypothetical protein compare
CCNA_01804 +0.5 3.6 glutathione peroxidase compare
CCNA_02816 +0.5 1.5 hypothetical protein compare
CCNA_02957 +0.5 2.1 ArsR-family transcriptional regulator compare
CCNA_01013 +0.5 3.2 histidine utilization repressor compare
CCNA_01415 +0.5 3.8 methyltransferase compare
CCNA_00939 +0.5 2.7 MarR-family transcriptional regulator compare
CCNA_01059 +0.5 3.8 S-layer protein rsaA compare
CCNA_02697 +0.5 2.8 hypothetical protein compare
CCNA_03992 +0.5 0.7 UDP-glucose 6-dehydrogenase-related protein compare
CCNA_01235 +0.5 3.4 AcrR-family transcriptional regulator compare
CCNA_01779 +0.5 2.5 hypothetical protein compare
CCNA_01968 +0.5 1.6 pentapeptide repeats containing protein compare
CCNA_01014 +0.5 2.7 cysteinyl-tRNA(Pro) deacylase compare
CCNA_03287 +0.5 2.4 PadR-family transcriptional regulator compare
CCNA_01405 +0.5 2.6 GIY-YIG domain protein compare
CCNA_02805 +0.5 3.0 hypothetical protein compare
CCNA_01339 +0.5 2.8 ArsR-family transcriptional regulator compare
CCNA_01008 +0.5 4.0 urocanate hydratase compare
CCNA_01680 +0.5 3.5 succinylarginine dihydrolase compare
CCNA_01434 +0.5 2.8 MerR-family transcriptional regulator compare
CCNA_02728 +0.5 3.5 hypothetical protein compare
CCNA_01371 +0.5 2.1 hypothetical protein compare
CCNA_00527 +0.5 3.4 hypothetical protein compare
CCNA_01575 +0.5 3.6 glucose / sorbosone dehydrogenase compare
CCNA_01778 +0.5 3.6 penicillin-binding protein compare
CCNA_01392 +0.5 2.5 glycosyltransferase involved in cell wall biogenesis compare
CCNA_03123 +0.5 3.3 ArsR-family transcriptional regulator compare
CCNA_03129 +0.5 4.2 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_03289 +0.5 2.7 HicB-family RNA-binding protein compare
CCNA_02368 +0.5 3.8 alpha-glucosidase compare
CCNA_01979 +0.5 2.9 LexA repressor compare
CCNA_00919 +0.4 2.2 hypothetical protein compare
CCNA_00517 +0.4 0.9 peptidyl-tRNA hydrolase compare
CCNA_01412 +0.4 3.3 acyl-CoA dehydrogenase, short-chain specific compare
CCNA_03479 +0.4 3.4 MarR-family transcriptional regulator compare
CCNA_00114 +0.4 2.9 MarR/EmrR-family transcriptional regulator compare
CCNA_02619 +0.4 3.8 stomatin/prohibitin-related protein compare
CCNA_01527 +0.4 3.5 flagellin fljL compare
CCNA_01414 +0.4 3.3 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01541 +0.4 3.0 LysR-family transcriptional regulator compare
CCNA_00443 +0.4 3.3 chemotaxis protein cheW compare
CCNA_01677 +0.4 2.4 carboxypeptidase G2 precursor compare
CCNA_00409 +0.4 0.8 hypothetical protein compare
CCNA_01614 +0.4 0.7 hypothetical protein compare
CCNA_00147 +0.4 0.8 hypothetical protein compare
CCNA_00750 +0.4 3.4 FeaR-family transcriptional regulator compare
CCNA_02976 +0.4 3.1 MCP-signal associated domain protein compare
CCNA_02698 +0.4 3.3 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_03325 +0.4 2.2 hypothetical protein compare
CCNA_03252 +0.4 3.4 CopY/TcrY-family transcriptional regulator compare
CCNA_02010 +0.4 0.6 hypothetical protein compare
CCNA_01000 +0.4 2.2 hypothetical protein compare
CCNA_00946 +0.4 2.9 Basal-body rod modification protein FlgD compare
CCNA_01035 +0.4 3.5 gamma-glutamyltranspeptidase compare
CCNA_03989 +0.4 3.5 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01780 +0.4 3.2 exopolyphosphatase compare
CCNA_01252 +0.4 3.9 soluble lytic murein transglycosylase compare
CCNA_01910 +0.4 0.7 ABC transporter substrate-binding protein compare
CCNA_01923 +0.4 3.2 ATP-dependent RNA helicase compare
CCNA_00542 +0.4 1.9 hypothetical protein compare
CCNA_02367 +0.4 3.3 CelR-family transcriptional regulator compare
CCNA_01578 +0.4 2.5 beta-lactamase repressor compare
CCNA_01847 +0.4 3.0 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01818 +0.4 2.5 D-alanine aminotransferase compare
CCNA_02700 +0.4 3.4 xanthine dehydrogenase accessory protein XdhC compare
CCNA_02282 +0.4 2.0 hypothetical protein compare
CCNA_01580 +0.4 2.5 M15 superfamily membrane peptidase compare
CCNA_02448 +0.4 3.5 hypothetical protein compare
CCNA_02309 +0.4 1.1 EF hand domain protein compare
CCNA_00947 +0.4 3.3 flagellar hook protein FlgE compare
CCNA_00368 +0.4 3.1 phosphonates transport system permease protein phnE compare
CCNA_01278 +0.4 2.3 hypothetical protein compare
CCNA_01005 +0.4 3.1 flagellar basal-body rod protein flgC compare
CCNA_03034 +0.4 1.4 hypothetical protein compare
CCNA_00953 +0.4 2.5 flagellar motor switch protein FliN compare
CCNA_02098 +0.4 3.0 molybdopterin-guanine dinucleotide biosynthesis protein A compare
CCNA_00020 +0.4 0.8 hypothetical protein compare
CCNA_03612 +0.4 2.2 HTH XRE-family transcriptional regulator compare
CCNA_R0037 +0.4 1.6 tRNA-Glu compare
CCNA_00625 +0.4 3.1 two-component receiver domain protein compare
CCNA_01745 +0.4 2.4 thioredoxin peroxidase compare
CCNA_02408 +0.4 2.9 hypothetical protein compare
CCNA_02551 +0.4 2.1 hypothetical protein compare
CCNA_02748 +0.4 1.9 hypothetical protein compare
CCNA_01025 +0.4 2.8 hypothetical protein compare
CCNA_01772 +0.4 1.4 hypothetical protein compare
CCNA_02141 +0.4 2.2 flagellar fliL protein compare
CCNA_01347 +0.4 3.0 hypothetical protein compare
CCNA_00998 +0.4 2.4 ROS/MUCR transcriptional regulator compare
CCNA_01002 +0.4 2.8 flagellar biosyntheis protein FliP compare
CCNA_01530 +0.4 3.0 flagellin FljJ compare
CCNA_01962 +0.4 2.5 leucyl/phenylalanyl-tRNA--protein transferase compare
CCNA_02037 +0.4 1.9 ATP-dependent endopeptidase Lon compare
CCNA_00895 +0.4 2.9 hypothetical protein compare
CCNA_02040 +0.4 1.0 phosphoserine phosphatase compare
CCNA_00787 +0.4 2.9 chemotaxis motA protein compare
CCNA_01004 +0.4 1.6 flagellar basal-body rod protein FlgB compare
CCNA_01413 +0.4 2.4 phosphoglycerate mutase family protein compare
CCNA_03949 +0.4 2.3 hypothetical protein compare
CCNA_01420 +0.4 2.0 NrdR family transcriptional regulator compare
CCNA_03224 +0.4 1.4 hypothetical protein compare
CCNA_01820 +0.4 2.7 GTP-binding protein hflX compare
CCNA_03975 +0.4 1.3 hypothetical protein compare
CCNA_03968 +0.4 1.6 hypothetical protein compare
CCNA_01714 +0.4 2.5 Spx/MgsR-related protein compare
CCNA_01183 +0.4 2.9 zinc dependent phospholipase C/S1-P1 nuclease-family protein compare
CCNA_00949 +0.4 1.0 hypothetical protein compare
CCNA_01361 +0.4 0.9 PepSY superfamily protein compare
CCNA_02334 +0.4 2.4 transcriptional regulator of stalk biogenesis staR compare
CCNA_01752 +0.4 2.3 YicC-family protein compare
CCNA_02691 +0.4 2.8 TetR-family transcriptional regulator compare
CCNA_00769 +0.4 2.9 TetR family transcriptional regulator compare
CCNA_00153 +0.4 1.4 adenine nucleotide exchange factor GrpE compare
CCNA_03930 +0.4 2.2 hypothetical protein compare
CCNA_03938 +0.4 2.1 hypothetical protein compare
CCNA_01926 +0.4 2.2 GGDEF diguanylate cyclase DgcB compare
CCNA_01181 +0.4 2.2 hypothetical protein compare
CCNA_02273 +0.4 1.6 glutathione peroxidase compare
CCNA_02616 +0.4 2.7 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02125 +0.4 3.1 polar development protein podJ compare
CCNA_01143 +0.4 2.3 endoribonuclease L-PSP compare
CCNA_02379 +0.4 2.7 hypothetical protein compare
CCNA_01748 +0.4 2.7 methyltransferase compare
CCNA_01931 +0.4 2.3 TetR-family transcriptional regulator compare
CCNA_01699 +0.4 2.5 LacI-family transcriptional regulator compare
CCNA_02843 +0.4 1.3 toxin protein parE-3 compare
CCNA_01914 +0.4 2.8 16S rRNA m(2)G 1207 methyltransferase RsmC compare
CCNA_03321 +0.4 1.9 VanZ superfamily protein compare
CCNA_01024 +0.4 2.8 hypothetical protein compare
CCNA_02221 +0.4 3.0 methionine synthase I metH compare
CCNA_02285 +0.4 2.6 transcription elongation factor GreB compare
CCNA_00811 +0.4 2.4 TetR-family transcriptional regulator compare
CCNA_00440 +0.4 1.8 STAS domain protein compare
CCNA_R0047 +0.4 1.6 tRNA-Val compare
CCNA_02665 +0.4 3.0 flagellar P-ring protein FlgI compare
CCNA_01009 +0.4 2.7 N-formylglutamate deformylase compare
CCNA_01344 +0.4 2.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Streptomycin sulfate salt across organisms