Experiment set8IT012 for Klebsiella michiganensis M5al

Compare to:

Dilute LB (1/10)

200 most important genes:

  gene name fitness t score description  
BWI76_RS05120 -6.7 -12.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09645 -6.7 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS01325 -6.4 -4.2 twin-arginine translocase subunit TatB compare
BWI76_RS01210 -6.4 -4.3 tyrosine recombinase XerC compare
BWI76_RS26455 -6.3 -3.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS13920 -5.8 -9.8 magnesium-translocating P-type ATPase compare
BWI76_RS04510 -5.6 -3.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS15115 -4.9 -3.4 MFS transporter compare
BWI76_RS05200 -4.4 -3.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS00400 -4.2 -2.9 glutamine synthetase compare
BWI76_RS23265 -4.1 -3.8 hypothetical protein compare
BWI76_RS00180 -3.9 -2.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04715 -3.8 -2.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS11155 -3.8 -3.5 penicillin-binding protein activator LpoB compare
BWI76_RS04705 -3.4 -6.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS17975 -3.2 -4.1 tail-specific protease compare
BWI76_RS23240 -3.2 -3.1 exonuclease V subunit gamma compare
BWI76_RS24900 -3.2 -3.1 DeoR family transcriptional regulator compare
BWI76_RS09970 -3.1 -3.0 porin OmpA compare
BWI76_RS01350 -3.0 -1.7 NAD(P)H-flavin reductase compare
BWI76_RS01870 -3.0 -4.0 diacylglycerol kinase compare
BWI76_RS01330 -2.9 -3.5 twin-arginine translocase subunit TatC compare
BWI76_RS26460 -2.9 -5.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS13915 -2.8 -6.5 magnesium transport protein MgtC compare
BWI76_RS23230 -2.8 -2.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS14435 -2.7 -2.5 glutamine ABC transporter ATP-binding protein compare
BWI76_RS01185 -2.7 -3.2 adenylate cyclase compare
BWI76_RS02530 -2.7 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS06525 -2.6 -5.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS25425 -2.6 -2.5 arginine repressor compare
BWI76_RS25060 -2.5 -4.1 lipoprotein NlpI compare
BWI76_RS00440 -2.4 -1.9 CopG family transcriptional regulator compare
BWI76_RS17720 -2.4 -1.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS20650 -2.3 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS15225 -2.3 -2.4 DeoR family transcriptional regulator compare
BWI76_RS22090 -2.2 -2.8 transcriptional regulator compare
BWI76_RS23480 -2.0 -9.4 EAL domain-containing protein compare
BWI76_RS15110 -1.9 -8.9 putative excinuclease ABC subunit A compare
BWI76_RS16965 -1.9 -3.5 murein lipoprotein compare
BWI76_RS04470 -1.8 -7.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS15955 -1.8 -6.7 transcriptional regulator compare
BWI76_RS18065 -1.8 -2.2 DNA polymerase III subunit theta compare
BWI76_RS02735 -1.8 -4.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26085 -1.7 -1.9 3-dehydroquinate synthase compare
BWI76_RS01200 -1.7 -1.6 diaminopimelate epimerase compare
BWI76_RS01775 -1.7 -1.3 hypothetical protein compare
BWI76_RS27390 -1.6 -3.4 ribonuclease PH compare
BWI76_RS06015 -1.6 -2.0 hypothetical protein compare
BWI76_RS11965 -1.6 -3.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS06465 -1.6 -2.1 IclR family transcriptional regulator compare
BWI76_RS21580 -1.6 -1.9 SsrA-binding protein compare
BWI76_RS10990 -1.6 -3.3 dihydroorotase compare
BWI76_RS09190 -1.5 -4.1 hypothetical protein compare
BWI76_RS25065 -1.5 -2.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS08525 -1.5 -1.6 colicin transporter compare
BWI76_RS27385 -1.5 -4.0 orotate phosphoribosyltransferase compare
BWI76_RS12235 -1.5 -2.5 hypothetical protein compare
BWI76_RS12090 -1.5 -2.4 HNH endonuclease compare
BWI76_RS06530 -1.5 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08405 -1.5 -2.2 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS20380 -1.5 -1.3 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS21370 -1.5 -2.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS20435 -1.5 -1.2 chorismate synthase compare
BWI76_RS27865 -1.5 -3.1 hypothetical protein compare
BWI76_RS18715 -1.4 -3.9 hypothetical protein compare
BWI76_RS22690 -1.4 -2.4 adenylyl-sulfate kinase compare
BWI76_RS26470 -1.4 -3.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS21075 -1.4 -1.7 membrane protein compare
BWI76_RS15850 -1.4 -0.9 DUF1317 domain-containing protein compare
BWI76_RS02815 -1.3 -2.4 fructose-bisphosphatase class I compare
BWI76_RS21450 -1.3 -1.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS02580 -1.3 -1.3 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS17980 -1.3 -2.4 RNA chaperone ProQ compare
BWI76_RS15830 -1.3 -2.1 hypothetical protein compare
BWI76_RS08765 -1.3 -1.7 8-amino-7-oxononanoate synthase compare
BWI76_RS11255 -1.3 -2.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS09910 -1.2 -8.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS12470 -1.2 -1.7 thiosulfate sulfurtransferase PspE compare
BWI76_RS26390 -1.2 -3.7 cell division protein FtsX compare
BWI76_RS06765 -1.2 -2.2 transcriptional regulator compare
BWI76_RS19100 -1.2 -3.0 putative acid phosphatase compare
BWI76_RS21090 -1.2 -1.6 cytoskeletal protein RodZ compare
BWI76_RS00345 -1.2 -2.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS15840 -1.2 -2.0 prophage protein compare
BWI76_RS22755 -1.2 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01080 -1.2 -5.4 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS06770 -1.2 -6.1 Hha toxicity attenuator compare
BWI76_RS01800 -1.2 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS13595 -1.2 -2.8 transcriptional regulator compare
BWI76_RS04465 -1.2 -3.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05015 -1.2 -2.4 transcriptional regulator compare
BWI76_RS27440 -1.2 -2.3 DNA helicase RecG compare
BWI76_RS18755 -1.1 -1.2 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS19845 -1.1 -4.4 phosphatase compare
BWI76_RS21350 -1.1 -2.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04305 -1.1 -1.0 molecular chaperone DnaJ compare
BWI76_RS26665 -1.1 -1.4 DNA-binding response regulator compare
BWI76_RS15680 -1.1 -3.4 hypothetical protein compare
BWI76_RS23810 -1.1 -2.6 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS18710 -1.1 -7.7 GGDEF-domain containing protein compare
BWI76_RS01085 -1.1 -3.4 polysaccharide chain length modulation protein compare
BWI76_RS20900 -1.1 -1.4 outer membrane protein assembly factor BamC compare
BWI76_RS15845 -1.1 -1.1 hypothetical protein compare
BWI76_RS21070 -1.1 -1.7 outer membrane protein assembly factor BamB compare
BWI76_RS01090 -1.1 -2.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS10705 -1.1 -3.2 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) compare
BWI76_RS08970 -1.0 -1.9 glutamine ABC transporter permease GlnP compare
BWI76_RS01115 -1.0 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS25920 -1.0 -2.0 peptidylprolyl isomerase compare
BWI76_RS21140 -1.0 -2.4 molecular chaperone HscA compare
BWI76_RS25245 -1.0 -2.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS11235 -1.0 -1.2 hypothetical protein compare
BWI76_RS08425 -1.0 -3.6 succinyl-CoA ligase subunit beta compare
BWI76_RS04050 -1.0 -2.0 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS08515 -1.0 -1.7 acyl-CoA thioesterase YbgC compare
BWI76_RS26075 -1.0 -1.6 DNA adenine methylase compare
BWI76_RS27430 -1.0 -0.9 (p)ppGpp synthetase compare
BWI76_RS04570 -1.0 -4.1 RNA polymerase-associated protein RapA compare
BWI76_RS22420 -0.9 -1.6 LacI family transcriptional regulator compare
BWI76_RS27505 -0.9 -2.2 septal ring assembly protein ZapB compare
BWI76_RS13895 -0.9 -2.6 LysR family transcriptional regulator compare
BWI76_RS25415 -0.9 -2.0 GntR family transcriptional regulator compare
BWI76_RS26425 -0.9 -4.8 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS25285 -0.9 -1.0 HPr family phosphocarrier protein compare
BWI76_RS04530 -0.9 -0.9 peptidylprolyl isomerase SurA compare
BWI76_RS15290 -0.9 -1.1 transcriptional regulator compare
BWI76_RS08985 -0.9 -1.6 threonine/homoserine exporter RhtA compare
BWI76_RS15215 -0.9 -1.0 N-acetyltransferase compare
BWI76_RS03190 -0.9 -1.9 hypothetical protein compare
BWI76_RS02995 -0.9 -4.2 aspartate carbamoyltransferase compare
BWI76_RS22125 -0.9 -1.3 membrane protein compare
BWI76_RS24025 -0.9 -3.6 agmatinase compare
BWI76_RS26200 -0.9 -4.8 starch synthase compare
BWI76_RS05450 -0.9 -1.1 ribonuclease HI compare
BWI76_RS08430 -0.9 -2.3 succinate--CoA ligase subunit alpha compare
BWI76_RS22640 -0.9 -1.2 hypothetical protein compare
BWI76_RS06680 -0.8 -0.7 hypothetical protein compare
BWI76_RS10870 -0.8 -1.8 nicotinamidase compare
BWI76_RS13095 -0.8 -1.6 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS23555 -0.8 -2.4 type 1 major fimbrial subunit precursor compare
BWI76_RS07845 -0.8 -2.0 LacI family transcriptional regulator compare
BWI76_RS27425 -0.8 -0.8 DNA-directed RNA polymerase subunit omega compare
BWI76_RS08530 -0.8 -1.9 protein TolA compare
BWI76_RS25335 -0.8 -2.2 stringent starvation protein A compare
BWI76_RS25870 -0.8 -1.2 elongation factor Tu compare
BWI76_RS11980 -0.8 -1.3 DeoR family transcriptional regulator compare
BWI76_RS12240 -0.8 -3.9 terminase small subunit compare
BWI76_RS22235 -0.8 -1.5 transcriptional regulator GutM compare
BWI76_RS13730 -0.8 -1.6 hypothetical protein compare
BWI76_RS27780 -0.8 -1.7 hypothetical protein compare
BWI76_RS24065 -0.8 -2.0 deoxyribonuclease I compare
BWI76_RS16335 -0.8 -1.3 division septum protein Blr compare
BWI76_RS06175 -0.8 -0.5 DUF188 domain-containing protein compare
BWI76_RS10890 -0.8 -1.0 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS23830 -0.8 -2.6 hypothetical protein compare
BWI76_RS19585 -0.7 -1.4 gentisate 1,2-dioxygenase compare
BWI76_RS13820 -0.7 -1.3 hypothetical protein compare
BWI76_RS00600 -0.7 -2.2 LacI family transcriptional regulator compare
BWI76_RS19515 -0.7 -1.5 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS09115 -0.7 -1.7 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS07325 -0.7 -1.9 aminoimidazole riboside kinase compare
BWI76_RS12420 -0.7 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS01205 -0.7 -1.3 DUF484 family protein compare
BWI76_RS16200 -0.7 -1.6 NAD(P) transhydrogenase subunit beta compare
BWI76_RS25215 -0.7 -2.3 phospholipid-binding protein MlaC compare
BWI76_RS18000 -0.7 -1.8 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS26670 -0.7 -3.9 two-component sensor histidine kinase compare
BWI76_RS27165 -0.7 -2.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS18930 -0.7 -1.9 histidinol-phosphate transaminase compare
BWI76_RS04250 -0.7 -2.4 homoserine kinase compare
BWI76_RS16275 -0.7 -1.6 fumarate hydratase FumA compare
BWI76_RS27170 -0.7 -2.5 MltR family transcriptional regulator compare
BWI76_RS21390 -0.7 -1.2 thiol disulfide reductase thioredoxin compare
BWI76_RS26590 -0.7 -1.4 transcriptional regulator compare
BWI76_RS14625 -0.7 -0.9 protein TolA compare
BWI76_RS11515 -0.7 -1.1 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS22650 -0.7 -3.5 lipoprotein NlpD compare
BWI76_RS22760 -0.7 -3.5 sulfite reductase subunit beta compare
BWI76_RS19375 -0.7 -1.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS16355 -0.7 -1.6 electron transport complex subunit A compare
BWI76_RS24720 -0.7 -0.9 hypothetical protein compare
BWI76_RS20160 -0.7 -1.4 NADH-quinone oxidoreductase subunit H compare
BWI76_RS08280 -0.7 -1.9 acyl-CoA esterase compare
BWI76_RS26775 -0.7 -2.0 endo-1,4-D-glucanase compare
BWI76_RS27200 -0.7 -1.9 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS01385 -0.7 -1.3 potassium transporter compare
BWI76_RS20350 -0.7 -2.6 amidophosphoribosyltransferase compare
BWI76_RS23915 -0.7 -1.4 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS27235 -0.7 -4.1 murein hydrolase activator EnvC compare
BWI76_RS15060 -0.7 -1.5 MarR family transcriptional regulator compare
BWI76_RS16790 -0.7 -3.4 MFS transporter compare
BWI76_RS16330 -0.7 -1.9 oxidoreductase compare
BWI76_RS12600 -0.7 -1.6 MFS transporter compare
BWI76_RS18165 -0.7 -1.0 NUDIX pyrophosphatase compare
BWI76_RS17805 -0.7 -0.8 membrane protein compare
BWI76_RS08210 -0.7 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS22765 -0.7 -3.6 sulfite reductase subunit alpha compare
BWI76_RS25960 -0.7 -2.4 NUDIX hydrolase compare
BWI76_RS10945 -0.7 -1.6 SecY/SecA suppressor protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in lb dilute experiments