Experiment set7S435 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete deta nonoate 0.025 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS01280 -6.0 -18.5 hydroxylamine reductase compare
MMJJ_RS01275 -5.7 -7.6 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS01270 -5.5 -12.2 4Fe-4S binding protein compare
MMJJ_RS02040 -4.5 -1.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00570 -4.5 -1.4 ribonuclease P compare
MMJJ_RS00425 -4.5 -3.2 hypothetical protein compare
MMJJ_RS06180 -4.5 -2.3 tryptophan--tRNA ligase compare
MMJJ_RS04975 -4.4 -1.8 glycosyltransferase family 4 protein compare
MMJJ_RS02045 -4.4 -1.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06220 -4.4 -4.8 polyamine aminopropyltransferase compare
MMJJ_RS03225 -4.4 -1.9 4Fe-4S binding protein compare
MMJJ_RS01285 -4.3 -5.6 CopG family ribbon-helix-helix protein compare
MMJJ_RS05575 -4.2 -3.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS05770 -4.1 -2.3 flagellar protein D compare
MMJJ_RS03965 -4.1 -1.2 DNA-directed RNA polymerase subunit L compare
MMJJ_RS05155 -4.1 -4.4 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS09035 -4.0 -6.4 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS08625 -4.0 -2.8 magnesium/cobalt transporter CorA compare
MMJJ_RS05535 -4.0 -13.8 hypothetical protein compare
MMJJ_RS06695 -4.0 -1.9 amidohydrolase compare
MMJJ_RS06860 -3.9 -2.0 hypothetical protein compare
MMJJ_RS09375 -3.8 -1.2 hypothetical protein compare
MMJJ_RS04200 -3.8 -2.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03110 -3.8 -2.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS03230 -3.8 -3.0 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08320 -3.8 -1.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS00270 -3.7 -2.6 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS08430 -3.7 -6.4 small nuclear ribonucleoprotein compare
MMJJ_RS07035 -3.7 -1.5 glycosyl transferase compare
MMJJ_RS09175 -3.7 -0.9 anthranilate synthase component I compare
MMJJ_RS07350 -3.7 -2.6 4Fe-4S binding protein compare
MMJJ_RS03200 -3.7 -1.5 uroporphyrinogen-III synthase compare
MMJJ_RS08840 -3.6 -3.2 calcium/sodium antiporter compare
MMJJ_RS00580 -3.6 -1.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07410 -3.6 -2.1 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04730 -3.6 -1.7 tyrosine decarboxylase MfnA compare
MMJJ_RS05360 -3.6 -5.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS05070 -3.6 -1.4 DNA primase catalytic subunit PriS compare
MMJJ_RS01865 -3.5 -4.6 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS00125 -3.5 -1.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS06375 -3.5 -3.5 UbiX family flavin prenyltransferase compare
MMJJ_RS03095 -3.5 -2.0 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS01830 -3.5 -3.2 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS02200 -3.4 -6.9 chorismate pyruvate-lyase family protein compare
MMJJ_RS03815 -3.3 -1.2 nascent polypeptide-associated complex protein compare
MMJJ_RS05445 -3.3 -1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06915 -3.3 -11.8 helix-turn-helix domain-containing protein compare
MMJJ_RS00210 -3.3 -1.8 DUF530 family protein compare
MMJJ_RS01750 -3.2 -1.4 ferrous iron transport protein A compare
MMJJ_RS06785 -3.2 -7.1 RNA ligase partner protein compare
MMJJ_RS05415 -3.2 -1.3 hypothetical protein compare
MMJJ_RS06750 -3.2 -1.3 homoaconitase large subunit compare
MMJJ_RS08020 -3.2 -7.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04970 -3.2 -1.8 DUF655 domain-containing protein compare
MMJJ_RS02090 -3.1 -3.5 tyramine--L-glutamate ligase compare
MMJJ_RS05280 -3.1 -0.8 hypothetical protein compare
MMJJ_RS03310 -3.1 -2.5 hypothetical protein compare
MMJJ_RS01765 -3.1 -9.0 winged helix-turn-helix domain-containing protein compare
MMJJ_RS03190 -3.1 -2.1 phosphopyruvate hydratase compare
MMJJ_RS03875 -3.1 -2.9 CBS domain-containing protein compare
MMJJ_RS04700 -3.1 -5.5 deoxyhypusine synthase compare
MMJJ_RS07950 -3.0 -2.2 4Fe-4S binding protein compare
MMJJ_RS03865 -3.0 -1.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS05765 -3.0 -1.1 flagellar protein E compare
MMJJ_RS04475 -3.0 -3.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS00050 -3.0 -9.1 AAA family ATPase compare
MMJJ_RS05590 -2.9 -2.3 homoserine dehydrogenase compare
MMJJ_RS07785 -2.9 -1.4 fumarate reductase subunit A compare
MMJJ_RS01820 -2.9 -3.6 MJ1244 family protein compare
MMJJ_RS08490 -2.9 -3.3 rubrerythrin family protein compare
MMJJ_RS04800 -2.9 -5.5 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03150 -2.9 -4.3 2-phospho-L-lactate transferase compare
MMJJ_RS04655 -2.9 -6.5 FAD-dependent oxidoreductase compare
MMJJ_RS07245 -2.9 -4.3 amidohydrolase family protein compare
MMJJ_RS08340 -2.9 -4.6 archaeoflavoprotein AfpA compare
MMJJ_RS06930 -2.8 -1.9 type II methionyl aminopeptidase compare
MMJJ_RS07705 -2.8 -1.5 GTP-binding protein EngB compare
MMJJ_RS05995 -2.8 -1.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS03840 -2.8 -1.9 DHH family phosphoesterase compare
MMJJ_RS00355 -2.8 -2.8 ribonuclease P protein component 4 compare
MMJJ_RS02920 -2.8 -1.4 30S ribosomal protein S27ae compare
MMJJ_RS03140 -2.8 -7.9 tRNA-dihydrouridine synthase compare
MMJJ_RS07945 -2.8 -1.8 4Fe-4S binding protein compare
MMJJ_RS04485 -2.8 -6.3 riboflavin synthase compare
MMJJ_RS04150 -2.8 -2.8 DUF5379 domain-containing protein compare
MMJJ_RS05560 -2.8 -4.4 30S ribosomal protein S27e compare
MMJJ_RS03270 -2.8 -1.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS03820 -2.7 -1.7 hydrogenase formation protein HypD compare
MMJJ_RS05780 -2.7 -2.9 flagellin compare
MMJJ_RS06255 -2.7 -6.9 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06625 -2.7 -1.0 pyruvate synthase subunit PorB compare
MMJJ_RS04505 -2.7 -6.2 CDC48 family AAA ATPase compare
MMJJ_RS00215 -2.7 -1.9 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03620 -2.7 -3.5 DUF2097 domain-containing protein compare
MMJJ_RS03660 -2.7 -2.2 DUF447 family protein compare
MMJJ_RS05810 -2.7 -4.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS00035 -2.6 -14.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS08500 -2.6 -6.0 L-sulfolactate dehydrogenase compare
MMJJ_RS07005 -2.6 -3.7 transcription factor S compare
MMJJ_RS08010 -2.6 -6.5 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS00195 -2.6 -3.2 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS09055 -2.6 -8.9 NFACT family protein compare
MMJJ_RS05610 -2.6 -3.5 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03125 -2.5 -2.6 GMC oxidoreductase compare
MMJJ_RS06910 -2.5 -1.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06855 -2.5 -0.8 DUF2104 domain-containing protein compare
MMJJ_RS01810 -2.5 -1.5 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS05065 -2.5 -2.3 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04685 -2.5 -6.0 carbamoyltransferase HypF compare
MMJJ_RS08660 -2.5 -2.8 acetylornithine transaminase compare
MMJJ_RS00430 -2.5 -2.0 ribonuclease Z compare
MMJJ_RS06240 -2.5 -1.5 dihydropteroate synthase-like protein compare
MMJJ_RS06215 -2.5 -3.7 agmatinase compare
MMJJ_RS03005 -2.5 -1.4 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS00370 -2.5 -1.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS01875 -2.4 -6.1 global nitrogen regulator NrpR compare
MMJJ_RS01290 -2.4 -6.8 hypothetical protein compare
MMJJ_RS07655 -2.4 -10.2 hypothetical protein compare
MMJJ_RS05930 -2.4 -1.3 cell division protein SepF compare
MMJJ_RS09190 -2.4 -1.0 tryptophan synthase subunit beta compare
MMJJ_RS06175 -2.4 -1.6 DUF1743 domain-containing protein compare
MMJJ_RS00040 -2.4 -6.0 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS07155 -2.4 -9.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS03765 -2.4 -4.9 hypothetical protein compare
MMJJ_RS00275 -2.4 -1.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS05190 -2.4 -6.0 gamma carbonic anhydrase family protein compare
MMJJ_RS05710 -2.4 -4.1 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS03895 -2.3 -1.8 hydrogenase expression/formation protein HypE compare
MMJJ_RS01200 -2.3 -2.0 PRC-barrel domain-containing protein compare
MMJJ_RS08080 -2.3 -6.3 TIGR00300 family protein compare
MMJJ_RS00080 -2.3 -10.9 DUF166 domain-containing protein compare
MMJJ_RS07265 -2.3 -8.4 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS07585 -2.3 -8.7 DHH family phosphoesterase compare
MMJJ_RS00045 -2.3 -11.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS06155 -2.3 -4.2 phosphatidylglycerophosphatase A compare
MMJJ_RS03995 -2.3 -6.2 PHP domain-containing protein compare
MMJJ_RS00060 -2.3 -12.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS07380 -2.2 -6.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS06725 -2.2 -9.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS03615 -2.2 -1.8 cobalt-precorrin-8 methylmutase compare
MMJJ_RS01360 -2.2 -1.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS00560 -2.2 -2.2 homoisocitrate dehydrogenase compare
MMJJ_RS03155 -2.2 -9.2 hypothetical protein compare
MMJJ_RS06995 -2.2 -9.0 2-phosphoglycerate kinase compare
MMJJ_RS08155 -2.2 -2.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS01935 -2.2 -2.1 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS03760 -2.2 -1.2 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS07630 -2.2 -8.6 hypothetical protein compare
MMJJ_RS00065 -2.2 -6.7 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS01410 -2.2 -5.5 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS00265 -2.1 -5.2 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS01355 -2.1 -2.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01960 -2.1 -5.4 glycosyltransferase family 2 protein compare
MMJJ_RS04995 -2.1 -4.2 Tfx family DNA-binding protein compare
MMJJ_RS07190 -2.1 -3.2 RtcB family protein compare
MMJJ_RS08535 -2.1 -2.3 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS08795 -2.1 -1.9 phosphoglucosamine mutase compare
MMJJ_RS04575 -2.1 -7.0 DUF116 domain-containing protein compare
MMJJ_RS00055 -2.1 -7.7 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS03670 -2.0 -2.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS01755 -2.0 -1.0 ferrous iron transport protein B compare
MMJJ_RS00475 -2.0 -1.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS07345 -2.0 -6.0 homocysteine biosynthesis protein compare
MMJJ_RS01350 -2.0 -4.8 sodium:proton antiporter compare
MMJJ_RS08825 -2.0 -2.8 hypothetical protein compare
MMJJ_RS06510 -2.0 -0.9 LL-diaminopimelate aminotransferase compare
MMJJ_RS06250 -2.0 -1.6 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS00075 -2.0 -7.9 AAA family ATPase compare
MMJJ_RS03170 -2.0 -3.9 DUF5612 domain-containing protein compare
MMJJ_RS08620 -2.0 -3.1 DUF373 family protein compare
MMJJ_RS03710 -2.0 -5.3 DUF2111 domain-containing protein compare
MMJJ_RS01475 -2.0 -1.1 signal recognition particle-docking protein FtsY compare
MMJJ_RS08005 -2.0 -10.5 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS06885 -1.9 -1.5 EhaF family protein compare
MMJJ_RS04790 -1.9 -2.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS08055 -1.9 -3.8 methanogenesis marker 14 protein compare
MMJJ_RS00205 -1.9 -3.3 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS04980 -1.9 -3.2 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04010 -1.9 -4.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS07430 -1.9 -2.1 ribonuclease VapC compare
MMJJ_RS08175 -1.8 -6.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06880 -1.8 -0.8 EhaG family protein compare
MMJJ_RS05620 -1.8 -2.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS06490 -1.8 -0.9 methanogenesis marker 2 protein compare
MMJJ_RS05950 -1.8 -1.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS02855 -1.8 -6.1 DEAD/DEAH box helicase compare
MMJJ_RS06875 -1.8 -2.1 hypothetical protein compare
MMJJ_RS08330 -1.8 -1.5 SufD family Fe-S cluster assembly protein compare
MMJJ_RS04770 -1.8 -2.3 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS06170 -1.8 -6.3 hypothetical protein compare
MMJJ_RS05650 -1.8 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS00450 -1.8 -1.3 DUF126 domain-containing protein compare
MMJJ_RS06835 -1.7 -7.9 4Fe-4S binding protein compare
MMJJ_RS03880 -1.7 -9.0 TraB/GumN family protein compare
MMJJ_RS03430 -1.7 -3.6 winged helix-turn-helix domain-containing protein compare
MMJJ_RS04965 -1.7 -3.1 RNA polymerase Rpb4 family protein compare
MMJJ_RS05330 -1.7 -1.1 DNA polymerase II large subunit compare
MMJJ_RS01500 -1.7 -4.7 transcriptional regulator compare
MMJJ_RS03195 -1.7 -4.1 hypothetical protein compare
MMJJ_RS07720 -1.7 -0.9 UPF0058 family protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress deta nonoate in Methanococcus maripaludis JJ

For stress deta nonoate across organisms