Experiment set8IT006 for Xanthomonas campestris pv. campestris strain 8004

Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days

Group: in planta mesophyll
Media: + Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
Culturing: Xantho_ML2
By: Alice on 10/26/21

Specific Phenotypes

For 1 genes in this experiment

For in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days in Xanthomonas campestris pv. campestris strain 8004

For in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days across organisms

SEED Subsystems

Subsystem	#Specific
Inositol catabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
4-hydroxybenzoate biosynthesis II (bacteria)	1	1	1
polybrominated phenols biosynthesis	4	1	1
spongiadioxin C biosynthesis	7	2	1
polybrominated dihydroxylated diphenyl ethers biosynthesis	8	2	1
ubiquinol-8 biosynthesis (late decarboxylation)	9	8	1
p-HBAD biosynthesis	9	1	1
superpathway of ubiquinol-8 biosynthesis (early decarboxylation)	12	10	1
tetrahydromethanopterin biosynthesis	14	3	1
superpathway of polybrominated aromatic compound biosynthesis	20	2	1
phenolphthiocerol biosynthesis	23	1	1
superpathway of chorismate metabolism	59	41	1