Experiment set7S472 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS07505 -5.1 -0.9 DNA-directed RNA polymerase subunit K compare
MMJJ_RS06180 -4.3 -2.1 tryptophan--tRNA ligase compare
MMJJ_RS06905 -4.2 -1.4 hypothetical protein compare
MMJJ_RS05065 -4.0 -2.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS06875 -4.0 -1.5 hypothetical protein compare
MMJJ_RS07960 -3.9 -2.0 quinolinate synthase NadA compare
MMJJ_RS04970 -3.8 -1.8 DUF655 domain-containing protein compare
MMJJ_RS03095 -3.8 -1.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05765 -3.7 -0.9 flagellar protein E compare
MMJJ_RS05575 -3.7 -3.3 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS09375 -3.7 -1.1 hypothetical protein compare
MMJJ_RS05935 -3.7 -1.4 Era-like GTP-binding protein compare
MMJJ_RS09175 -3.6 -0.9 anthranilate synthase component I compare
MMJJ_RS00050 -3.4 -10.4 AAA family ATPase compare
MMJJ_RS05070 -3.4 -1.3 DNA primase catalytic subunit PriS compare
MMJJ_RS03200 -3.4 -1.3 uroporphyrinogen-III synthase compare
MMJJ_RS00055 -3.4 -7.8 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS04485 -3.4 -6.5 riboflavin synthase compare
MMJJ_RS00040 -3.3 -8.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS01830 -3.3 -2.3 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS00125 -3.3 -1.5 KEOPS complex subunit Cgi121 compare
MMJJ_RS03965 -3.3 -1.4 DNA-directed RNA polymerase subunit L compare
MMJJ_RS00370 -3.3 -1.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS05720 -3.3 -2.0 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS02040 -3.2 -1.7 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05995 -3.2 -1.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS00060 -3.2 -15.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS07035 -3.1 -1.7 glycosyl transferase compare
MMJJ_RS00570 -3.1 -1.3 ribonuclease P compare
MMJJ_RS00450 -3.1 -1.5 DUF126 domain-containing protein compare
MMJJ_RS08625 -3.1 -5.5 magnesium/cobalt transporter CorA compare
MMJJ_RS08660 -3.1 -2.5 acetylornithine transaminase compare
MMJJ_RS02045 -3.1 -2.0 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06695 -3.0 -1.9 amidohydrolase compare
MMJJ_RS00275 -3.0 -1.2 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS05415 -3.0 -1.1 hypothetical protein compare
MMJJ_RS04475 -3.0 -3.3 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS03875 -3.0 -2.6 CBS domain-containing protein compare
MMJJ_RS07950 -3.0 -1.9 4Fe-4S binding protein compare
MMJJ_RS07000 -3.0 -1.0 TrkH family potassium uptake protein compare
MMJJ_RS00035 -2.9 -14.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07190 -2.9 -3.5 RtcB family protein compare
MMJJ_RS07715 -2.9 -2.9 UbiD family decarboxylase compare
MMJJ_RS03660 -2.9 -1.5 DUF447 family protein compare
MMJJ_RS00075 -2.9 -9.8 AAA family ATPase compare
MMJJ_RS04200 -2.8 -3.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08320 -2.8 -1.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS00195 -2.8 -2.8 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS07970 -2.8 -1.6 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS00045 -2.8 -13.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS04655 -2.7 -6.2 FAD-dependent oxidoreductase compare
MMJJ_RS04700 -2.7 -5.1 deoxyhypusine synthase compare
MMJJ_RS06910 -2.7 -1.6 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06915 -2.7 -11.4 helix-turn-helix domain-containing protein compare
MMJJ_RS07245 -2.7 -4.1 amidohydrolase family protein compare
MMJJ_RS09035 -2.6 -4.4 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS08535 -2.6 -2.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS04180 -2.6 -2.2 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05590 -2.6 -1.6 homoserine dehydrogenase compare
MMJJ_RS04800 -2.6 -3.8 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS05535 -2.6 -9.6 hypothetical protein compare
MMJJ_RS05380 -2.6 -1.2 hypothetical protein compare
MMJJ_RS08020 -2.5 -6.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08490 -2.5 -3.1 rubrerythrin family protein compare
MMJJ_RS03840 -2.5 -2.2 DHH family phosphoesterase compare
MMJJ_RS06390 -2.5 -1.2 NADPH-dependent F420 reductase compare
MMJJ_RS08080 -2.4 -7.6 TIGR00300 family protein compare
MMJJ_RS00065 -2.4 -5.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00270 -2.4 -2.4 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS00080 -2.4 -12.1 DUF166 domain-containing protein compare
MMJJ_RS06930 -2.4 -1.8 type II methionyl aminopeptidase compare
MMJJ_RS03815 -2.4 -1.1 nascent polypeptide-associated complex protein compare
MMJJ_RS07590 -2.4 -10.0 flap endonuclease-1 compare
MMJJ_RS01880 -2.4 -1.9 RlmE family RNA methyltransferase compare
MMJJ_RS06485 -2.3 -1.8 phosphoglycerate kinase compare
MMJJ_RS06885 -2.3 -1.5 EhaF family protein compare
MMJJ_RS03190 -2.3 -2.1 phosphopyruvate hydratase compare
MMJJ_RS03310 -2.3 -2.7 hypothetical protein compare
MMJJ_RS03865 -2.3 -0.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS08010 -2.3 -5.8 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS03585 -2.3 -0.5 methanogenesis marker 6 protein compare
MMJJ_RS02200 -2.3 -6.6 chorismate pyruvate-lyase family protein compare
MMJJ_RS07350 -2.2 -2.4 4Fe-4S binding protein compare
MMJJ_RS07425 -2.2 -8.4 MBL fold metallo-hydrolase compare
MMJJ_RS00210 -2.2 -1.4 DUF530 family protein compare
MMJJ_RS07380 -2.2 -6.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS07370 -2.2 -3.7 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS00935 -2.2 -9.9 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS08620 -2.2 -3.3 DUF373 family protein compare
MMJJ_RS01600 -2.2 -1.0 radical SAM protein compare
MMJJ_RS08230 -2.2 -2.2 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS03785 -2.2 -1.6 hypothetical protein compare
MMJJ_RS05490 -2.1 -1.8 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS04685 -2.1 -6.0 carbamoyltransferase HypF compare
MMJJ_RS04985 -2.1 -2.3 glutamyl-tRNA reductase compare
MMJJ_RS05190 -2.1 -4.3 gamma carbonic anhydrase family protein compare
MMJJ_RS06260 -2.1 -4.7 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS03765 -2.1 -4.7 hypothetical protein compare
MMJJ_RS03125 -2.1 -2.3 GMC oxidoreductase compare
MMJJ_RS00215 -2.1 -1.5 CCA tRNA nucleotidyltransferase compare
MMJJ_RS05155 -2.0 -3.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS06375 -2.0 -2.3 UbiX family flavin prenyltransferase compare
MMJJ_RS02090 -2.0 -3.5 tyramine--L-glutamate ligase compare
MMJJ_RS06155 -2.0 -3.8 phosphatidylglycerophosphatase A compare
MMJJ_RS08500 -2.0 -4.9 L-sulfolactate dehydrogenase compare
MMJJ_RS04755 -2.0 -7.7 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS03810 -2.0 -1.8 AIR synthase-related protein compare
MMJJ_RS00475 -2.0 -1.3 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05195 -2.0 -3.8 hypothetical protein compare
MMJJ_RS00205 -2.0 -3.2 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS03760 -1.9 -1.0 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS01415 -1.9 -1.3 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS08335 -1.9 -1.4 ABC transporter ATP-binding protein compare
MMJJ_RS08840 -1.9 -2.8 calcium/sodium antiporter compare
MMJJ_RS00360 -1.9 -1.5 adenosylhomocysteinase compare
MMJJ_RS06625 -1.9 -0.9 pyruvate synthase subunit PorB compare
MMJJ_RS06255 -1.9 -5.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS08430 -1.9 -4.5 small nuclear ribonucleoprotein compare
MMJJ_RS05330 -1.9 -0.9 DNA polymerase II large subunit compare
MMJJ_RS00580 -1.9 -0.9 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07155 -1.9 -6.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS04760 -1.9 -10.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS05620 -1.9 -1.8 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS06175 -1.8 -1.5 DUF1743 domain-containing protein compare
MMJJ_RS01810 -1.8 -1.1 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS00070 -1.8 -2.2 CooT family nickel-binding protein compare
MMJJ_RS00345 -1.8 -6.8 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS03920 -1.8 -10.0 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS04730 -1.8 -1.6 tyrosine decarboxylase MfnA compare
MMJJ_RS04995 -1.8 -3.9 Tfx family DNA-binding protein compare
MMJJ_RS01690 -1.8 -1.5 methanogenesis marker 12 protein compare
MMJJ_RS06860 -1.8 -2.1 hypothetical protein compare
MMJJ_RS05650 -1.8 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS03140 -1.8 -6.7 tRNA-dihydrouridine synthase compare
MMJJ_RS01935 -1.8 -1.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS02855 -1.7 -6.4 DEAD/DEAH box helicase compare
MMJJ_RS07345 -1.7 -5.6 homocysteine biosynthesis protein compare
MMJJ_RS04750 -1.7 -5.3 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS04565 -1.7 -2.3 sirohydrochlorin nickelochelatase compare
MMJJ_RS05710 -1.7 -3.3 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07720 -1.7 -1.0 UPF0058 family protein compare
MMJJ_RS06270 -1.7 -5.1 dethiobiotin synthase compare
MMJJ_RS07470 -1.7 -1.0 50S ribosome-binding GTPase compare
MMJJ_RS01200 -1.7 -1.6 PRC-barrel domain-containing protein compare
MMJJ_RS06760 -1.6 -2.7 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS05655 -1.6 -4.2 HisA/HisF family protein compare
MMJJ_RS06490 -1.6 -0.7 methanogenesis marker 2 protein compare
MMJJ_RS05780 -1.6 -1.9 flagellin compare
MMJJ_RS07785 -1.6 -1.2 fumarate reductase subunit A compare
MMJJ_RS04150 -1.6 -1.6 DUF5379 domain-containing protein compare
MMJJ_RS06250 -1.6 -1.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS06635 -1.6 -8.6 4Fe-4S binding protein compare
MMJJ_RS00645 -1.6 -6.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS06110 -1.6 -1.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00285 -1.6 -7.8 UPF0254 family protein compare
MMJJ_RS01765 -1.6 -4.6 winged helix-turn-helix domain-containing protein compare
MMJJ_RS03930 -1.5 -7.0 hypothetical protein compare
MMJJ_RS06805 -1.5 -1.3 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS00480 -1.5 -8.4 flippase compare
MMJJ_RS06220 -1.5 -3.9 polyamine aminopropyltransferase compare
MMJJ_RS02920 -1.5 -1.0 30S ribosomal protein S27ae compare
MMJJ_RS06225 -1.5 -1.0 adenosylmethionine decarboxylase compare
MMJJ_RS00425 -1.5 -2.1 hypothetical protein compare
MMJJ_RS09030 -1.5 -8.1 hypothetical protein compare
MMJJ_RS00550 -1.5 -5.2 AIR synthase-related protein compare
MMJJ_RS09295 -1.5 -0.6 hypothetical protein compare
MMJJ_RS05260 -1.5 -2.9 ATP-grasp domain-containing protein compare
MMJJ_RS03615 -1.5 -1.4 cobalt-precorrin-8 methylmutase compare
MMJJ_RS07945 -1.5 -1.4 4Fe-4S binding protein compare
MMJJ_RS06835 -1.5 -7.2 4Fe-4S binding protein compare
MMJJ_RS01750 -1.5 -1.1 ferrous iron transport protein A compare
MMJJ_RS03490 -1.5 -1.3 ribonuclease VapC compare
MMJJ_RS04050 -1.5 -0.7 dihydroneopterin aldolase family protein compare
MMJJ_RS07975 -1.5 -5.0 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS06880 -1.5 -0.7 EhaG family protein compare
MMJJ_RS05610 -1.5 -2.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS04790 -1.5 -1.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04975 -1.5 -1.0 glycosyltransferase family 4 protein compare
MMJJ_RS08095 -1.4 -2.2 cobyric acid synthase CobQ compare
MMJJ_RS03670 -1.4 -1.8 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03110 -1.4 -1.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS07430 -1.4 -1.9 ribonuclease VapC compare
MMJJ_RS05170 -1.4 -6.2 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS06725 -1.4 -6.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS00785 -1.4 -1.5 hypothetical protein compare
MMJJ_RS08055 -1.4 -4.0 methanogenesis marker 14 protein compare
MMJJ_RS07275 -1.4 -1.4 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03270 -1.4 -0.9 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS07955 -1.4 -4.7 ThiF family adenylyltransferase compare
MMJJ_RS01865 -1.3 -1.9 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS03115 -1.3 -3.4 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS07160 -1.3 -9.0 M20 family metallo-hydrolase compare
MMJJ_RS08035 -1.3 -3.3 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS06750 -1.3 -0.9 homoaconitase large subunit compare
MMJJ_RS06840 -1.3 -1.5 nickel-dependent hydrogenase large subunit compare
MMJJ_RS08820 -1.3 -4.0 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS09085 -1.3 -6.2 minichromosome maintenance protein MCM compare
MMJJ_RS04155 -1.3 -3.1 hypothetical protein compare
MMJJ_RS06380 -1.3 -1.9 signal recognition particle protein Srp54 compare
MMJJ_RS01355 -1.3 -1.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments