Experiment set7S436 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Rifampicin 0.25 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04970 -4.8 -1.3 DUF655 domain-containing protein compare
MMJJ_RS07715 -4.6 -1.6 UbiD family decarboxylase compare
MMJJ_RS05770 -4.5 -1.3 flagellar protein D compare
MMJJ_RS02040 -4.3 -1.4 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS04485 -4.2 -6.2 riboflavin synthase compare
MMJJ_RS09095 -4.1 -8.5 MMPL family transporter compare
MMJJ_RS00050 -4.0 -9.0 AAA family ATPase compare
MMJJ_RS03490 -4.0 -1.5 ribonuclease VapC compare
MMJJ_RS03350 -4.0 -1.7 hypothetical protein compare
MMJJ_RS00055 -3.9 -8.4 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS06875 -3.9 -1.1 hypothetical protein compare
MMJJ_RS03865 -3.9 -0.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS05575 -3.8 -2.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS06930 -3.7 -1.2 type II methionyl aminopeptidase compare
MMJJ_RS00210 -3.7 -1.1 DUF530 family protein compare
MMJJ_RS06695 -3.7 -1.3 amidohydrolase compare
MMJJ_RS03095 -3.6 -1.2 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS06375 -3.6 -2.4 UbiX family flavin prenyltransferase compare
MMJJ_RS00065 -3.6 -9.1 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS09100 -3.6 -11.0 COG1361 S-layer family protein compare
MMJJ_RS05995 -3.6 -1.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS03115 -3.6 -4.7 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS09175 -3.6 -0.7 anthranilate synthase component I compare
MMJJ_RS05535 -3.5 -11.9 hypothetical protein compare
MMJJ_RS02045 -3.5 -1.6 molybdenum cofactor guanylyltransferase compare
MMJJ_RS05935 -3.5 -1.0 Era-like GTP-binding protein compare
MMJJ_RS04750 -3.5 -8.5 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS06180 -3.5 -1.8 tryptophan--tRNA ligase compare
MMJJ_RS00215 -3.4 -1.1 CCA tRNA nucleotidyltransferase compare
MMJJ_RS00195 -3.4 -1.4 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS03270 -3.4 -1.2 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS03875 -3.4 -1.9 CBS domain-containing protein compare
MMJJ_RS08795 -3.4 -1.2 phosphoglucosamine mutase compare
MMJJ_RS04050 -3.4 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS04655 -3.4 -5.2 FAD-dependent oxidoreductase compare
MMJJ_RS00580 -3.3 -0.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00060 -3.3 -14.4 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS07245 -3.3 -2.5 amidohydrolase family protein compare
MMJJ_RS04800 -3.3 -3.1 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS00370 -3.3 -1.2 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS04475 -3.3 -2.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS00040 -3.3 -6.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS00360 -3.2 -1.1 adenosylhomocysteinase compare
MMJJ_RS07190 -3.2 -2.6 RtcB family protein compare
MMJJ_RS00125 -3.2 -1.1 KEOPS complex subunit Cgi121 compare
MMJJ_RS03920 -3.2 -11.9 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS05070 -3.2 -0.9 DNA primase catalytic subunit PriS compare
MMJJ_RS01875 -3.2 -4.3 global nitrogen regulator NrpR compare
MMJJ_RS00475 -3.2 -1.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS04700 -3.1 -2.9 deoxyhypusine synthase compare
MMJJ_RS04760 -3.1 -14.4 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS09295 -3.1 -0.6 hypothetical protein compare
MMJJ_RS03765 -3.0 -5.4 hypothetical protein compare
MMJJ_RS01530 -3.0 -2.3 YwbE family protein compare
MMJJ_RS05280 -3.0 -0.6 hypothetical protein compare
MMJJ_RS06380 -3.0 -1.3 signal recognition particle protein Srp54 compare
MMJJ_RS00045 -3.0 -12.1 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00035 -3.0 -13.8 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07415 -3.0 -1.9 polyprenyl diphosphate synthase compare
MMJJ_RS08625 -3.0 -4.7 magnesium/cobalt transporter CorA compare
MMJJ_RS06660 -3.0 -6.2 DUF1188 domain-containing protein compare
MMJJ_RS00935 -2.9 -11.4 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS01750 -2.9 -0.9 ferrous iron transport protein A compare
MMJJ_RS08320 -2.9 -1.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS05445 -2.9 -0.8 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS01355 -2.9 -1.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03110 -2.9 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS09190 -2.9 -0.7 tryptophan synthase subunit beta compare
MMJJ_RS00430 -2.9 -1.4 ribonuclease Z compare
MMJJ_RS06110 -2.9 -0.9 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS02200 -2.9 -5.8 chorismate pyruvate-lyase family protein compare
MMJJ_RS00600 -2.9 -1.6 hydroxymethylbilane synthase compare
MMJJ_RS03965 -2.9 -1.1 DNA-directed RNA polymerase subunit L compare
MMJJ_RS05930 -2.8 -0.8 cell division protein SepF compare
MMJJ_RS06250 -2.8 -1.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08430 -2.8 -4.8 small nuclear ribonucleoprotein compare
MMJJ_RS00415 -2.8 -6.0 DedA family protein compare
MMJJ_RS07030 -2.8 -15.6 hypothetical protein compare
MMJJ_RS00080 -2.8 -12.3 DUF166 domain-containing protein compare
MMJJ_RS05415 -2.8 -0.8 hypothetical protein compare
MMJJ_RS03245 -2.8 -0.7 UMP kinase compare
MMJJ_RS03160 -2.8 -11.0 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS04755 -2.8 -9.1 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS08335 -2.8 -1.0 ABC transporter ATP-binding protein compare
MMJJ_RS00285 -2.8 -10.5 UPF0254 family protein compare
MMJJ_RS07000 -2.8 -0.7 TrkH family potassium uptake protein compare
MMJJ_RS07950 -2.8 -1.3 4Fe-4S binding protein compare
MMJJ_RS08020 -2.7 -6.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03895 -2.7 -1.3 hydrogenase expression/formation protein HypE compare
MMJJ_RS04995 -2.7 -4.0 Tfx family DNA-binding protein compare
MMJJ_RS03060 -2.7 -0.9 methanogenesis marker 7 protein compare
MMJJ_RS06915 -2.7 -10.3 helix-turn-helix domain-containing protein compare
MMJJ_RS00075 -2.6 -9.2 AAA family ATPase compare
MMJJ_RS01415 -2.6 -0.9 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS09055 -2.6 -7.6 NFACT family protein compare
MMJJ_RS06940 -2.6 -8.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05780 -2.6 -1.6 flagellin compare
MMJJ_RS01200 -2.6 -1.0 PRC-barrel domain-containing protein compare
MMJJ_RS09085 -2.6 -8.8 minichromosome maintenance protein MCM compare
MMJJ_RS05490 -2.6 -1.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS07955 -2.6 -7.2 ThiF family adenylyltransferase compare
MMJJ_RS08660 -2.6 -1.9 acetylornithine transaminase compare
MMJJ_RS05360 -2.6 -4.5 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS08535 -2.5 -2.1 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS07410 -2.5 -2.0 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS00570 -2.5 -0.9 ribonuclease P compare
MMJJ_RS07705 -2.5 -1.0 GTP-binding protein EngB compare
MMJJ_RS06860 -2.5 -1.8 hypothetical protein compare
MMJJ_RS06485 -2.5 -1.3 phosphoglycerate kinase compare
MMJJ_RS00355 -2.5 -1.8 ribonuclease P protein component 4 compare
MMJJ_RS08060 -2.5 -6.4 DNA repair and recombination protein RadA compare
MMJJ_RS08500 -2.5 -4.4 L-sulfolactate dehydrogenase compare
MMJJ_RS06175 -2.5 -1.3 DUF1743 domain-containing protein compare
MMJJ_RS08010 -2.5 -6.3 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04200 -2.5 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03580 -2.5 -0.9 TIGR00303 family protein compare
MMJJ_RS06835 -2.5 -9.0 4Fe-4S binding protein compare
MMJJ_RS08325 -2.5 -1.5 glycosyltransferase family 2 protein compare
MMJJ_RS07505 -2.4 -0.6 DNA-directed RNA polymerase subunit K compare
MMJJ_RS03840 -2.4 -1.2 DHH family phosphoesterase compare
MMJJ_RS06255 -2.4 -5.0 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06910 -2.4 -1.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS00450 -2.4 -1.0 DUF126 domain-containing protein compare
MMJJ_RS00645 -2.4 -8.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS07470 -2.4 -0.9 50S ribosome-binding GTPase compare
MMJJ_RS07975 -2.4 -6.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS07785 -2.4 -1.1 fumarate reductase subunit A compare
MMJJ_RS08840 -2.4 -2.5 calcium/sodium antiporter compare
MMJJ_RS03815 -2.3 -0.9 nascent polypeptide-associated complex protein compare
MMJJ_RS03660 -2.3 -1.6 DUF447 family protein compare
MMJJ_RS04720 -2.3 -1.3 IMP dehydrogenase compare
MMJJ_RS04730 -2.3 -1.1 tyrosine decarboxylase MfnA compare
MMJJ_RS06665 -2.3 -5.4 DUF3236 domain-containing protein compare
MMJJ_RS07360 -2.3 -0.9 TIGR00269 family protein compare
MMJJ_RS02090 -2.3 -2.4 tyramine--L-glutamate ligase compare
MMJJ_RS07720 -2.3 -0.8 UPF0058 family protein compare
MMJJ_RS03190 -2.3 -1.5 phosphopyruvate hydratase compare
MMJJ_RS03170 -2.2 -4.9 DUF5612 domain-containing protein compare
MMJJ_RS06155 -2.2 -2.6 phosphatidylglycerophosphatase A compare
MMJJ_RS05380 -2.2 -0.9 hypothetical protein compare
MMJJ_RS06260 -2.2 -5.0 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS09405 -2.2 -2.9 hypothetical protein compare
MMJJ_RS03230 -2.2 -2.0 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06390 -2.2 -0.8 NADPH-dependent F420 reductase compare
MMJJ_RS09265 -2.2 -2.0 hypothetical protein compare
MMJJ_RS03930 -2.1 -9.8 hypothetical protein compare
MMJJ_RS06935 -2.1 -6.8 GTP-binding protein compare
MMJJ_RS08330 -2.1 -0.8 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01880 -2.1 -1.7 RlmE family RNA methyltransferase compare
MMJJ_RS07155 -2.1 -7.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01690 -2.1 -1.2 methanogenesis marker 12 protein compare
MMJJ_RS09130 -2.1 -0.8 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS08715 -2.1 -5.0 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS02935 -2.1 -1.9 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS07035 -2.1 -1.1 glycosyl transferase compare
MMJJ_RS07425 -2.1 -6.9 MBL fold metallo-hydrolase compare
MMJJ_RS05155 -2.1 -2.9 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS02855 -2.1 -4.8 DEAD/DEAH box helicase compare
MMJJ_RS03150 -2.0 -3.0 2-phospho-L-lactate transferase compare
MMJJ_RS05710 -2.0 -2.9 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS05720 -2.0 -1.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS06725 -2.0 -7.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS07960 -2.0 -1.6 quinolinate synthase NadA compare
MMJJ_RS00550 -2.0 -6.0 AIR synthase-related protein compare
MMJJ_RS08785 -2.0 -6.1 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS00345 -1.9 -6.1 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS05170 -1.9 -7.4 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS01865 -1.9 -3.0 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07265 -1.9 -5.9 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS01360 -1.9 -0.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS03655 -1.9 -2.3 replication factor C large subunit compare
MMJJ_RS03785 -1.9 -1.2 hypothetical protein compare
MMJJ_RS00275 -1.9 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS01830 -1.9 -2.1 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS07350 -1.9 -1.6 4Fe-4S binding protein compare
MMJJ_RS08080 -1.9 -5.9 TIGR00300 family protein compare
MMJJ_RS03140 -1.9 -5.9 tRNA-dihydrouridine synthase compare
MMJJ_RS04010 -1.9 -4.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS09035 -1.9 -2.5 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS01475 -1.9 -0.5 signal recognition particle-docking protein FtsY compare
MMJJ_RS02035 -1.9 -3.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS08780 -1.8 -4.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS06200 -1.8 -1.1 phosphoglycerate dehydrogenase compare
MMJJ_RS06705 -1.8 -1.5 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS08490 -1.8 -2.4 rubrerythrin family protein compare
MMJJ_RS07590 -1.8 -6.3 flap endonuclease-1 compare
MMJJ_RS06760 -1.8 -2.5 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS08340 -1.8 -3.0 archaeoflavoprotein AfpA compare
MMJJ_RS08765 -1.8 -9.1 glycosyltransferase family 9 protein compare
MMJJ_RS06625 -1.8 -0.6 pyruvate synthase subunit PorB compare
MMJJ_RS03820 -1.8 -1.3 hydrogenase formation protein HypD compare
MMJJ_RS06040 -1.8 -1.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS01410 -1.8 -4.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS04180 -1.7 -1.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03135 -1.7 -3.6 CBS domain-containing protein compare
MMJJ_RS05655 -1.7 -4.0 HisA/HisF family protein compare
MMJJ_RS08585 -1.7 -3.9 M42 family metallopeptidase compare
MMJJ_RS04685 -1.7 -4.4 carbamoyltransferase HypF compare
MMJJ_RS08825 -1.7 -3.3 hypothetical protein compare
MMJJ_RS06880 -1.7 -0.5 EhaG family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Rifampicin across organisms