Experiment set7S440 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Sodium selenate 31.25 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS05575 -4.9 -2.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS02040 -4.6 -1.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS06180 -4.6 -2.2 tryptophan--tRNA ligase compare
MMJJ_RS00570 -4.5 -1.3 ribonuclease P compare
MMJJ_RS04975 -4.4 -1.7 glycosyltransferase family 4 protein compare
MMJJ_RS00450 -4.3 -1.5 DUF126 domain-containing protein compare
MMJJ_RS06905 -4.3 -1.5 hypothetical protein compare
MMJJ_RS03225 -4.3 -1.8 4Fe-4S binding protein compare
MMJJ_RS03865 -4.2 -1.2 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06875 -4.2 -1.6 hypothetical protein compare
MMJJ_RS03230 -4.2 -2.2 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05720 -4.0 -1.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS06695 -4.0 -1.8 amidohydrolase compare
MMJJ_RS05995 -4.0 -1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS00355 -4.0 -1.8 ribonuclease P protein component 4 compare
MMJJ_RS06250 -3.9 -1.8 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08320 -3.9 -1.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03810 -3.8 -1.6 AIR synthase-related protein compare
MMJJ_RS09175 -3.7 -0.9 anthranilate synthase component I compare
MMJJ_RS01960 -3.7 -6.5 glycosyltransferase family 2 protein compare
MMJJ_RS07410 -3.6 -2.0 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06175 -3.6 -1.3 DUF1743 domain-containing protein compare
MMJJ_RS01405 -3.6 -0.8 proline--tRNA ligase compare
MMJJ_RS05070 -3.6 -1.4 DNA primase catalytic subunit PriS compare
MMJJ_RS03895 -3.4 -1.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS05445 -3.3 -1.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS00275 -3.3 -1.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS05930 -3.3 -1.3 cell division protein SepF compare
MMJJ_RS01750 -3.3 -1.4 ferrous iron transport protein A compare
MMJJ_RS00475 -3.3 -2.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS06910 -3.2 -1.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS07035 -3.2 -1.7 glycosyl transferase compare
MMJJ_RS05280 -3.1 -0.8 hypothetical protein compare
MMJJ_RS02200 -3.1 -7.4 chorismate pyruvate-lyase family protein compare
MMJJ_RS08065 -3.1 -2.0 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS07000 -3.1 -1.0 TrkH family potassium uptake protein compare
MMJJ_RS08155 -3.1 -2.6 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS05490 -3.0 -1.4 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS03615 -3.0 -1.9 cobalt-precorrin-8 methylmutase compare
MMJJ_RS01200 -3.0 -1.5 PRC-barrel domain-containing protein compare
MMJJ_RS06625 -2.9 -1.0 pyruvate synthase subunit PorB compare
MMJJ_RS04200 -2.9 -4.0 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03660 -2.8 -2.0 DUF447 family protein compare
MMJJ_RS00560 -2.8 -2.5 homoisocitrate dehydrogenase compare
MMJJ_RS01935 -2.8 -1.5 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04800 -2.8 -4.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS00270 -2.8 -2.5 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS07945 -2.8 -1.7 4Fe-4S binding protein compare
MMJJ_RS06200 -2.8 -1.9 phosphoglycerate dehydrogenase compare
MMJJ_RS08170 -2.8 -1.5 diaminopimelate decarboxylase compare
MMJJ_RS08660 -2.7 -2.7 acetylornithine transaminase compare
MMJJ_RS01690 -2.7 -1.4 methanogenesis marker 12 protein compare
MMJJ_RS08080 -2.7 -6.3 TIGR00300 family protein compare
MMJJ_RS02090 -2.7 -4.0 tyramine--L-glutamate ligase compare
MMJJ_RS01360 -2.7 -1.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS03820 -2.7 -1.6 hydrogenase formation protein HypD compare
MMJJ_RS04730 -2.7 -1.9 tyrosine decarboxylase MfnA compare
MMJJ_RS01355 -2.7 -2.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03965 -2.7 -1.6 DNA-directed RNA polymerase subunit L compare
MMJJ_RS05155 -2.7 -4.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS08020 -2.7 -6.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01070 -2.7 -2.1 PadR family transcriptional regulator compare
MMJJ_RS06485 -2.6 -2.0 phosphoglycerate kinase compare
MMJJ_RS03875 -2.6 -2.5 CBS domain-containing protein compare
MMJJ_RS08095 -2.5 -3.0 cobyric acid synthase CobQ compare
MMJJ_RS00600 -2.5 -1.9 hydroxymethylbilane synthase compare
MMJJ_RS06760 -2.5 -3.2 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS02045 -2.5 -1.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03840 -2.5 -2.7 DHH family phosphoesterase compare
MMJJ_RS03785 -2.5 -1.8 hypothetical protein compare
MMJJ_RS05540 -2.5 -13.1 LysR family transcriptional regulator compare
MMJJ_RS04980 -2.5 -3.2 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS01870 -2.4 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS07585 -2.4 -7.2 DHH family phosphoesterase compare
MMJJ_RS04875 -2.4 -0.8 tRNA-Lys compare
MMJJ_RS05610 -2.4 -3.2 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS06880 -2.3 -0.7 EhaG family protein compare
MMJJ_RS03095 -2.3 -1.9 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS06840 -2.3 -1.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07705 -2.3 -2.0 GTP-binding protein EngB compare
MMJJ_RS03190 -2.3 -1.9 phosphopyruvate hydratase compare
MMJJ_RS04615 -2.3 -3.4 methanogenesis marker 3 protein compare
MMJJ_RS08575 -2.2 -2.7 hypothetical protein compare
MMJJ_RS05360 -2.2 -4.5 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS04655 -2.2 -4.6 FAD-dependent oxidoreductase compare
MMJJ_RS04985 -2.2 -2.7 glutamyl-tRNA reductase compare
MMJJ_RS07950 -2.2 -1.9 4Fe-4S binding protein compare
MMJJ_RS04765 -2.2 -6.1 metal-dependent hydrolase compare
MMJJ_RS01600 -2.2 -1.4 radical SAM protein compare
MMJJ_RS01880 -2.2 -2.1 RlmE family RNA methyltransferase compare
MMJJ_RS03160 -2.2 -9.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS02920 -2.2 -1.0 30S ribosomal protein S27ae compare
MMJJ_RS06510 -2.1 -0.9 LL-diaminopimelate aminotransferase compare
MMJJ_RS00220 -2.1 -3.8 UPF0058 family protein compare
MMJJ_RS01755 -2.1 -0.9 ferrous iron transport protein B compare
MMJJ_RS09035 -2.1 -3.1 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS00580 -2.1 -0.9 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS01350 -2.0 -3.3 sodium:proton antiporter compare
MMJJ_RS00550 -2.0 -5.6 AIR synthase-related protein compare
MMJJ_RS08625 -2.0 -4.2 magnesium/cobalt transporter CorA compare
MMJJ_RS05225 -2.0 -0.8 Gar1/Naf1 family protein compare
MMJJ_RS00205 -2.0 -3.2 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS06380 -2.0 -2.8 signal recognition particle protein Srp54 compare
MMJJ_RS05950 -2.0 -1.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS08795 -2.0 -1.7 phosphoglucosamine mutase compare
MMJJ_RS07360 -2.0 -1.0 TIGR00269 family protein compare
MMJJ_RS00265 -2.0 -3.2 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS07265 -2.0 -6.5 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS03125 -1.9 -2.2 GMC oxidoreductase compare
MMJJ_RS06915 -1.9 -7.4 helix-turn-helix domain-containing protein compare
MMJJ_RS07345 -1.9 -5.3 homocysteine biosynthesis protein compare
MMJJ_RS06155 -1.9 -2.8 phosphatidylglycerophosphatase A compare
MMJJ_RS08615 -1.9 -6.0 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS06255 -1.9 -4.7 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06750 -1.9 -1.3 homoaconitase large subunit compare
MMJJ_RS04520 -1.9 -3.2 coenzyme F430 synthase compare
MMJJ_RS04670 -1.8 -4.1 DUF2117 domain-containing protein compare
MMJJ_RS05260 -1.8 -3.2 ATP-grasp domain-containing protein compare
MMJJ_RS03005 -1.8 -1.6 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS09085 -1.8 -7.1 minichromosome maintenance protein MCM compare
MMJJ_RS03310 -1.8 -1.8 hypothetical protein compare
MMJJ_RS06705 -1.8 -3.1 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06865 -1.8 -1.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03245 -1.8 -0.8 UMP kinase compare
MMJJ_RS06755 -1.8 -7.2 diadenylate cyclase compare
MMJJ_RS01830 -1.8 -2.5 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS05655 -1.8 -4.2 HisA/HisF family protein compare
MMJJ_RS04995 -1.8 -2.9 Tfx family DNA-binding protein compare
MMJJ_RS06835 -1.8 -5.8 4Fe-4S binding protein compare
MMJJ_RS04010 -1.8 -4.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS00415 -1.7 -3.8 DedA family protein compare
MMJJ_RS05590 -1.7 -1.6 homoserine dehydrogenase compare
MMJJ_RS05415 -1.7 -1.0 hypothetical protein compare
MMJJ_RS01415 -1.7 -1.3 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS05620 -1.7 -2.5 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS03150 -1.7 -2.8 2-phospho-L-lactate transferase compare
MMJJ_RS08010 -1.7 -3.6 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04675 -1.7 -4.3 thiamine pyrophosphate-binding protein compare
MMJJ_RS04685 -1.6 -4.8 carbamoyltransferase HypF compare
MMJJ_RS03655 -1.6 -3.4 replication factor C large subunit compare
MMJJ_RS07040 -1.6 -0.9 preprotein translocase subunit SecY compare
MMJJ_RS08330 -1.6 -1.4 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06725 -1.6 -5.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06860 -1.6 -1.5 hypothetical protein compare
MMJJ_RS06185 -1.6 -3.7 cobalamin biosynthesis protein compare
MMJJ_RS07875 -1.6 -1.2 FAD-dependent oxidoreductase compare
MMJJ_RS06855 -1.6 -0.6 DUF2104 domain-containing protein compare
MMJJ_RS04755 -1.6 -6.5 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS00210 -1.6 -1.1 DUF530 family protein compare
MMJJ_RS00425 -1.6 -1.5 hypothetical protein compare
MMJJ_RS07720 -1.6 -0.8 UPF0058 family protein compare
MMJJ_RS07245 -1.6 -2.5 amidohydrolase family protein compare
MMJJ_RS05170 -1.5 -5.2 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS08585 -1.5 -4.4 M42 family metallopeptidase compare
MMJJ_RS07840 -1.5 -1.7 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS05650 -1.5 -1.5 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS02275 -1.5 -1.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07470 -1.5 -0.8 50S ribosome-binding GTPase compare
MMJJ_RS08380 -1.5 -2.2 hypothetical protein compare
MMJJ_RS03580 -1.5 -1.3 TIGR00303 family protein compare
MMJJ_RS07955 -1.5 -6.7 ThiF family adenylyltransferase compare
MMJJ_RS03620 -1.5 -2.3 DUF2097 domain-containing protein compare
MMJJ_RS08325 -1.5 -1.6 glycosyltransferase family 2 protein compare
MMJJ_RS03490 -1.5 -1.0 ribonuclease VapC compare
MMJJ_RS01875 -1.5 -3.0 global nitrogen regulator NrpR compare
MMJJ_RS07370 -1.5 -2.5 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS01085 -1.5 -4.1 hypothetical protein compare
MMJJ_RS05420 -1.5 -1.5 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS07350 -1.5 -1.5 4Fe-4S binding protein compare
MMJJ_RS07665 -1.4 -9.0 formate dehydrogenase subunit alpha compare
MMJJ_RS04650 -1.4 -2.7 nitrogenase iron protein compare
MMJJ_RS04565 -1.4 -2.0 sirohydrochlorin nickelochelatase compare
MMJJ_RS04505 -1.4 -2.8 CDC48 family AAA ATPase compare
MMJJ_RS06660 -1.4 -4.6 DUF1188 domain-containing protein compare
MMJJ_RS06240 -1.4 -1.1 dihydropteroate synthase-like protein compare
MMJJ_RS07590 -1.4 -5.8 flap endonuclease-1 compare
MMJJ_RS05810 -1.4 -3.3 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06490 -1.4 -0.8 methanogenesis marker 2 protein compare
MMJJ_RS07670 -1.3 -7.3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS01530 -1.3 -1.4 YwbE family protein compare
MMJJ_RS07970 -1.3 -1.2 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS06480 -1.3 -4.5 hypothetical protein compare
MMJJ_RS06995 -1.3 -6.2 2-phosphoglycerate kinase compare
MMJJ_RS09030 -1.3 -6.2 hypothetical protein compare
MMJJ_RS06295 -1.3 -4.4 DUF2096 family protein compare
MMJJ_RS06210 -1.3 -4.1 hypothetical protein compare
MMJJ_RS00235 -1.3 -7.3 hypothetical protein compare
MMJJ_RS03200 -1.3 -0.9 uroporphyrinogen-III synthase compare
MMJJ_RS04415 -1.3 -1.9 hypothetical protein compare
MMJJ_RS01365 -1.3 -4.2 Mrp/NBP35 family ATP-binding protein compare
MMJJ_RS04110 -1.3 -3.4 hypothetical protein compare
MMJJ_RS04180 -1.3 -1.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS00785 -1.3 -1.5 hypothetical protein compare
MMJJ_RS05710 -1.3 -1.7 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS07505 -1.3 -0.6 DNA-directed RNA polymerase subunit K compare
MMJJ_RS08175 -1.3 -4.6 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06940 -1.3 -4.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03845 -1.2 -2.2 translation initiation factor IF-2 compare
MMJJ_RS07960 -1.2 -1.6 quinolinate synthase NadA compare
MMJJ_RS03765 -1.2 -3.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Sodium selenate across organisms