Experiment set8IT014 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with Na2S as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU1631 +3.7 17.1 conserved hypothetical protein (TIGR) compare
DVU2747 +3.5 25.7 hypothetical protein (TIGR) compare
DVU2045 +2.1 12.2 hypothetical protein (TIGR) compare
DVU2894 flrA +2.1 12.1 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0311 +1.9 10.6 flagellar assembly protein FliH, putative (TIGR) compare
DVU0044 fliP +1.7 10.3 flagellar biosynthetic protein fliP (TIGR) compare
DVU1863 +1.7 6.3 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0313 fliF +1.7 10.7 flagellar M-ring protein FliF (TIGR) compare
DVU0315 flgC +1.7 13.8 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0043 fliQ +1.7 14.8 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0047 +1.7 6.5 flagellar protein FliL (TIGR) compare
DVU0310 fliI +1.6 10.4 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0316 flgB +1.5 5.6 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0312 fliG +1.5 7.0 flagellar motor switch protein FliG (TIGR) compare
DVU3233 flhB +1.5 9.6 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0314 fliE +1.5 6.7 flagellar basal body component FliE (TIGR) compare
DVU0516 flgI +1.5 10.2 flagellar P-ring protein FlgI (TIGR) compare
DVU0045 +1.5 5.1 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0513 flgG +1.4 9.3 flagellar basal-body rod protein FlgG (TIGR) compare
DVU3232 flhA +1.4 10.2 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0046 fliN +1.4 7.9 flagellar motor switch protein FliN (TIGR) compare
DVU0910 fliM +1.4 10.4 flagellar motor switch protein FliM (TIGR) compare
DVU3234 +1.4 4.6 flagellar biosynthetic protein FliR (TIGR) compare
DVU0912 +1.4 3.7 conserved domain protein (TIGR) compare
DVU0793 +1.3 2.3 hypothetical protein (TIGR) compare
DVU2867 +1.3 1.8 holin (TIGR) compare
DVU3227 +1.3 7.4 flagellar basal body-associated protein, putative (TIGR) compare
DVU0514 +1.3 7.5 FlgA family protein (TIGR) compare
DVU2609 +1.2 4.9 chemotaxis MotB protein, putative (TIGR) compare
DVU3229 fliA +1.2 6.8 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0512 flgF +1.2 5.7 flagellar basal-body rod protein, putative (TIGR) compare
DVU1862 +1.2 4.6 GGDEF domain protein (TIGR) compare
DVU2284 +1.2 7.0 hypothetical protein (TIGR) compare
DVU0515 flgH +1.2 5.8 flagellar L-ring protein FlgH (TIGR) compare
DVU2896 +1.1 8.1 TPR domain protein (TIGR) compare
DVU0339 serA +1.1 5.3 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU2608 motA-3 +1.1 6.6 chemotaxis protein MotA (TIGR) compare
DVU1063 flrC +1.1 5.9 transcriptional regulatory protein (TIGR) compare
DVU0913 +1.1 3.3 conserved hypothetical protein (TIGR) compare
DVU3387 +1.0 6.1 hypothetical protein (TIGR) compare
DVU0410 +1.0 4.7 hypothetical protein (TIGR) compare
DVU1682 +1.0 2.6 GAF domain protein (TIGR) compare
DVU1465 +1.0 6.6 CgeB family protein (TIGR) compare
DVU0519 +1.0 7.2 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU0520 +1.0 6.9 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU2567 lysX +1.0 2.5 predicted transcriptional regulator for lysine biosynthesis and transport (Dmitry Rodionov) compare
DVUA0070 +1.0 1.9 conserved domain protein (TIGR) compare
DVU0257 +0.9 1.8 acetyltransferase, GNAT family (TIGR) compare
DVU1251 +0.9 1.5 hypothetical protein (TIGR) compare
DVU2112 +0.9 2.3 hypothetical protein (TIGR) compare
DVU1875 +0.9 1.3 dafA protein (TIGR) compare
DVU0863 +0.9 7.3 flagellar hook-associated protein 2, putative (TIGR) compare
DVU1445 +0.9 5.8 flagellar hook-length control domain protein (TIGR) compare
DVU3329 +0.9 1.3 hypothetical protein (TIGR) compare
DVU0858 +0.9 4.3 lipoprotein, putative (TIGR) compare
DVU0307 +0.9 5.4 flagella basal body rod domain protein (TIGR) compare
DVU1444 flgD +0.8 4.5 basal-body rod modification protein FlgD (TIGR) compare
DORF8192 +0.8 1.1 SEED: FIG00606834: hypothetical protein compare
DORF12455 +0.8 1.2 SEED: helix-turn-helix protein, CopG family compare
DVU3225 +0.8 2.2 hypothetical protein (TIGR) compare
DVU0295 +0.8 5.7 amine oxidase, flavin-containing (TIGR) compare
DVU2774 +0.8 2.5 CBS domain protein/ACT domain protein (TIGR) compare
DVU1944 oorD +0.7 0.9 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU0409 +0.7 1.6 hypothetical protein (TIGR) compare
DORF10920 +0.7 2.7 no description compare
DVU3314 +0.7 2.0 peptidase, U32 family (TIGR) compare
DORF43335 +0.7 0.9 no description compare
DVU0629 +0.7 2.8 transcriptional regulator, TetR family (TIGR) compare
DVU2444 flaB3 +0.7 2.9 flagellin (TIGR) compare
DVU3085 +0.7 0.8 hypothetical protein (TIGR) compare
DVU1446 +0.7 4.0 heptosyltransferase family protein (TIGR) compare
DVU1735 +0.7 3.0 hypothetical protein (TIGR) compare
DVUA0146 +0.7 3.1 hypothetical protein (TIGR) compare
DVU0698 rfbC +0.7 3.8 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU3024 +0.7 0.6 hypothetical protein (TIGR) compare
DVU0862 +0.7 2.5 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU1030 +0.7 1.3 universal stress protein family (TIGR) compare
DVU2203 +0.6 1.1 endoribonuclease, L-PSP family (TIGR) compare
DVU2566 lysA-2 +0.6 1.8 diaminopimelate decarboxylase (TIGR) compare
DVU0518 +0.6 2.7 hypothetical protein (TIGR) compare
DVU0829 ptsI +0.6 2.3 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU3260 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1449 +0.6 2.7 anti-anti-sigma factor, putative (TIGR) compare
DVU1704 +0.6 0.7 conserved hypothetical protein (TIGR) compare
DVU2865 +0.6 0.6 lipoprotein, putative (TIGR) compare
DVU3027 glcD +0.6 2.2 glycolate oxidase, subunit GlcD (TIGR) compare
DVU2669 +0.6 1.4 conserved domain protein (TIGR) compare
DVU2631 +0.6 1.3 hypothetical protein (TIGR) compare
DVU0859 +0.6 2.9 hypothetical protein (TIGR) compare
DVU0298 +0.6 2.1 hypothetical protein (TIGR) compare
DVU2211 +0.6 4.2 hypothetical protein (TIGR) compare
DVU0300 +0.6 0.5 radical SAM domain protein (TIGR) compare
DVU0987 +0.6 1.1 heavy metal-binding domain protein (TIGR) compare
DVU2150 dksA +0.6 0.7 dnaK suppressor protein, putative (TIGR) compare
DVU2300 +0.6 0.8 hypothetical protein (TIGR) compare
DVU1337 lon +0.6 3.7 ATP-dependent protease La (TIGR) compare
DVU2220 +0.6 1.2 conserved hypothetical protein (TIGR) compare
DVU1632 +0.6 2.1 PTS system, IIA component (TIGR) compare
DVU3289 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1080 +0.6 1.8 iron-sulfur cluster-binding protein (TIGR) compare
DVU3020 +0.6 1.8 hypothetical protein (TIGR) compare
DVU3277 +0.6 0.5 hypothetical protein (TIGR) compare
DVU2847 +0.6 2.1 hypothetical protein (TIGR) compare
DVU2532 +0.6 2.1 transcriptional regulator, MerR family (TIGR) compare
DVU1838 trxB-2 +0.6 1.9 thioredoxin reductase (TIGR) compare
DVU0368 +0.5 1.1 hypothetical protein (TIGR) compare
DVU1359 +0.5 3.0 hypothetical protein (TIGR) compare
DVU2831 +0.5 1.4 hypothetical protein (TIGR) compare
DVU0970 +0.5 1.9 lipoprotein, putative (TIGR) compare
DVU1443 flgE +0.5 2.7 flagellar hook protein FlgE (TIGR) compare
DVU3318 +0.5 1.4 hypothetical protein (TIGR) compare
DVU1068 +0.5 1.9 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1652 hit +0.5 2.3 HIT family protein (TIGR) compare
DVU0499 +0.5 1.6 conserved hypothetical protein TIGR00149 (TIGR) compare
DVU2293 cooF +0.5 0.6 iron-sulfur protein CooF (TIGR) compare
DVU2454 +0.5 0.3 hypothetical protein (TIGR) compare
DVU2583 +0.5 2.3 lipoprotein, putative (TIGR) compare
DVU3223 aspB +0.5 2.3 aspartate aminotransferase (TIGR) compare
DVU0880 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0146 +0.5 2.2 hypothetical protein (TIGR) compare
DVU1828 gidA +0.5 1.3 glucose inhibited division protein A (TIGR) compare
DVU2408 +0.5 1.6 hypothetical protein (TIGR) compare
DVU2323 +0.5 1.4 hypothetical protein (TIGR) compare
DVU0196 +0.5 0.6 hypothetical protein (TIGR) compare
DVU1521 +0.5 0.3 hypothetical protein (TIGR) compare
DVU0522 yviF +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU2946 +0.5 1.5 hypothetical protein (TIGR) compare
DVU0524 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0898 +0.5 3.0 conserved hypothetical protein (TIGR) compare
DVU0637 +0.5 3.0 conserved hypothetical protein (TIGR) compare
DVU1653 +0.5 1.5 polyA polymerase family protein (TIGR) compare
DVU2638 +0.5 2.2 conserved domain protein (TIGR) compare
DVU0359 +0.5 2.4 HesB-like domain (TIGR) compare
DVU3134 glpK +0.5 1.9 glycerol kinase (TIGR) compare
DVU2889 +0.5 1.3 BioY family protein (TIGR) compare
DVU2169 +0.5 1.4 conserved hypothetical protein (TIGR) compare
DVU2391 +0.5 0.3 hypothetical protein (TIGR) compare
DVU2021 +0.5 1.2 hypothetical protein (TIGR) compare
DVU1407 +0.5 1.7 radical SAM domain protein (TIGR) compare
DVU0965 +0.5 0.5 hypothetical protein (TIGR) compare
DVU1538 +0.5 1.7 hypothetical protein (TIGR) compare
DVU2418 +0.5 2.2 vanZ-like family protein (TIGR) compare
DVU0684 hflK +0.5 1.8 hflK protein, putative (TIGR) compare
DVU1129 +0.5 1.3 conserved hypothetical protein (TIGR) compare
DVU2578 +0.5 2.4 response regulator (TIGR) compare
DORF35977 +0.4 2.9 no description compare
DVU2999 +0.4 1.3 methionyl-tRNA formyltransferase, putative (TIGR) compare
DVU2117 +0.4 1.4 membrane protein, putative (TIGR) compare
DVUA0104.1 +0.4 1.7 no description compare
DVU0798 +0.4 0.6 hypothetical protein (TIGR) compare
DVUA0084 +0.4 0.6 transcriptional regulator, AbrB family (TIGR) compare
DVU2846 +0.4 1.0 hypothetical protein (TIGR) compare
DVU0648 fepC +0.4 2.0 iron compound ABC transporter, ATP-binding protein (TIGR) compare
DVU0692 +0.4 1.7 molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR) compare
DVU1221 +0.4 1.1 hypothetical protein (TIGR) compare
DVU3133 glpF +0.4 1.0 glycerol uptake facilitator protein (TIGR) compare
DVU1464 +0.4 3.2 heptosyltransferase family protein (TIGR) compare
DVU1567 +0.4 1.7 hypothetical protein (TIGR) compare
DVU1934 phnE +0.4 1.6 phosphonate ABC transporter, permease protein (TIGR) compare
DVU1078 +0.4 2.6 R3H domain protein (TIGR) compare
DVU2606 +0.4 0.8 hypothetical protein (TIGR) compare
DVU0683 +0.4 2.3 hflC protein, putative (TIGR) compare
DVU1175 +0.4 0.7 hypothetical protein (TIGR) compare
DVU0486 +0.4 0.9 hypothetical protein (TIGR) compare
DORF768 +0.4 1.0 no description compare
DVU2310 +0.4 1.9 metallo-beta-lactamase family protein (TIGR) compare
DVU1036 +0.4 2.1 membrane protein, putative (TIGR) compare
DVU0980 b1199 +0.4 2.1 DAK2 domain protein (TIGR) compare
DVU0909 +0.4 2.0 hypothetical protein (TIGR) compare
DVU2341 +0.4 1.5 amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU3360 parB +0.4 2.2 ParB family protein (TIGR) compare
DVU0938 +0.4 1.2 isoamylase N-terminal domain protein (TIGR) compare
DVUA0074 +0.4 1.4 sulfotransferase family protein (TIGR) compare
DVU3177 +0.4 2.2 hypothetical protein (TIGR) compare
DVU0097 potB +0.4 1.1 polyamine ABC transporter, permease protein (TIGR) compare
DVU2331 +0.4 1.3 Smr family protein (TIGR) compare
DVU2848 +0.4 1.7 tail fiber assembly protein, putative (TIGR) compare
DVU2177 +0.4 0.3 hypothetical protein (TIGR) compare
DVU0784 +0.4 0.9 conserved hypothetical protein (TIGR) compare
DVU2657 +0.4 0.7 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR) compare
DVU2251 +0.4 1.0 DNA-binding protein (TIGR) compare
DVU1676 secG +0.4 1.4 preprotein translocase, SecG subunit (TIGR) compare
DVU1526 +0.4 1.0 hypothetical protein (TIGR) compare
DVU3089 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2629 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2250 +0.4 1.3 AMP-binding protein (TIGR) compare
DVU0842 +0.4 0.6 hypothetical protein (TIGR) compare
DVU0831 +0.4 1.4 PTS system, IID component, putative (TIGR) compare
DORF18707 +0.4 0.3 no description compare
DVU2577 +0.4 2.0 DNA-binding response regulator, LuxR family (TIGR) compare
DVU2229 motA-2 +0.4 2.0 chemotaxis protein MotA (TIGR) compare
DVU3028 +0.4 1.9 iron-sulfur cluster-binding protein (TIGR) compare
DVUA0053 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU1237 glnP +0.4 0.9 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU2423 +0.4 1.7 transcriptional regulator, putative (TIGR) compare
DVU3149 sppA +0.4 1.3 signal peptide peptidase SppA, 36K type (TIGR) compare
DVU1796 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1363 rfbD +0.4 2.0 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU2122 cpaF +0.4 2.1 type II/IV secretion system protein (TIGR) compare
DVU2060 +0.4 0.8 hypothetical protein (TIGR) compare


Specific Phenotypes

For 2 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms