Experiment set7S452 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Sodium sulfate 125 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS07505 -5.0 -0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS00050 -5.0 -6.1 AAA family ATPase compare
MMJJ_RS05590 -4.6 -1.0 homoserine dehydrogenase compare
MMJJ_RS06340 -4.6 -1.3 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS00035 -4.6 -17.1 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00045 -4.5 -12.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS09295 -4.4 -0.4 hypothetical protein compare
MMJJ_RS00040 -4.4 -6.1 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS08810 -4.3 -0.4 DUF4040 domain-containing protein compare
MMJJ_RS04970 -4.3 -0.9 DUF655 domain-containing protein compare
MMJJ_RS00080 -4.2 -11.9 DUF166 domain-containing protein compare
MMJJ_RS00055 -4.2 -6.5 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS00060 -4.1 -13.8 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00075 -4.1 -7.9 AAA family ATPase compare
MMJJ_RS05770 -4.0 -0.9 flagellar protein D compare
MMJJ_RS05575 -3.9 -1.3 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04760 -3.9 -14.9 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS00570 -3.8 -0.7 ribonuclease P compare
MMJJ_RS04485 -3.8 -4.8 riboflavin synthase compare
MMJJ_RS02045 -3.6 -0.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS08010 -3.6 -5.2 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS06180 -3.6 -1.0 tryptophan--tRNA ligase compare
MMJJ_RS05535 -3.6 -10.3 hypothetical protein compare
MMJJ_RS05765 -3.5 -0.5 flagellar protein E compare
MMJJ_RS00370 -3.5 -0.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06600 -3.5 -0.8 DUF555 domain-containing protein compare
MMJJ_RS07970 -3.5 -0.6 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS00935 -3.4 -8.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS08430 -3.4 -4.5 small nuclear ribonucleoprotein compare
MMJJ_RS03920 -3.4 -10.8 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS06875 -3.4 -0.8 hypothetical protein compare
MMJJ_RS04750 -3.4 -6.5 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS01405 -3.4 -0.5 proline--tRNA ligase compare
MMJJ_RS08935 -3.3 -0.5 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS03865 -3.3 -0.6 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS03875 -3.3 -1.0 CBS domain-containing protein compare
MMJJ_RS07955 -3.3 -7.4 ThiF family adenylyltransferase compare
MMJJ_RS03115 -3.3 -3.2 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS01830 -3.2 -1.0 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08020 -3.2 -7.0 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03965 -3.2 -0.6 DNA-directed RNA polymerase subunit L compare
MMJJ_RS04800 -3.2 -1.4 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08080 -3.2 -6.5 TIGR00300 family protein compare
MMJJ_RS03095 -3.2 -0.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS08535 -3.2 -1.8 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06860 -3.1 -0.9 hypothetical protein compare
MMJJ_RS06695 -3.1 -0.8 amidohydrolase compare
MMJJ_RS06915 -3.1 -11.2 helix-turn-helix domain-containing protein compare
MMJJ_RS02035 -3.1 -3.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS04755 -3.1 -8.6 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS00270 -3.1 -1.2 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS09375 -3.1 -0.5 hypothetical protein compare
MMJJ_RS00065 -3.1 -6.2 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS08625 -3.1 -2.9 magnesium/cobalt transporter CorA compare
MMJJ_RS05195 -3.1 -3.0 hypothetical protein compare
MMJJ_RS03225 -3.0 -1.3 4Fe-4S binding protein compare
MMJJ_RS00215 -3.0 -0.8 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03230 -3.0 -1.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08170 -2.9 -0.9 diaminopimelate decarboxylase compare
MMJJ_RS00580 -2.9 -0.5 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS03490 -2.9 -1.0 ribonuclease VapC compare
MMJJ_RS09085 -2.9 -11.1 minichromosome maintenance protein MCM compare
MMJJ_RS06225 -2.9 -0.7 adenosylmethionine decarboxylase compare
MMJJ_RS04975 -2.9 -0.9 glycosyltransferase family 4 protein compare
MMJJ_RS08585 -2.9 -5.6 M42 family metallopeptidase compare
MMJJ_RS04475 -2.9 -1.8 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS01355 -2.9 -0.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS05420 -2.9 -1.8 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS04050 -2.9 -0.5 dihydroneopterin aldolase family protein compare
MMJJ_RS08335 -2.9 -0.6 ABC transporter ATP-binding protein compare
MMJJ_RS05360 -2.8 -3.6 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS07245 -2.8 -1.6 amidohydrolase family protein compare
MMJJ_RS05720 -2.8 -1.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS00125 -2.8 -0.8 KEOPS complex subunit Cgi121 compare
MMJJ_RS08325 -2.8 -1.3 glycosyltransferase family 2 protein compare
MMJJ_RS06255 -2.8 -3.5 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS05135 -2.8 -0.6 50S ribosomal protein L18Ae compare
MMJJ_RS02040 -2.8 -0.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS08130 -2.8 -0.4 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS08320 -2.8 -0.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03200 -2.7 -0.6 uroporphyrinogen-III synthase compare
MMJJ_RS03270 -2.7 -1.0 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS06835 -2.7 -8.6 4Fe-4S binding protein compare
MMJJ_RS04730 -2.7 -0.7 tyrosine decarboxylase MfnA compare
MMJJ_RS05995 -2.7 -0.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS05070 -2.7 -0.6 DNA primase catalytic subunit PriS compare
MMJJ_RS06250 -2.7 -1.0 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS07975 -2.7 -5.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS00210 -2.7 -0.8 DUF530 family protein compare
MMJJ_RS04565 -2.7 -0.7 sirohydrochlorin nickelochelatase compare
MMJJ_RS07945 -2.7 -0.7 4Fe-4S binding protein compare
MMJJ_RS07035 -2.7 -0.9 glycosyl transferase compare
MMJJ_RS03190 -2.6 -0.8 phosphopyruvate hydratase compare
MMJJ_RS07410 -2.6 -1.2 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS09175 -2.6 -0.5 anthranilate synthase component I compare
MMJJ_RS03785 -2.6 -0.7 hypothetical protein compare
MMJJ_RS06175 -2.6 -0.6 DUF1743 domain-containing protein compare
MMJJ_RS07875 -2.6 -0.6 FAD-dependent oxidoreductase compare
MMJJ_RS00285 -2.6 -8.3 UPF0254 family protein compare
MMJJ_RS08490 -2.6 -1.7 rubrerythrin family protein compare
MMJJ_RS08620 -2.5 -1.9 DUF373 family protein compare
MMJJ_RS00205 -2.5 -2.2 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS07470 -2.5 -0.5 50S ribosome-binding GTPase compare
MMJJ_RS03240 -2.5 -1.2 histone family protein compare
MMJJ_RS00275 -2.5 -0.6 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS05190 -2.5 -3.3 gamma carbonic anhydrase family protein compare
MMJJ_RS06760 -2.5 -1.4 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS09035 -2.5 -3.1 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06660 -2.5 -5.3 DUF1188 domain-containing protein compare
MMJJ_RS01750 -2.5 -0.6 ferrous iron transport protein A compare
MMJJ_RS00345 -2.5 -5.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS07155 -2.4 -6.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS07190 -2.4 -1.9 RtcB family protein compare
MMJJ_RS03765 -2.4 -3.9 hypothetical protein compare
MMJJ_RS07950 -2.4 -0.9 4Fe-4S binding protein compare
MMJJ_RS02200 -2.4 -4.7 chorismate pyruvate-lyase family protein compare
MMJJ_RS04720 -2.4 -0.9 IMP dehydrogenase compare
MMJJ_RS07415 -2.4 -1.2 polyprenyl diphosphate synthase compare
MMJJ_RS03815 -2.4 -0.5 nascent polypeptide-associated complex protein compare
MMJJ_RS05155 -2.4 -2.2 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS04180 -2.4 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07430 -2.4 -1.4 ribonuclease VapC compare
MMJJ_RS06220 -2.4 -2.7 polyamine aminopropyltransferase compare
MMJJ_RS06755 -2.4 -8.7 diadenylate cyclase compare
MMJJ_RS00475 -2.4 -1.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS09405 -2.4 -2.5 hypothetical protein compare
MMJJ_RS04790 -2.4 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS08795 -2.3 -1.1 phosphoglucosamine mutase compare
MMJJ_RS02935 -2.3 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS04595 -2.3 -2.1 hypothetical protein compare
MMJJ_RS06110 -2.3 -0.6 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07000 -2.3 -0.5 TrkH family potassium uptake protein compare
MMJJ_RS05930 -2.3 -0.5 cell division protein SepF compare
MMJJ_RS02090 -2.3 -1.5 tyramine--L-glutamate ligase compare
MMJJ_RS01285 -2.3 -2.6 CopG family ribbon-helix-helix protein compare
MMJJ_RS06155 -2.3 -1.8 phosphatidylglycerophosphatase A compare
MMJJ_RS08825 -2.3 -3.9 hypothetical protein compare
MMJJ_RS05170 -2.2 -5.9 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS08095 -2.2 -1.4 cobyric acid synthase CobQ compare
MMJJ_RS01415 -2.2 -0.6 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS03895 -2.2 -0.8 hydrogenase expression/formation protein HypE compare
MMJJ_RS07585 -2.2 -6.1 DHH family phosphoesterase compare
MMJJ_RS06665 -2.2 -2.9 DUF3236 domain-containing protein compare
MMJJ_RS06935 -2.2 -5.1 GTP-binding protein compare
MMJJ_RS04655 -2.2 -3.9 FAD-dependent oxidoreductase compare
MMJJ_RS03655 -2.2 -2.4 replication factor C large subunit compare
MMJJ_RS01865 -2.2 -2.6 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS01200 -2.1 -0.7 PRC-barrel domain-containing protein compare
MMJJ_RS06725 -2.1 -7.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06240 -2.1 -0.5 dihydropteroate synthase-like protein compare
MMJJ_RS07345 -2.1 -3.7 homocysteine biosynthesis protein compare
MMJJ_RS03150 -2.1 -1.9 2-phospho-L-lactate transferase compare
MMJJ_RS05935 -2.1 -0.7 Era-like GTP-binding protein compare
MMJJ_RS06940 -2.1 -7.2 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07265 -2.0 -5.2 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS03615 -2.0 -0.8 cobalt-precorrin-8 methylmutase compare
MMJJ_RS04615 -2.0 -1.7 methanogenesis marker 3 protein compare
MMJJ_RS01765 -2.0 -4.6 winged helix-turn-helix domain-containing protein compare
MMJJ_RS04620 -2.0 -0.8 homocitrate synthase family protein compare
MMJJ_RS08820 -2.0 -2.7 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS05490 -2.0 -0.6 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS08500 -2.0 -3.4 L-sulfolactate dehydrogenase compare
MMJJ_RS04480 -2.0 -1.7 hypothetical protein compare
MMJJ_RS00600 -2.0 -0.9 hydroxymethylbilane synthase compare
MMJJ_RS04200 -2.0 -1.9 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS04520 -2.0 -1.4 coenzyme F430 synthase compare
MMJJ_RS01935 -2.0 -0.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS00355 -2.0 -1.3 ribonuclease P protein component 4 compare
MMJJ_RS05610 -2.0 -1.3 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07275 -1.9 -0.6 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS00550 -1.9 -4.9 AIR synthase-related protein compare
MMJJ_RS03810 -1.9 -1.0 AIR synthase-related protein compare
MMJJ_RS02855 -1.9 -3.5 DEAD/DEAH box helicase compare
MMJJ_RS01360 -1.9 -0.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00070 -1.9 -1.3 CooT family nickel-binding protein compare
MMJJ_RS08060 -1.9 -4.2 DNA repair and recombination protein RadA compare
MMJJ_RS06625 -1.9 -0.4 pyruvate synthase subunit PorB compare
MMJJ_RS03840 -1.9 -0.7 DHH family phosphoesterase compare
MMJJ_RS00450 -1.9 -0.7 DUF126 domain-containing protein compare
MMJJ_RS04150 -1.8 -1.0 DUF5379 domain-containing protein compare
MMJJ_RS03125 -1.8 -0.9 GMC oxidoreductase compare
MMJJ_RS03245 -1.8 -0.4 UMP kinase compare
MMJJ_RS06825 -1.8 -5.8 4Fe-4S binding protein compare
MMJJ_RS05415 -1.8 -0.6 hypothetical protein compare
MMJJ_RS07720 -1.8 -0.5 UPF0058 family protein compare
MMJJ_RS08330 -1.8 -0.5 SufD family Fe-S cluster assembly protein compare
MMJJ_RS03660 -1.8 -0.9 DUF447 family protein compare
MMJJ_RS07960 -1.8 -1.2 quinolinate synthase NadA compare
MMJJ_RS00195 -1.8 -1.3 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS06750 -1.8 -0.6 homoaconitase large subunit compare
MMJJ_RS02125 -1.8 -1.8 hypothetical protein compare
MMJJ_RS03995 -1.8 -3.6 PHP domain-containing protein compare
MMJJ_RS06635 -1.8 -7.6 4Fe-4S binding protein compare
MMJJ_RS06855 -1.8 -0.3 DUF2104 domain-containing protein compare
MMJJ_RS03060 -1.8 -0.8 methanogenesis marker 7 protein compare
MMJJ_RS03110 -1.7 -1.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06260 -1.7 -3.3 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS06010 -1.7 -2.1 hypothetical protein compare
MMJJ_RS05375 -1.7 -8.0 radical SAM protein compare
MMJJ_RS08400 -1.7 -2.0 CoB--CoM heterodisulfide reductase subunit C compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium sulfate in Methanococcus maripaludis JJ

For stress Sodium sulfate across organisms