Experiment set8IT013 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Pyruvate (fermenting) with Na2S as sulfur source

200 most detrimental genes:

  gene name fitness t score description  
DVU1631 +3.4 15.3 conserved hypothetical protein (TIGR) compare
DVU2747 +3.2 23.5 hypothetical protein (TIGR) compare
DVU2045 +2.4 14.9 hypothetical protein (TIGR) compare
DVU2894 flrA +2.2 14.8 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0311 +2.0 10.4 flagellar assembly protein FliH, putative (TIGR) compare
DVU1863 +1.9 7.9 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0044 fliP +1.9 13.0 flagellar biosynthetic protein fliP (TIGR) compare
DVU0315 flgC +1.8 13.1 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0043 fliQ +1.8 14.6 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0310 fliI +1.7 11.2 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0313 fliF +1.7 10.3 flagellar M-ring protein FliF (TIGR) compare
DVU3232 flhA +1.7 12.3 flagellar biosynthetic protein FlhA (TIGR) compare
DVU3233 flhB +1.7 11.1 flagellar biosynthetic protein FlhB (TIGR) compare
DVU1862 +1.6 7.4 GGDEF domain protein (TIGR) compare
DVU0312 fliG +1.6 7.5 flagellar motor switch protein FliG (TIGR) compare
DVU0910 fliM +1.6 11.6 flagellar motor switch protein FliM (TIGR) compare
DVU0314 fliE +1.5 5.6 flagellar basal body component FliE (TIGR) compare
DVU0045 +1.5 4.2 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0046 fliN +1.5 7.7 flagellar motor switch protein FliN (TIGR) compare
DVU0514 +1.5 10.4 FlgA family protein (TIGR) compare
DVU0047 +1.5 5.8 flagellar protein FliL (TIGR) compare
DVU0513 flgG +1.5 11.8 flagellar basal-body rod protein FlgG (TIGR) compare
DVU0793 +1.5 5.9 hypothetical protein (TIGR) compare
DVU3234 +1.5 4.9 flagellar biosynthetic protein FliR (TIGR) compare
DVU0316 flgB +1.5 7.5 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0516 flgI +1.4 9.2 flagellar P-ring protein FlgI (TIGR) compare
DVU2867 +1.4 2.1 holin (TIGR) compare
DVU0512 flgF +1.4 7.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU0515 flgH +1.3 7.7 flagellar L-ring protein FlgH (TIGR) compare
DORF8192 +1.3 1.7 SEED: FIG00606834: hypothetical protein compare
DVU3387 +1.3 7.9 hypothetical protein (TIGR) compare
DVU3229 fliA +1.3 7.5 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU2896 +1.3 9.8 TPR domain protein (TIGR) compare
DVU3227 +1.3 7.3 flagellar basal body-associated protein, putative (TIGR) compare
DVU0913 +1.2 3.4 conserved hypothetical protein (TIGR) compare
DVU0519 +1.2 8.9 flagellar hook-associated protein FlgK, putative (TIGR) compare
DORF18707 +1.2 1.1 no description compare
DVU0863 +1.2 8.1 flagellar hook-associated protein 2, putative (TIGR) compare
DVU2198 +1.2 1.1 hypothetical protein (TIGR) compare
DVU2284 +1.1 8.8 hypothetical protein (TIGR) compare
DVU1063 flrC +1.1 6.6 transcriptional regulatory protein (TIGR) compare
DVU1875 +1.1 1.6 dafA protein (TIGR) compare
DVU0339 serA +1.1 5.5 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU2609 +1.1 6.2 chemotaxis MotB protein, putative (TIGR) compare
DVU3329 +1.1 2.0 hypothetical protein (TIGR) compare
DVU0410 +1.1 4.7 hypothetical protein (TIGR) compare
DVU1465 +1.1 6.4 CgeB family protein (TIGR) compare
DVU0858 +1.0 6.5 lipoprotein, putative (TIGR) compare
DVU2608 motA-3 +1.0 5.7 chemotaxis protein MotA (TIGR) compare
DVU1444 flgD +1.0 4.8 basal-body rod modification protein FlgD (TIGR) compare
DVU0520 +1.0 6.5 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU1726 +0.9 1.5 hypothetical protein (TIGR) compare
DVU1445 +0.9 5.9 flagellar hook-length control domain protein (TIGR) compare
DVU0307 +0.9 5.7 flagella basal body rod domain protein (TIGR) compare
DVU2444 flaB3 +0.9 6.2 flagellin (TIGR) compare
DVU1251 +0.9 0.8 hypothetical protein (TIGR) compare
DVU2112 +0.8 2.3 hypothetical protein (TIGR) compare
DORF12455 +0.8 1.1 SEED: helix-turn-helix protein, CopG family compare
DVU0295 +0.8 6.3 amine oxidase, flavin-containing (TIGR) compare
DVU2606 +0.8 2.1 hypothetical protein (TIGR) compare
DVU0522 yviF +0.8 1.9 conserved hypothetical protein (TIGR) compare
DVU1521 +0.8 0.5 hypothetical protein (TIGR) compare
DVU0912 +0.8 2.2 conserved domain protein (TIGR) compare
DVU3260 +0.8 1.1 hypothetical protein (TIGR) compare
DVU1407 +0.8 2.9 radical SAM domain protein (TIGR) compare
DVU1944 oorD +0.8 1.1 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU0008 +0.8 0.6 hypothetical protein (TIGR) compare
DVU0862 +0.8 3.3 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU0842 +0.8 2.8 hypothetical protein (TIGR) compare
DVU1443 flgE +0.8 4.1 flagellar hook protein FlgE (TIGR) compare
DVU2669 +0.7 1.8 conserved domain protein (TIGR) compare
DVU0518 +0.7 2.8 hypothetical protein (TIGR) compare
DVU0963 +0.7 2.8 GTP cyclohydrolase I family protein (TIGR) compare
DVU3139 +0.7 1.6 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU1838 trxB-2 +0.7 1.8 thioredoxin reductase (TIGR) compare
DVU0259 divK +0.7 1.6 DNA-binding response regulator (TIGR) compare
DVU1337 lon +0.7 5.2 ATP-dependent protease La (TIGR) compare
DVU2774 +0.7 1.8 CBS domain protein/ACT domain protein (TIGR) compare
DVU1237 glnP +0.7 2.3 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVUA0070 +0.7 1.4 conserved domain protein (TIGR) compare
DVU2055 metG +0.7 0.8 methionyl-tRNA synthetase (TIGR) compare
DVU1676 secG +0.7 1.8 preprotein translocase, SecG subunit (TIGR) compare
DVU2016 +0.7 2.1 GGDEF domain protein (TIGR) compare
DVU0989 +0.7 1.8 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU2236 +0.7 0.6 hypothetical protein (TIGR) compare
DVU2211 +0.7 4.7 hypothetical protein (TIGR) compare
DVU1520 +0.7 0.7 hypothetical protein (TIGR) compare
DVU0298 +0.6 1.9 hypothetical protein (TIGR) compare
DVU_tRNA-Thr-1 tRNA-Thr +0.6 0.5 tRNA with anticodon GGT for Thr (VIMSS-AUTO) compare
DVU2847 +0.6 2.5 hypothetical protein (TIGR) compare
DVU3223 aspB +0.6 2.6 aspartate aminotransferase (TIGR) compare
DVU3020 +0.6 1.7 hypothetical protein (TIGR) compare
DVU3314 +0.6 1.5 peptidase, U32 family (TIGR) compare
DVU2377 +0.6 1.2 hypothetical protein (TIGR) compare
DVU0829 ptsI +0.6 2.3 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU1359 +0.6 3.1 hypothetical protein (TIGR) compare
DVU1744 +0.6 2.0 DNA-binding protein (TIGR) compare
DVU3318 +0.6 1.7 hypothetical protein (TIGR) compare
DVU3225 +0.6 1.6 hypothetical protein (TIGR) compare
DVU1449 +0.6 1.7 anti-anti-sigma factor, putative (TIGR) compare
DVU0661 +0.6 2.9 dihydrouridine synthase family protein (TIGR) compare
DVU0097 potB +0.6 1.8 polyamine ABC transporter, permease protein (TIGR) compare
DVU1629 yfiA +0.6 2.6 ribosomal subunit interface protein (TIGR) compare
DVU0493 +0.6 1.8 hypothetical protein (TIGR) compare
DVU0135 +0.6 2.8 conserved hypothetical protein (TIGR) compare
DVU1828 gidA +0.6 1.7 glucose inhibited division protein A (TIGR) compare
DVU0629 +0.6 2.0 transcriptional regulator, TetR family (TIGR) compare
DVU1493 +0.6 1.6 hypothetical protein (TIGR) compare
DVU1222 +0.5 2.4 hypothetical protein (TIGR) compare
DVU3360 parB +0.5 3.4 ParB family protein (TIGR) compare
DVU0859 +0.5 2.5 hypothetical protein (TIGR) compare
DVU1682 +0.5 1.7 GAF domain protein (TIGR) compare
DVU1446 +0.5 3.3 heptosyltransferase family protein (TIGR) compare
DVU0432 +0.5 2.0 Ech hydrogenase, subunit EchC, putative (TIGR) compare
DVU2578 +0.5 3.4 response regulator (TIGR) compare
DVU0898 +0.5 2.9 conserved hypothetical protein (TIGR) compare
DVU2592 +0.5 2.0 hypothetical protein (TIGR) compare
DVU2650 +0.5 1.2 hypothetical protein (TIGR) compare
DVU0987 +0.5 1.3 heavy metal-binding domain protein (TIGR) compare
DVU0715 livG +0.5 1.5 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU3177 +0.5 2.0 hypothetical protein (TIGR) compare
DVU0368 +0.5 1.4 hypothetical protein (TIGR) compare
DVU1225 +0.5 0.9 hypothetical protein (TIGR) compare
DVU0698 rfbC +0.5 2.0 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU1133 +0.5 1.2 hypothetical protein (TIGR) compare
DVU1666 efp +0.5 2.0 translation elongation factor P (TIGR) compare
DVU0452 +0.5 2.9 hypothetical protein (TIGR) compare
DVU2454 +0.5 0.3 hypothetical protein (TIGR) compare
DORF2315 +0.5 1.7 no description compare
DVU1632 +0.5 1.3 PTS system, IIA component (TIGR) compare
DVU2331 +0.5 2.2 Smr family protein (TIGR) compare
DVU2203 +0.5 0.7 endoribonuclease, L-PSP family (TIGR) compare
DVU1735 +0.5 1.3 hypothetical protein (TIGR) compare
DVU2400 +0.5 1.1 hydrogenase, putative (TIGR) compare
DVU3134 glpK +0.5 2.5 glycerol kinase (TIGR) compare
DVU1536 mltC +0.4 1.9 transglycosylase, SLT family (TIGR) compare
DVU1129 +0.4 1.6 conserved hypothetical protein (TIGR) compare
DVU3149 sppA +0.4 1.6 signal peptide peptidase SppA, 36K type (TIGR) compare
DVU2341 +0.4 1.8 amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU1971 +0.4 1.3 conserved domain protein (TIGR) compare
DVU1695 +0.4 1.4 tail fiber assembly protein, putative (TIGR) compare
DVU2881 +0.4 2.2 phage/plasmid primase, P4 family (TIGR) compare
DVU1447 +0.4 2.4 CgeB family protein (TIGR) compare
DVU3022 +0.4 0.2 sensory box histidine kinase/response regulator (TIGR) compare
DVU1338 +0.4 2.5 conserved hypothetical protein (TIGR) compare
DVU0399 +0.4 2.3 hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.4 1.8 flagellin (TIGR) compare
DVU2638 +0.4 1.6 conserved domain protein (TIGR) compare
DORF765 +0.4 1.3 SEED: Rhodanese-like protein ChrE compare
DVU0517 +0.4 2.0 peptidase, M23/M37 family (TIGR) compare
DVU2607 +0.4 2.0 hypothetical protein (TIGR) compare
DVU2907 umuD +0.4 1.9 umuD protein (TIGR) compare
DVU1589 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2915 +0.4 1.4 hypothetical protein (TIGR) compare
DVU0970 +0.4 1.1 lipoprotein, putative (TIGR) compare
DVU1071 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2343 glnQ +0.4 2.0 amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2117 +0.4 1.1 membrane protein, putative (TIGR) compare
DVU2946 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2021 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1934 phnE +0.4 1.5 phosphonate ABC transporter, permease protein (TIGR) compare
DVU3364 +0.4 1.7 conserved hypothetical protein (TIGR) compare
DVU2963 +0.4 1.2 response regulator (TIGR) compare
DVU0880 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2200 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0411 +0.4 2.5 heptosyltransferase family protein (TIGR) compare
DVU2875 +0.4 1.0 DNA-binding domain, excisionase family (TIGR) compare
DVU1283 galU +0.4 2.0 UTP-glucose-1-phosphate uridylyltransferase (TIGR) compare
DVU0833 +0.4 1.9 conserved hypothetical protein TIGR00252 (TIGR) compare
DVU0864 +0.4 1.4 glycoprotease family protein, putative (TIGR) compare
DVU1145 +0.4 0.7 hypothetical protein (TIGR) compare
DVU1526 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1658 +0.4 1.3 transaldolase, putative (TIGR) compare
DVU2815 +0.4 2.0 outer membrane efflux protein (TIGR) compare
DVU0976 +0.4 2.5 response regulator (TIGR) compare
DVU3287 +0.4 2.8 glycosyl transferase, group 2 family protein (TIGR) compare
DVU0533 hmcD +0.4 0.5 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU0359 +0.4 1.6 HesB-like domain (TIGR) compare
DVU1372 +0.4 1.5 membrane protein, putative (TIGR) compare
DVU2169 +0.4 1.3 conserved hypothetical protein (TIGR) compare
DVU2038 +0.4 1.4 hypothetical protein (TIGR) compare
DVU2340 +0.4 1.2 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU1035 glk +0.4 1.8 glucokinase, putative (TIGR) compare
DVU2695 +0.4 1.0 conserved hypothetical protein (TIGR) compare
DVU0628 buk +0.4 1.7 butyrate kinase (TIGR) compare
DVU1855 +0.4 1.9 integrase, truncation (TIGR) compare
DVU0524 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1464 +0.4 2.5 heptosyltransferase family protein (TIGR) compare
DVU2401 +0.4 2.0 hydrogenase, iron-sulfur cluster-binding subunit, putative (TIGR) compare
DVU2567 lysX +0.4 0.8 predicted transcriptional regulator for lysine biosynthesis and transport (Dmitry Rodionov) compare
DVU2855 +0.4 1.0 tail/DNA circulation protein, putative (TIGR) compare
DVU1791 +0.4 1.0 GatB/Yqey family protein (TIGR) compare
DVU1491 +0.3 0.8 conserved hypothetical protein (TIGR) compare
DVU0146 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1964 +0.3 1.2 transcriptional regulator, rrf2 protein, putative (TIGR) compare
DORF35977 +0.3 2.1 no description compare
DVU1045 +0.3 1.7 hypothetical protein (TIGR) compare
DVU0911 truA +0.3 1.5 tRNA pseudouridine synthase A (TIGR) compare
DVU0079 gufA +0.3 1.9 ZIP zinc transporter family protein (TIGR) compare
DVU2752 +0.3 1.6 rhodanese-like domain protein (TIGR) compare


Specific Phenotypes

For 2 genes in this experiment

For fermentative growth Sodium pyruvate in Desulfovibrio vulgaris Hildenborough JW710

For fermentative growth Sodium pyruvate across organisms